RNA–Protein interactions for RNA: ENST00000419249.2

AGRN-202, Transcript of agrin, humanhuman

TSL 3

Gene AGRN, Length 861 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGRN-202ENST00000419249 CCDC87Q9NVE4 849 aa24.04■■□□□ 1.44
AGRN-202ENST00000419249 TRAPPC3LQ5T215 181 aa24.03■■□□□ 1.44
AGRN-202ENST00000419249 DIEXFQ68CQ4 756 aaKnown RBP24.03■■□□□ 1.44
AGRN-202ENST00000419249 MIS18AQ9NYP9 233 aa24.03■■□□□ 1.44
AGRN-202ENST00000419249 KDM3BQ7LBC6 1761 aa24.02■■□□□ 1.44
AGRN-202ENST00000419249 CCDC27Q2M243 656 aa24.02■■□□□ 1.44
AGRN-202ENST00000419249 SMIM5Q71RC9 77 aa24.02■■□□□ 1.44
AGRN-202ENST00000419249 POLD1P28340 1107 aa24.01■■□□□ 1.43
AGRN-202ENST00000419249 EIF4A1P60842 406 aaKnown RBP24.01■■□□□ 1.43
AGRN-202ENST00000419249 CHL1O00533 1208 aa24■■□□□ 1.43
AGRN-202ENST00000419249 CALD1Q05682 793 aaKnown RBP24■■□□□ 1.43
AGRN-202ENST00000419249 ARXQ96QS3 562 aa24■■□□□ 1.43
AGRN-202ENST00000419249 TSPYL4Q9UJ04 414 aa24■■□□□ 1.43
AGRN-202ENST00000419249 ARHGEF1Q92888 912 aaKnown RBP23.99■■□□□ 1.43
AGRN-202ENST00000419249 SOS1Q07889 1333 aaPredicted RBP23.99■■□□□ 1.43
AGRN-202ENST00000419249 FAM9BQ8IZU0 186 aa23.98■■□□□ 1.43
AGRN-202ENST00000419249 CFAP44Q96MT7 982 aa23.98■■□□□ 1.43
AGRN-202ENST00000419249 ZBTB1Q9Y2K1 713 aa23.98■■□□□ 1.43
AGRN-202ENST00000419249 GIGYF1O75420 1035 aaPredicted RBP23.97■■□□□ 1.43
AGRN-202ENST00000419249 C4AP0C0L4 1744 aa23.97■■□□□ 1.43
AGRN-202ENST00000419249 MSL1Q68DK7 614 aa23.97■■□□□ 1.43
AGRN-202ENST00000419249 NGEFQ8N5V2 710 aa23.97■■□□□ 1.43
AGRN-202ENST00000419249 USP16Q9Y5T5 823 aa23.97■■□□□ 1.43
AGRN-202ENST00000419249 ZNF853P0CG23 659 aa23.96■■□□□ 1.43
AGRN-202ENST00000419249 RFC4P35249 363 aa23.96■■□□□ 1.43
AGRN-202ENST00000419249 EIF5P55010 431 aaKnown RBP23.95■■□□□ 1.42
AGRN-202ENST00000419249 FHDC1Q9C0D6 1143 aaPredicted RBP23.95■■□□□ 1.42
AGRN-202ENST00000419249 IFT57Q9NWB7 429 aa23.95■■□□□ 1.42
AGRN-202ENST00000419249 PRAMEF22A3QJZ6 481 aa23.94■■□□□ 1.42
AGRN-202ENST00000419249 IL6STP40189 918 aaPredicted RBP23.94■■□□□ 1.42
AGRN-202ENST00000419249 A1BGP04217 495 aa23.93■■□□□ 1.42
AGRN-202ENST00000419249 GNAI1P63096 354 aa23.93■■□□□ 1.42
AGRN-202ENST00000419249 WWC1Q8IX03 1113 aa23.93■■□□□ 1.42
AGRN-202ENST00000419249 NLGN1Q8N2Q7 840 aa23.93■■□□□ 1.42
AGRN-202ENST00000419249 A0A087WZG4 1122 aa23.92■■□□□ 1.42
AGRN-202ENST00000419249 CANXP27824 592 aaKnown RBP23.92■■□□□ 1.42
AGRN-202ENST00000419249 COL15A1P39059 1388 aa23.91■■□□□ 1.42
AGRN-202ENST00000419249 USP42Q9H9J4 1324 aaKnown RBP23.91■■□□□ 1.42
AGRN-202ENST00000419249 SYT17Q9BSW7 474 aa23.91■■□□□ 1.42
AGRN-202ENST00000419249 GYS1P13807 737 aa23.9■■□□□ 1.42
AGRN-202ENST00000419249 NARFQ9UHQ1 456 aa23.9■■□□□ 1.42
AGRN-202ENST00000419249 LAS1LQ9Y4W2 734 aaKnown RBP23.9■■□□□ 1.42
AGRN-202ENST00000419249 IL16Q14005 1332 aa23.89■■□□□ 1.42
AGRN-202ENST00000419249 ERBB4Q15303 1308 aa23.88■■□□□ 1.41
AGRN-202ENST00000419249 ZPR1O75312 459 aa23.88■■□□□ 1.41
AGRN-202ENST00000419249 HOXB7P09629 217 aa23.88■■□□□ 1.41
AGRN-202ENST00000419249 MBIPQ9NS73 344 aa23.88■■□□□ 1.41
AGRN-202ENST00000419249 LAMB4A4D0S4 1761 aa23.88■■□□□ 1.41
AGRN-202ENST00000419249 NPM2Q86SE8 214 aaKnown RBP23.87■■□□□ 1.41
AGRN-202ENST00000419249 WDR63Q8IWG1 891 aa23.87■■□□□ 1.41
AGRN-202ENST00000419249 MIER1Q8N108 512 aa23.87■■□□□ 1.41
AGRN-202ENST00000419249 NBPF26B4DH59 902 aa23.86■■□□□ 1.41
AGRN-202ENST00000419249 NBPF10Q6P3W6 841 aaKnown RBP23.86■■□□□ 1.41
AGRN-202ENST00000419249 NBPF15Q8N660 670 aa23.86■■□□□ 1.41
AGRN-202ENST00000419249 SRP68Q9UHB9 627 aaKnown RBP23.86■■□□□ 1.41
AGRN-202ENST00000419249 KLHL34Q8N239 644 aa23.85■■□□□ 1.41
AGRN-202ENST00000419249 RGL2O15211 777 aa23.84■■□□□ 1.41
AGRN-202ENST00000419249 USPL1Q5W0Q7 1092 aa23.84■■□□□ 1.41
AGRN-202ENST00000419249 MMP10P09238 476 aa23.83■■□□□ 1.41
AGRN-202ENST00000419249 FKBP8Q14318 412 aa23.83■■□□□ 1.41
AGRN-202ENST00000419249 BCL2L12Q9HB09 334 aa23.82■■□□□ 1.4
AGRN-202ENST00000419249 TM4SF1P30408 202 aa23.81■■□□□ 1.4
AGRN-202ENST00000419249 CD2APQ9Y5K6 639 aa23.81■■□□□ 1.4
AGRN-202ENST00000419249 SENP3-EIF4A1A0A087X0R7 540 aa23.8■■□□□ 1.4
AGRN-202ENST00000419249 PIP4K2AP48426 406 aaPredicted RBP23.8■■□□□ 1.4
AGRN-202ENST00000419249 KRT24Q2M2I5 525 aa23.8■■□□□ 1.4
AGRN-202ENST00000419249 DUSP27Q5VZP5 1158 aa23.8■■□□□ 1.4
AGRN-202ENST00000419249 DZIP3Q86Y13 1208 aaKnown RBP23.8■■□□□ 1.4
AGRN-202ENST00000419249 TBC1D2BQ9UPU7 963 aa23.8■■□□□ 1.4
AGRN-202ENST00000419249 ZNF330Q9Y3S2 320 aaPredicted RBP23.8■■□□□ 1.4
AGRN-202ENST00000419249 CAMTA2O94983 1202 aa23.79■■□□□ 1.4
AGRN-202ENST00000419249 EIF2S2P20042 333 aaKnown RBP23.79■■□□□ 1.4
AGRN-202ENST00000419249 CHMP4AQ9BY43 222 aa23.79■■□□□ 1.4
AGRN-202ENST00000419249 SALL2Q9Y467 1007 aaPredicted RBP23.79■■□□□ 1.4
AGRN-202ENST00000419249 ZNF521Q96K83 1311 aa23.79■■□□□ 1.4
AGRN-202ENST00000419249 DCAF8L1A6NGE4 600 aa23.78■■□□□ 1.4
AGRN-202ENST00000419249 PDIA6Q15084 440 aa23.78■■□□□ 1.4
AGRN-202ENST00000419249 CLEC4GQ6UXB4 293 aa23.78■■□□□ 1.4
AGRN-202ENST00000419249 NLGN2Q8NFZ4 835 aa23.78■■□□□ 1.4
AGRN-202ENST00000419249 PARP3Q9Y6F1 533 aa23.78■■□□□ 1.4
AGRN-202ENST00000419249 SCN7AQ01118 1682 aa23.78■■□□□ 1.4
AGRN-202ENST00000419249 KIF13BQ9NQT8 1826 aa23.77■■□□□ 1.4
AGRN-202ENST00000419249 LRP10Q7Z4F1 713 aa23.77■■□□□ 1.4
AGRN-202ENST00000419249 NFIXQ14938 502 aa23.76■■□□□ 1.39
AGRN-202ENST00000419249 DDX21Q9NR30 783 aaKnown RBP eCLIP23.76■■□□□ 1.39
AGRN-202ENST00000419249 ERVV-1B6SEH8 477 aa23.75■■□□□ 1.39
AGRN-202ENST00000419249 DDR1Q08345 913 aa23.75■■□□□ 1.39
AGRN-202ENST00000419249 HDGFL1Q5TGJ6 251 aa23.75■■□□□ 1.39
AGRN-202ENST00000419249 BCORQ6W2J9 1755 aa23.74■■□□□ 1.39
AGRN-202ENST00000419249 POLRMTO00411 1230 aaKnown RBP23.74■■□□□ 1.39
AGRN-202ENST00000419249 C8orf58Q8NAV2 365 aa23.74■■□□□ 1.39
AGRN-202ENST00000419249 TSR2Q969E8 191 aaKnown RBP23.74■■□□□ 1.39
AGRN-202ENST00000419249 ZNF652Q9Y2D9 606 aa23.74■■□□□ 1.39
AGRN-202ENST00000419249 C10orf71Q711Q0 1435 aa23.74■■□□□ 1.39
AGRN-202ENST00000419249 MYL6BP14649 208 aa23.73■■□□□ 1.39
AGRN-202ENST00000419249 DBF4Q9UBU7 674 aaPredicted RBP23.73■■□□□ 1.39
AGRN-202ENST00000419249 FANCIQ9NVI1 1328 aa23.72■■□□□ 1.39
AGRN-202ENST00000419249 MAP3K15Q6ZN16 1313 aa23.71■■□□□ 1.39
AGRN-202ENST00000419249 GOLGA2Q08379 1002 aa23.71■■□□□ 1.39
AGRN-202ENST00000419249 PROSER3Q2NL68 480 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms