RNA–Protein interactions for RNA: ENST00000418576.3

SEMA3B-202, Transcript of semaphorin 3B, humanhuman

TSL 2 BASIC

Gene SEMA3B, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-202ENST00000418576 NUP188Q5SRE5 1749 aa23.9■■□□□ 1.42
SEMA3B-202ENST00000418576 ELL2O00472 640 aaPredicted RBP23.9■■□□□ 1.42
SEMA3B-202ENST00000418576 C8orf58Q8NAV2 365 aa23.9■■□□□ 1.42
SEMA3B-202ENST00000418576 TJP1Q07157 1748 aa23.9■■□□□ 1.42
SEMA3B-202ENST00000418576 AKT1S1Q96B36 256 aa23.89■■□□□ 1.42
SEMA3B-202ENST00000418576 CCDC87Q9NVE4 849 aa23.89■■□□□ 1.42
SEMA3B-202ENST00000418576 TAF1LQ8IZX4 1826 aa23.89■■□□□ 1.41
SEMA3B-202ENST00000418576 EIF2S2P20042 333 aaKnown RBP23.88■■□□□ 1.41
SEMA3B-202ENST00000418576 EXOSC9Q06265 439 aaKnown RBP23.88■■□□□ 1.41
SEMA3B-202ENST00000418576 SLC15A2Q16348 729 aa23.88■■□□□ 1.41
SEMA3B-202ENST00000418576 TRMT2AQ8IZ69 625 aaKnown RBP23.88■■□□□ 1.41
SEMA3B-202ENST00000418576 TFCP2L1Q9NZI6 479 aa23.88■■□□□ 1.41
SEMA3B-202ENST00000418576 C4BP0C0L5 1744 aa23.88■■□□□ 1.41
SEMA3B-202ENST00000418576 TWISTNBQ3B726 338 aaPredicted RBP23.88■■□□□ 1.41
SEMA3B-202ENST00000418576 COL5A3P25940 1745 aaPredicted RBP23.87■■□□□ 1.41
SEMA3B-202ENST00000418576 GNPATO15228 680 aa23.87■■□□□ 1.41
SEMA3B-202ENST00000418576 CENPBP07199 599 aaPredicted RBP23.87■■□□□ 1.41
SEMA3B-202ENST00000418576 ANO8Q9HCE9 1232 aaPredicted RBP23.87■■□□□ 1.41
SEMA3B-202ENST00000418576 ZNF827Q17R98 1081 aa23.86■■□□□ 1.41
SEMA3B-202ENST00000418576 HDGFL1Q5TGJ6 251 aa23.86■■□□□ 1.41
SEMA3B-202ENST00000418576 INTS5Q6P9B9 1019 aaKnown RBP23.86■■□□□ 1.41
SEMA3B-202ENST00000418576 RTCBQ9Y3I0 505 aaKnown RBP23.86■■□□□ 1.41
SEMA3B-202ENST00000418576 TSPYL6Q8N831 410 aa23.86■■□□□ 1.41
SEMA3B-202ENST00000418576 A1BGP04217 495 aa23.85■■□□□ 1.41
SEMA3B-202ENST00000418576 NPM2Q86SE8 214 aaKnown RBP23.85■■□□□ 1.41
SEMA3B-202ENST00000418576 ZBTB1Q9Y2K1 713 aa23.85■■□□□ 1.41
SEMA3B-202ENST00000418576 RPS6KA4O75676 772 aa23.84■■□□□ 1.41
SEMA3B-202ENST00000418576 CANXP27824 592 aaKnown RBP23.84■■□□□ 1.41
SEMA3B-202ENST00000418576 ERBB4Q15303 1308 aa23.84■■□□□ 1.41
SEMA3B-202ENST00000418576 FLAD1Q8NFF5 587 aa23.83■■□□□ 1.41
SEMA3B-202ENST00000418576 LAMB4A4D0S4 1761 aa23.83■■□□□ 1.4
SEMA3B-202ENST00000418576 SSFA2P28290 1259 aa23.83■■□□□ 1.4
SEMA3B-202ENST00000418576 CCDC30Q5VVM6 783 aa23.83■■□□□ 1.4
SEMA3B-202ENST00000418576 NECTIN2Q92692 538 aa23.83■■□□□ 1.4
SEMA3B-202ENST00000418576 VAMP4O75379 141 aa23.82■■□□□ 1.4
SEMA3B-202ENST00000418576 IL6STP40189 918 aaPredicted RBP23.82■■□□□ 1.4
SEMA3B-202ENST00000418576 TRAPPC3LQ5T215 181 aa23.81■■□□□ 1.4
SEMA3B-202ENST00000418576 PHF14O94880 888 aa23.8■■□□□ 1.4
SEMA3B-202ENST00000418576 ADRA2BP18089 450 aa23.8■■□□□ 1.4
SEMA3B-202ENST00000418576 DBF4Q9UBU7 674 aaPredicted RBP23.8■■□□□ 1.4
SEMA3B-202ENST00000418576 ZNF330Q9Y3S2 320 aaPredicted RBP23.8■■□□□ 1.4
SEMA3B-202ENST00000418576 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.8■■□□□ 1.4
SEMA3B-202ENST00000418576 MYH14Q7Z406 1995 aaKnown RBP23.79■■□□□ 1.4
SEMA3B-202ENST00000418576 CT47B1P0C2W7 299 aaPredicted RBP23.79■■□□□ 1.4
SEMA3B-202ENST00000418576 PIP4K2AP48426 406 aaPredicted RBP23.79■■□□□ 1.4
SEMA3B-202ENST00000418576 R3HDM1Q15032 1099 aaKnown RBP23.79■■□□□ 1.4
SEMA3B-202ENST00000418576 NBPF26B4DH59 902 aa23.78■■□□□ 1.4
SEMA3B-202ENST00000418576 MYL6BP14649 208 aa23.78■■□□□ 1.4
SEMA3B-202ENST00000418576 EIF5P55010 431 aaKnown RBP23.78■■□□□ 1.4
SEMA3B-202ENST00000418576 NBPF10Q6P3W6 841 aaKnown RBP23.78■■□□□ 1.4
SEMA3B-202ENST00000418576 NBPF15Q8N660 670 aa23.78■■□□□ 1.4
SEMA3B-202ENST00000418576 STK31Q9BXU1 1019 aa23.78■■□□□ 1.4
SEMA3B-202ENST00000418576 DDX21Q9NR30 783 aaKnown RBP eCLIP23.78■■□□□ 1.4
SEMA3B-202ENST00000418576 A0A087WZG4 1122 aa23.78■■□□□ 1.4
SEMA3B-202ENST00000418576 ZNF428Q96B54 188 aa23.78■■□□□ 1.4
SEMA3B-202ENST00000418576 CHPF2Q9P2E5 772 aa23.78■■□□□ 1.4
SEMA3B-202ENST00000418576 PNPLA7Q6ZV29 1317 aa23.77■■□□□ 1.4
SEMA3B-202ENST00000418576 MSH5O43196 834 aa23.77■■□□□ 1.4
SEMA3B-202ENST00000418576 RFC4P35249 363 aa23.76■■□□□ 1.39
SEMA3B-202ENST00000418576 PDIA6Q15084 440 aa23.76■■□□□ 1.39
SEMA3B-202ENST00000418576 AMIGO3Q86WK7 504 aa23.76■■□□□ 1.39
SEMA3B-202ENST00000418576 COL15A1P39059 1388 aa23.76■■□□□ 1.39
SEMA3B-202ENST00000418576 ARHGEF1Q92888 912 aaKnown RBP23.75■■□□□ 1.39
SEMA3B-202ENST00000418576 ARXQ96QS3 562 aa23.75■■□□□ 1.39
SEMA3B-202ENST00000418576 HYPKQ9NX55 129 aa23.75■■□□□ 1.39
SEMA3B-202ENST00000418576 UBR3Q6ZT12 1888 aa23.75■■□□□ 1.39
SEMA3B-202ENST00000418576 SMIM5Q71RC9 77 aa23.75■■□□□ 1.39
SEMA3B-202ENST00000418576 COL23A1Q86Y22 540 aaPredicted RBP23.75■■□□□ 1.39
SEMA3B-202ENST00000418576 PSDA5PKW4 1024 aaPredicted RBP23.74■■□□□ 1.39
SEMA3B-202ENST00000418576 PELP1Q8IZL8 1130 aaKnown RBP23.74■■□□□ 1.39
SEMA3B-202ENST00000418576 PROSER3Q2NL68 480 aa23.73■■□□□ 1.39
SEMA3B-202ENST00000418576 ZPR1O75312 459 aa23.73■■□□□ 1.39
SEMA3B-202ENST00000418576 ANXA1P04083 346 aa23.73■■□□□ 1.39
SEMA3B-202ENST00000418576 TCERG1O14776 1098 aaKnown RBP23.72■■□□□ 1.39
SEMA3B-202ENST00000418576 SLC4A2P04920 1241 aa23.72■■□□□ 1.39
SEMA3B-202ENST00000418576 DZIP3Q86Y13 1208 aaKnown RBP23.72■■□□□ 1.39
SEMA3B-202ENST00000418576 QSER1Q2KHR3 1735 aa23.72■■□□□ 1.39
SEMA3B-202ENST00000418576 KIF6Q6ZMV9 814 aa23.7■■□□□ 1.39
SEMA3B-202ENST00000418576 LRP10Q7Z4F1 713 aa23.7■■□□□ 1.39
SEMA3B-202ENST00000418576 SLC16A10Q8TF71 515 aa23.7■■□□□ 1.39
SEMA3B-202ENST00000418576 NARFQ9UHQ1 456 aa23.7■■□□□ 1.39
SEMA3B-202ENST00000418576 TBC1D2BQ9UPU7 963 aa23.7■■□□□ 1.39
SEMA3B-202ENST00000418576 TUBGCP6Q96RT7 1819 aa23.69■■□□□ 1.38
SEMA3B-202ENST00000418576 AIMP1Q12904 312 aaKnown RBP23.69■■□□□ 1.38
SEMA3B-202ENST00000418576 ALDH1L2Q3SY69 923 aa23.69■■□□□ 1.38
SEMA3B-202ENST00000418576 COPS6Q7L5N1 327 aa23.69■■□□□ 1.38
SEMA3B-202ENST00000418576 USP42Q9H9J4 1324 aaKnown RBP23.69■■□□□ 1.38
SEMA3B-202ENST00000418576 XAGE3Q8WTP9 111 aa23.68■■□□□ 1.38
SEMA3B-202ENST00000418576 PDGFDQ9GZP0 370 aaPredicted RBP23.68■■□□□ 1.38
SEMA3B-202ENST00000418576 USPL1Q5W0Q7 1092 aa23.67■■□□□ 1.38
SEMA3B-202ENST00000418576 SSH1Q8WYL5 1049 aa23.67■■□□□ 1.38
SEMA3B-202ENST00000418576 PHAXQ9H814 394 aaKnown RBP23.66■■□□□ 1.38
SEMA3B-202ENST00000418576 SMC4Q9NTJ3 1288 aa23.66■■□□□ 1.38
SEMA3B-202ENST00000418576 SRP68Q9UHB9 627 aaKnown RBP23.66■■□□□ 1.38
SEMA3B-202ENST00000418576 DDX58O95786 925 aaKnown RBP23.65■■□□□ 1.38
SEMA3B-202ENST00000418576 TTLL7Q6ZT98 887 aa23.65■■□□□ 1.38
SEMA3B-202ENST00000418576 ZNF652Q9Y2D9 606 aa23.65■■□□□ 1.38
SEMA3B-202ENST00000418576 ERVV-1B6SEH8 477 aa23.65■■□□□ 1.38
SEMA3B-202ENST00000418576 RARSP54136 660 aaKnown RBP23.65■■□□□ 1.38
SEMA3B-202ENST00000418576 MAP3K15Q6ZN16 1313 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms