RNA–Protein interactions for RNA: ENST00000417382.5

HMG20B-204, Transcript of high mobility group 20B, humanhuman

TSL 4

Gene HMG20B, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-204ENST00000417382 CCDC146Q8IYE0 955 aa27.78■■■□□ 2.04
HMG20B-204ENST00000417382 ZBTB1Q9Y2K1 713 aa27.78■■■□□ 2.04
HMG20B-204ENST00000417382 SNRPA1P09661 255 aaKnown RBP27.77■■■□□ 2.04
HMG20B-204ENST00000417382 GYS1P13807 737 aa27.77■■■□□ 2.04
HMG20B-204ENST00000417382 BABAM1Q9NWV8 329 aa27.77■■■□□ 2.04
HMG20B-204ENST00000417382 USP42Q9H9J4 1324 aaKnown RBP27.76■■■□□ 2.03
HMG20B-204ENST00000417382 THUMPD2Q9BTF0 503 aaKnown RBP27.75■■■□□ 2.03
HMG20B-204ENST00000417382 CD2APQ9Y5K6 639 aa27.74■■■□□ 2.03
HMG20B-204ENST00000417382 C4AP0C0L4 1744 aa27.74■■■□□ 2.03
HMG20B-204ENST00000417382 COL15A1P39059 1388 aa27.73■■■□□ 2.03
HMG20B-204ENST00000417382 EIF5P55010 431 aaKnown RBP27.73■■■□□ 2.03
HMG20B-204ENST00000417382 A0A087WZG4 1122 aa27.72■■■□□ 2.03
HMG20B-204ENST00000417382 NARFQ9UHQ1 456 aa27.72■■■□□ 2.03
HMG20B-204ENST00000417382 DCAF8L1A6NGE4 600 aa27.71■■■□□ 2.03
HMG20B-204ENST00000417382 ZPR1O75312 459 aa27.71■■■□□ 2.03
HMG20B-204ENST00000417382 MMP10P09238 476 aa27.71■■■□□ 2.03
HMG20B-204ENST00000417382 IL6STP40189 918 aaPredicted RBP27.71■■■□□ 2.03
HMG20B-204ENST00000417382 MIS18AQ9NYP9 233 aa27.71■■■□□ 2.03
HMG20B-204ENST00000417382 KDM3BQ7LBC6 1761 aa27.71■■■□□ 2.03
HMG20B-204ENST00000417382 CANXP27824 592 aaKnown RBP27.7■■■□□ 2.02
HMG20B-204ENST00000417382 CCDC184Q52MB2 194 aa27.7■■■□□ 2.02
HMG20B-204ENST00000417382 TRIM35Q9UPQ4 493 aa27.7■■■□□ 2.02
HMG20B-204ENST00000417382 RRP7AQ9Y3A4 280 aaKnown RBP27.7■■■□□ 2.02
HMG20B-204ENST00000417382 USP16Q9Y5T5 823 aa27.7■■■□□ 2.02
HMG20B-204ENST00000417382 EIF4A1P60842 406 aaKnown RBP27.69■■■□□ 2.02
HMG20B-204ENST00000417382 SRP68Q9UHB9 627 aaKnown RBP27.69■■■□□ 2.02
HMG20B-204ENST00000417382 NEUROD2Q15784 382 aa27.67■■■□□ 2.02
HMG20B-204ENST00000417382 MRS2Q9HD23 443 aa27.67■■■□□ 2.02
HMG20B-204ENST00000417382 TSPYL4Q9UJ04 414 aa27.67■■■□□ 2.02
HMG20B-204ENST00000417382 GIGYF1O75420 1035 aaPredicted RBP27.66■■■□□ 2.02
HMG20B-204ENST00000417382 A1BGP04217 495 aa27.66■■■□□ 2.02
HMG20B-204ENST00000417382 USPL1Q5W0Q7 1092 aa27.66■■■□□ 2.02
HMG20B-204ENST00000417382 KLHL34Q8N239 644 aa27.66■■■□□ 2.02
HMG20B-204ENST00000417382 PRAMEF22A3QJZ6 481 aa27.65■■■□□ 2.02
HMG20B-204ENST00000417382 FKBP8Q14318 412 aa27.65■■■□□ 2.02
HMG20B-204ENST00000417382 APAF1O14727 1248 aa27.64■■■□□ 2.02
HMG20B-204ENST00000417382 PARP3Q9Y6F1 533 aa27.64■■■□□ 2.02
HMG20B-204ENST00000417382 CHL1O00533 1208 aa27.63■■■□□ 2.01
HMG20B-204ENST00000417382 TM4SF1P30408 202 aa27.63■■■□□ 2.01
HMG20B-204ENST00000417382 NPM2Q86SE8 214 aaKnown RBP27.63■■■□□ 2.01
HMG20B-204ENST00000417382 NLGN2Q8NFZ4 835 aa27.63■■■□□ 2.01
HMG20B-204ENST00000417382 NCBP3Q53F19 620 aaKnown RBP27.61■■■□□ 2.01
HMG20B-204ENST00000417382 BCL2L12Q9HB09 334 aa27.61■■■□□ 2.01
HMG20B-204ENST00000417382 RGL2O15211 777 aa27.6■■■□□ 2.01
HMG20B-204ENST00000417382 CALD1Q05682 793 aaKnown RBP27.6■■■□□ 2.01
HMG20B-204ENST00000417382 LAMB4A4D0S4 1761 aa27.6■■■□□ 2.01
HMG20B-204ENST00000417382 C10orf71Q711Q0 1435 aa27.59■■■□□ 2.01
HMG20B-204ENST00000417382 NBPF26B4DH59 902 aa27.58■■■□□ 2.01
HMG20B-204ENST00000417382 DDR1Q08345 913 aa27.58■■■□□ 2.01
HMG20B-204ENST00000417382 NBPF10Q6P3W6 841 aaKnown RBP27.58■■■□□ 2.01
HMG20B-204ENST00000417382 NBPF15Q8N660 670 aa27.58■■■□□ 2.01
HMG20B-204ENST00000417382 CFAP44Q96MT7 982 aa27.58■■■□□ 2.01
HMG20B-204ENST00000417382 ERBB4Q15303 1308 aa27.58■■■□□ 2.01
HMG20B-204ENST00000417382 POLRMTO00411 1230 aaKnown RBP27.57■■■□□ 2
HMG20B-204ENST00000417382 TGFB2P61812 414 aa27.57■■■□□ 2
HMG20B-204ENST00000417382 KIF13BQ9NQT8 1826 aa27.56■■■□□ 2
HMG20B-204ENST00000417382 NFIXQ14938 502 aa27.56■■■□□ 2
HMG20B-204ENST00000417382 CCDC27Q2M243 656 aa27.56■■■□□ 2
HMG20B-204ENST00000417382 TBC1D2BQ9UPU7 963 aa27.56■■■□□ 2
HMG20B-204ENST00000417382 ZNF330Q9Y3S2 320 aaPredicted RBP27.56■■■□□ 2
HMG20B-204ENST00000417382 CAMTA2O94983 1202 aa27.55■■■□□ 2
HMG20B-204ENST00000417382 DZIP3Q86Y13 1208 aaKnown RBP27.55■■■□□ 2
HMG20B-204ENST00000417382 SCN7AQ01118 1682 aa27.55■■■□□ 2
HMG20B-204ENST00000417382 ZNF853P0CG23 659 aa27.54■■■□□ 2
HMG20B-204ENST00000417382 CLEC4GQ6UXB4 293 aa27.54■■■□□ 2
HMG20B-204ENST00000417382 GPR162Q16538 588 aa27.53■■■□□ 2
HMG20B-204ENST00000417382 IFT57Q9NWB7 429 aa27.53■■■□□ 2
HMG20B-204ENST00000417382 HOXB7P09629 217 aa27.52■■■□□ 2
HMG20B-204ENST00000417382 PIP4K2AP48426 406 aaPredicted RBP27.52■■■□□ 2
HMG20B-204ENST00000417382 LAS1LQ9Y4W2 734 aaKnown RBP27.51■■□□□ 1.99
HMG20B-204ENST00000417382 GNAI1P63096 354 aa27.5■■□□□ 1.99
HMG20B-204ENST00000417382 ZNF652Q9Y2D9 606 aa27.5■■□□□ 1.99
HMG20B-204ENST00000417382 UTRNP46939 3433 aa27.5■■□□□ 1.99
HMG20B-204ENST00000417382 GRIN3BO60391 1043 aa27.49■■□□□ 1.99
HMG20B-204ENST00000417382 TBC1D9BQ66K14 1250 aa27.49■■□□□ 1.99
HMG20B-204ENST00000417382 NRXN2Q9P2S2 1712 aa27.49■■□□□ 1.99
HMG20B-204ENST00000417382 PXDNLA1KZ92 1463 aa27.49■■□□□ 1.99
HMG20B-204ENST00000417382 BCORQ6W2J9 1755 aa27.48■■□□□ 1.99
HMG20B-204ENST00000417382 SERPINB2P05120 415 aa27.48■■□□□ 1.99
HMG20B-204ENST00000417382 CARMIL3Q8ND23 1372 aa27.48■■□□□ 1.99
HMG20B-204ENST00000417382 ERVV-1B6SEH8 477 aa27.47■■□□□ 1.99
HMG20B-204ENST00000417382 MBIPQ9NS73 344 aa27.47■■□□□ 1.99
HMG20B-204ENST00000417382 NGEFQ8N5V2 710 aa27.46■■□□□ 1.99
HMG20B-204ENST00000417382 SETDB2Q96T68 719 aa27.46■■□□□ 1.99
HMG20B-204ENST00000417382 GOLGB1Q14789 3259 aaKnown RBP27.46■■□□□ 1.99
HMG20B-204ENST00000417382 YBX3P16989 372 aaKnown RBP eCLIP27.45■■□□□ 1.98
HMG20B-204ENST00000417382 WWC1Q8IX03 1113 aa27.45■■□□□ 1.98
HMG20B-204ENST00000417382 KIAA1551Q9HCM1 1747 aa27.44■■□□□ 1.98
HMG20B-204ENST00000417382 PDIA6Q15084 440 aa27.44■■□□□ 1.98
HMG20B-204ENST00000417382 LRP10Q7Z4F1 713 aa27.44■■□□□ 1.98
HMG20B-204ENST00000417382 PELP1Q8IZL8 1130 aaKnown RBP27.44■■□□□ 1.98
HMG20B-204ENST00000417382 EIF2S2P20042 333 aaKnown RBP27.43■■□□□ 1.98
HMG20B-204ENST00000417382 BICDL1Q6ZP65 573 aa27.43■■□□□ 1.98
HMG20B-204ENST00000417382 IL16Q14005 1332 aa27.42■■□□□ 1.98
HMG20B-204ENST00000417382 MAP3K15Q6ZN16 1313 aa27.42■■□□□ 1.98
HMG20B-204ENST00000417382 AFDNP55196 1824 aaKnown RBP27.42■■□□□ 1.98
HMG20B-204ENST00000417382 MYL6BP14649 208 aa27.42■■□□□ 1.98
HMG20B-204ENST00000417382 DPEP1P16444 411 aa27.42■■□□□ 1.98
HMG20B-204ENST00000417382 KIF6Q6ZMV9 814 aa27.42■■□□□ 1.98
HMG20B-204ENST00000417382 A0A0G2JLW4 131 aa27.41■■□□□ 1.98
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms