RNA–Protein interactions for RNA: ENST00000420316.6

EGFR-204, Transcript of epidermal growth factor receptor, humanhuman

TSL 1 (best) BASIC

Gene EGFR, Length 1,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-204ENST00000420316 CDCA7LQ96GN5 454 aa26.37■■□□□ 1.81
EGFR-204ENST00000420316 STARD3NLO95772 234 aa26.37■■□□□ 1.81
EGFR-204ENST00000420316 CRKLP46109 303 aaKnown RBP26.37■■□□□ 1.81
EGFR-204ENST00000420316 IL16Q14005 1332 aa26.36■■□□□ 1.81
EGFR-204ENST00000420316 ELL2O00472 640 aaPredicted RBP26.36■■□□□ 1.81
EGFR-204ENST00000420316 PIP4K2AP48426 406 aaPredicted RBP26.36■■□□□ 1.81
EGFR-204ENST00000420316 FLAD1Q8NFF5 587 aa26.36■■□□□ 1.81
EGFR-204ENST00000420316 GIGYF1O75420 1035 aaPredicted RBP26.35■■□□□ 1.81
EGFR-204ENST00000420316 PNPLA7Q6ZV29 1317 aa26.35■■□□□ 1.81
EGFR-204ENST00000420316 FANCIQ9NVI1 1328 aa26.35■■□□□ 1.81
EGFR-204ENST00000420316 GNPATO15228 680 aa26.34■■□□□ 1.81
EGFR-204ENST00000420316 INTS5Q6P9B9 1019 aaKnown RBP26.34■■□□□ 1.81
EGFR-204ENST00000420316 NECTIN2Q92692 538 aa26.34■■□□□ 1.81
EGFR-204ENST00000420316 YTHDC1Q96MU7 727 aaKnown RBP26.34■■□□□ 1.81
EGFR-204ENST00000420316 RPS6KA4O75676 772 aa26.33■■□□□ 1.81
EGFR-204ENST00000420316 A1BGP04217 495 aa26.33■■□□□ 1.81
EGFR-204ENST00000420316 SSFA2P28290 1259 aa26.33■■□□□ 1.81
EGFR-204ENST00000420316 GOLGA2Q08379 1002 aa26.33■■□□□ 1.81
EGFR-204ENST00000420316 CCDC87Q9NVE4 849 aa26.33■■□□□ 1.81
EGFR-204ENST00000420316 RTCBQ9Y3I0 505 aaKnown RBP26.33■■□□□ 1.81
EGFR-204ENST00000420316 PHF14O94880 888 aa26.33■■□□□ 1.8
EGFR-204ENST00000420316 C8orf58Q8NAV2 365 aa26.33■■□□□ 1.8
EGFR-204ENST00000420316 PDGFDQ9GZP0 370 aaPredicted RBP26.33■■□□□ 1.8
EGFR-204ENST00000420316 UBR3Q6ZT12 1888 aa26.32■■□□□ 1.8
EGFR-204ENST00000420316 LAMB4A4D0S4 1761 aa26.32■■□□□ 1.8
EGFR-204ENST00000420316 TSPYL6Q8N831 410 aa26.32■■□□□ 1.8
EGFR-204ENST00000420316 ZBTB1Q9Y2K1 713 aa26.32■■□□□ 1.8
EGFR-204ENST00000420316 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.31■■□□□ 1.8
EGFR-204ENST00000420316 EIF2S2P20042 333 aaKnown RBP26.31■■□□□ 1.8
EGFR-204ENST00000420316 CANXP27824 592 aaKnown RBP26.31■■□□□ 1.8
EGFR-204ENST00000420316 COL23A1Q86Y22 540 aaPredicted RBP26.31■■□□□ 1.8
EGFR-204ENST00000420316 DUSP27Q5VZP5 1158 aa26.3■■□□□ 1.8
EGFR-204ENST00000420316 SLC16A10Q8TF71 515 aa26.3■■□□□ 1.8
EGFR-204ENST00000420316 ADRA2BP18089 450 aa26.29■■□□□ 1.8
EGFR-204ENST00000420316 QSER1Q2KHR3 1735 aa26.29■■□□□ 1.8
EGFR-204ENST00000420316 EXOSC9Q06265 439 aaKnown RBP26.29■■□□□ 1.8
EGFR-204ENST00000420316 SLFN5Q08AF3 891 aa26.29■■□□□ 1.8
EGFR-204ENST00000420316 TRAPPC3LQ5T215 181 aa26.28■■□□□ 1.8
EGFR-204ENST00000420316 ZNF330Q9Y3S2 320 aaPredicted RBP26.28■■□□□ 1.8
EGFR-204ENST00000420316 MYH16Q9H6N6 1097 aa26.27■■□□□ 1.8
EGFR-204ENST00000420316 MSH5O43196 834 aa26.26■■□□□ 1.79
EGFR-204ENST00000420316 E9PSI1 815 aa26.25■■□□□ 1.79
EGFR-204ENST00000420316 ANXA1P04083 346 aa26.25■■□□□ 1.79
EGFR-204ENST00000420316 SOS1Q07889 1333 aaPredicted RBP26.25■■□□□ 1.79
EGFR-204ENST00000420316 CASZ1Q86V15 1759 aa26.25■■□□□ 1.79
EGFR-204ENST00000420316 NBPF26B4DH59 902 aa26.24■■□□□ 1.79
EGFR-204ENST00000420316 NBPF10Q6P3W6 841 aaKnown RBP26.24■■□□□ 1.79
EGFR-204ENST00000420316 NBPF15Q8N660 670 aa26.24■■□□□ 1.79
EGFR-204ENST00000420316 ARHGEF1Q92888 912 aaKnown RBP26.24■■□□□ 1.79
EGFR-204ENST00000420316 MTFR1LQ9H019 292 aa26.24■■□□□ 1.79
EGFR-204ENST00000420316 SRCAPQ6ZRS2 3230 aa26.24■■□□□ 1.79
EGFR-204ENST00000420316 TCERG1O14776 1098 aaKnown RBP26.24■■□□□ 1.79
EGFR-204ENST00000420316 ZBED9Q6R2W3 1325 aa26.24■■□□□ 1.79
EGFR-204ENST00000420316 HOXB7P09629 217 aa26.23■■□□□ 1.79
EGFR-204ENST00000420316 MYL6BP14649 208 aa26.23■■□□□ 1.79
EGFR-204ENST00000420316 IL6STP40189 918 aaPredicted RBP26.23■■□□□ 1.79
EGFR-204ENST00000420316 EIF5P55010 431 aaKnown RBP26.23■■□□□ 1.79
EGFR-204ENST00000420316 ZBTB7AO95365 584 aa26.22■■□□□ 1.79
EGFR-204ENST00000420316 TWISTNBQ3B726 338 aaPredicted RBP26.22■■□□□ 1.79
EGFR-204ENST00000420316 HDGFL1Q5TGJ6 251 aa26.22■■□□□ 1.79
EGFR-204ENST00000420316 RFC4P35249 363 aa26.21■■□□□ 1.79
EGFR-204ENST00000420316 PROSER3Q2NL68 480 aa26.21■■□□□ 1.79
EGFR-204ENST00000420316 SPON1Q9HCB6 807 aa26.21■■□□□ 1.79
EGFR-204ENST00000420316 C4AP0C0L4 1744 aa26.2■■□□□ 1.78
EGFR-204ENST00000420316 TRMT2AQ8IZ69 625 aaKnown RBP26.2■■□□□ 1.78
EGFR-204ENST00000420316 ARXQ96QS3 562 aa26.2■■□□□ 1.78
EGFR-204ENST00000420316 ERBB4Q15303 1308 aa26.19■■□□□ 1.78
EGFR-204ENST00000420316 CHPF2Q9P2E5 772 aa26.19■■□□□ 1.78
EGFR-204ENST00000420316 SRP68Q9UHB9 627 aaKnown RBP26.19■■□□□ 1.78
EGFR-204ENST00000420316 COL15A1P39059 1388 aa26.18■■□□□ 1.78
EGFR-204ENST00000420316 A0A087WZG4 1122 aa26.18■■□□□ 1.78
EGFR-204ENST00000420316 PDIA6Q15084 440 aa26.18■■□□□ 1.78
EGFR-204ENST00000420316 NPM2Q86SE8 214 aaKnown RBP26.18■■□□□ 1.78
EGFR-204ENST00000420316 ATF5Q9Y2D1 282 aaPredicted RBP26.18■■□□□ 1.78
EGFR-204ENST00000420316 VAMP4O75379 141 aa26.16■■□□□ 1.78
EGFR-204ENST00000420316 TBC1D2BQ9UPU7 963 aa26.16■■□□□ 1.78
EGFR-204ENST00000420316 MSL1Q68DK7 614 aa26.16■■□□□ 1.78
EGFR-204ENST00000420316 NARFQ9UHQ1 456 aa26.16■■□□□ 1.78
EGFR-204ENST00000420316 USP42Q9H9J4 1324 aaKnown RBP26.15■■□□□ 1.78
EGFR-204ENST00000420316 CHMP4AQ9BY43 222 aa26.15■■□□□ 1.78
EGFR-204ENST00000420316 ZPR1O75312 459 aa26.14■■□□□ 1.78
EGFR-204ENST00000420316 GYS1P13807 737 aa26.13■■□□□ 1.77
EGFR-204ENST00000420316 PTGER2P43116 358 aa26.13■■□□□ 1.77
EGFR-204ENST00000420316 NLGN1Q8N2Q7 840 aa26.13■■□□□ 1.77
EGFR-204ENST00000420316 SGIP1Q9BQI5 828 aa26.13■■□□□ 1.77
EGFR-204ENST00000420316 AIMP1Q12904 312 aaKnown RBP26.12■■□□□ 1.77
EGFR-204ENST00000420316 TTLL7Q6ZT98 887 aa26.12■■□□□ 1.77
EGFR-204ENST00000420316 DDX21Q9NR30 783 aaKnown RBP eCLIP26.12■■□□□ 1.77
EGFR-204ENST00000420316 USPL1Q5W0Q7 1092 aa26.12■■□□□ 1.77
EGFR-204ENST00000420316 LRP10Q7Z4F1 713 aa26.12■■□□□ 1.77
EGFR-204ENST00000420316 CCDC30Q5VVM6 783 aa26.11■■□□□ 1.77
EGFR-204ENST00000420316 DZIP3Q86Y13 1208 aaKnown RBP26.11■■□□□ 1.77
EGFR-204ENST00000420316 POLD1P28340 1107 aa26.1■■□□□ 1.77
EGFR-204ENST00000420316 PHAXQ9H814 394 aaKnown RBP26.1■■□□□ 1.77
EGFR-204ENST00000420316 DBF4Q9UBU7 674 aaPredicted RBP26.1■■□□□ 1.77
EGFR-204ENST00000420316 XAGE3Q8WTP9 111 aa26.09■■□□□ 1.77
EGFR-204ENST00000420316 COPS6Q7L5N1 327 aa26.07■■□□□ 1.76
EGFR-204ENST00000420316 BCL2L12Q9HB09 334 aa26.07■■□□□ 1.76
EGFR-204ENST00000420316 LRP5O75197 1615 aa26.07■■□□□ 1.76
EGFR-204ENST00000420316 FKBP8Q14318 412 aa26.07■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms