RNA–Protein interactions for RNA: ENST00000417157.2

SLC13A3-205, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 876 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-205ENST00000417157 USP42Q9H9J4 1324 aaKnown RBP18.68■□□□□ 0.58
SLC13A3-205ENST00000417157 COL15A1P39059 1388 aa18.68■□□□□ 0.58
SLC13A3-205ENST00000417157 ZPR1O75312 459 aa18.67■□□□□ 0.58
SLC13A3-205ENST00000417157 SNRPA1P09661 255 aaKnown RBP18.67■□□□□ 0.58
SLC13A3-205ENST00000417157 TMPOP42166 694 aaKnown RBP18.67■□□□□ 0.58
SLC13A3-205ENST00000417157 CCDC146Q8IYE0 955 aa18.67■□□□□ 0.58
SLC13A3-205ENST00000417157 DLG5Q8TDM6 1919 aa18.66■□□□□ 0.58
SLC13A3-205ENST00000417157 MYH14Q7Z406 1995 aaKnown RBP18.66■□□□□ 0.58
SLC13A3-205ENST00000417157 C4AP0C0L4 1744 aa18.66■□□□□ 0.58
SLC13A3-205ENST00000417157 A0A087WZG4 1122 aa18.66■□□□□ 0.58
SLC13A3-205ENST00000417157 GYS1P13807 737 aa18.66■□□□□ 0.58
SLC13A3-205ENST00000417157 CD2APQ9Y5K6 639 aa18.66■□□□□ 0.58
SLC13A3-205ENST00000417157 KCNQ3O43525 872 aa18.65■□□□□ 0.58
SLC13A3-205ENST00000417157 MMP10P09238 476 aa18.65■□□□□ 0.58
SLC13A3-205ENST00000417157 CANXP27824 592 aaKnown RBP18.65■□□□□ 0.58
SLC13A3-205ENST00000417157 BABAM1Q9NWV8 329 aa18.64■□□□□ 0.57
SLC13A3-205ENST00000417157 IL6STP40189 918 aaPredicted RBP18.63■□□□□ 0.57
SLC13A3-205ENST00000417157 THUMPD2Q9BTF0 503 aaKnown RBP18.63■□□□□ 0.57
SLC13A3-205ENST00000417157 NARFQ9UHQ1 456 aa18.63■□□□□ 0.57
SLC13A3-205ENST00000417157 PARP3Q9Y6F1 533 aa18.63■□□□□ 0.57
SLC13A3-205ENST00000417157 NEUROD2Q15784 382 aa18.62■□□□□ 0.57
SLC13A3-205ENST00000417157 SRP68Q9UHB9 627 aaKnown RBP18.62■□□□□ 0.57
SLC13A3-205ENST00000417157 RRP7AQ9Y3A4 280 aaKnown RBP18.62■□□□□ 0.57
SLC13A3-205ENST00000417157 KDM3BQ7LBC6 1761 aa18.61■□□□□ 0.57
SLC13A3-205ENST00000417157 EIF5P55010 431 aaKnown RBP18.61■□□□□ 0.57
SLC13A3-205ENST00000417157 USPL1Q5W0Q7 1092 aa18.61■□□□□ 0.57
SLC13A3-205ENST00000417157 MRS2Q9HD23 443 aa18.61■□□□□ 0.57
SLC13A3-205ENST00000417157 MIS18AQ9NYP9 233 aa18.61■□□□□ 0.57
SLC13A3-205ENST00000417157 TSPYL4Q9UJ04 414 aa18.61■□□□□ 0.57
SLC13A3-205ENST00000417157 ZNF330Q9Y3S2 320 aaPredicted RBP18.6■□□□□ 0.57
SLC13A3-205ENST00000417157 EIF4A1P60842 406 aaKnown RBP18.59■□□□□ 0.57
SLC13A3-205ENST00000417157 FKBP8Q14318 412 aa18.59■□□□□ 0.57
SLC13A3-205ENST00000417157 NLGN2Q8NFZ4 835 aa18.59■□□□□ 0.57
SLC13A3-205ENST00000417157 USP16Q9Y5T5 823 aa18.59■□□□□ 0.57
SLC13A3-205ENST00000417157 CALD1Q05682 793 aaKnown RBP18.58■□□□□ 0.56
SLC13A3-205ENST00000417157 LAMB4A4D0S4 1761 aa18.58■□□□□ 0.56
SLC13A3-205ENST00000417157 C10orf71Q711Q0 1435 aa18.57■□□□□ 0.56
SLC13A3-205ENST00000417157 GIGYF1O75420 1035 aaPredicted RBP18.57■□□□□ 0.56
SLC13A3-205ENST00000417157 A1BGP04217 495 aa18.57■□□□□ 0.56
SLC13A3-205ENST00000417157 GPR162Q16538 588 aa18.57■□□□□ 0.56
SLC13A3-205ENST00000417157 PRAMEF22A3QJZ6 481 aa18.56■□□□□ 0.56
SLC13A3-205ENST00000417157 TRIM35Q9UPQ4 493 aa18.56■□□□□ 0.56
SLC13A3-205ENST00000417157 SCN7AQ01118 1682 aa18.55■□□□□ 0.56
SLC13A3-205ENST00000417157 APAF1O14727 1248 aa18.55■□□□□ 0.56
SLC13A3-205ENST00000417157 TGFB2P61812 414 aa18.55■□□□□ 0.56
SLC13A3-205ENST00000417157 PELP1Q8IZL8 1130 aaKnown RBP18.55■□□□□ 0.56
SLC13A3-205ENST00000417157 ERBB4Q15303 1308 aa18.54■□□□□ 0.56
SLC13A3-205ENST00000417157 TM4SF1P30408 202 aa18.54■□□□□ 0.56
SLC13A3-205ENST00000417157 CCDC184Q52MB2 194 aa18.54■□□□□ 0.56
SLC13A3-205ENST00000417157 DZIP3Q86Y13 1208 aaKnown RBP18.54■□□□□ 0.56
SLC13A3-205ENST00000417157 ZNF652Q9Y2D9 606 aa18.54■□□□□ 0.56
SLC13A3-205ENST00000417157 POLRMTO00411 1230 aaKnown RBP18.53■□□□□ 0.56
SLC13A3-205ENST00000417157 RGL2O15211 777 aa18.53■□□□□ 0.56
SLC13A3-205ENST00000417157 GRIN3BO60391 1043 aa18.53■□□□□ 0.56
SLC13A3-205ENST00000417157 DDR1Q08345 913 aa18.53■□□□□ 0.56
SLC13A3-205ENST00000417157 NFIXQ14938 502 aa18.53■□□□□ 0.56
SLC13A3-205ENST00000417157 TBC1D2BQ9UPU7 963 aa18.53■□□□□ 0.56
SLC13A3-205ENST00000417157 CHL1O00533 1208 aa18.52■□□□□ 0.56
SLC13A3-205ENST00000417157 CFAP44Q96MT7 982 aa18.52■□□□□ 0.56
SLC13A3-205ENST00000417157 BCL2L12Q9HB09 334 aa18.52■□□□□ 0.56
SLC13A3-205ENST00000417157 LAS1LQ9Y4W2 734 aaKnown RBP18.52■□□□□ 0.56
SLC13A3-205ENST00000417157 CAMTA2O94983 1202 aa18.51■□□□□ 0.55
SLC13A3-205ENST00000417157 CLEC4GQ6UXB4 293 aa18.51■□□□□ 0.55
SLC13A3-205ENST00000417157 CARMIL3Q8ND23 1372 aa18.51■□□□□ 0.55
SLC13A3-205ENST00000417157 PXDNLA1KZ92 1463 aa18.51■□□□□ 0.55
SLC13A3-205ENST00000417157 KIF13BQ9NQT8 1826 aa18.51■□□□□ 0.55
SLC13A3-205ENST00000417157 NBPF26B4DH59 902 aa18.5■□□□□ 0.55
SLC13A3-205ENST00000417157 PIP4K2AP48426 406 aaPredicted RBP18.5■□□□□ 0.55
SLC13A3-205ENST00000417157 NBPF10Q6P3W6 841 aaKnown RBP18.5■□□□□ 0.55
SLC13A3-205ENST00000417157 NBPF15Q8N660 670 aa18.5■□□□□ 0.55
SLC13A3-205ENST00000417157 IFT57Q9NWB7 429 aa18.5■□□□□ 0.55
SLC13A3-205ENST00000417157 SERPINB2P05120 415 aa18.49■□□□□ 0.55
SLC13A3-205ENST00000417157 GNAI1P63096 354 aa18.49■□□□□ 0.55
SLC13A3-205ENST00000417157 NCBP3Q53F19 620 aaKnown RBP18.49■□□□□ 0.55
SLC13A3-205ENST00000417157 BICDL1Q6ZP65 573 aa18.49■□□□□ 0.55
SLC13A3-205ENST00000417157 BCORQ6W2J9 1755 aa18.49■□□□□ 0.55
SLC13A3-205ENST00000417157 HOXB7P09629 217 aa18.48■□□□□ 0.55
SLC13A3-205ENST00000417157 YY1P25490 414 aa18.48■□□□□ 0.55
SLC13A3-205ENST00000417157 CCDC27Q2M243 656 aa18.48■□□□□ 0.55
SLC13A3-205ENST00000417157 TBC1D9BQ66K14 1250 aa18.48■□□□□ 0.55
SLC13A3-205ENST00000417157 KIF6Q6ZMV9 814 aa18.48■□□□□ 0.55
SLC13A3-205ENST00000417157 SETDB2Q96T68 719 aa18.48■□□□□ 0.55
SLC13A3-205ENST00000417157 NPHP1O15259 732 aa18.47■□□□□ 0.55
SLC13A3-205ENST00000417157 YBX3P16989 372 aaKnown RBP eCLIP18.46■□□□□ 0.55
SLC13A3-205ENST00000417157 EIF2S2P20042 333 aaKnown RBP18.46■□□□□ 0.55
SLC13A3-205ENST00000417157 NRXN2Q9P2S2 1712 aa18.46■□□□□ 0.55
SLC13A3-205ENST00000417157 ERVV-1B6SEH8 477 aa18.45■□□□□ 0.54
SLC13A3-205ENST00000417157 MYL6BP14649 208 aa18.45■□□□□ 0.54
SLC13A3-205ENST00000417157 MBIPQ9NS73 344 aa18.45■□□□□ 0.54
SLC13A3-205ENST00000417157 A0A0G2JLW4 131 aa18.44■□□□□ 0.54
SLC13A3-205ENST00000417157 ZNF853P0CG23 659 aa18.44■□□□□ 0.54
SLC13A3-205ENST00000417157 DPEP1P16444 411 aa18.44■□□□□ 0.54
SLC13A3-205ENST00000417157 CNBD1Q8NA66 436 aa18.44■□□□□ 0.54
SLC13A3-205ENST00000417157 CHMP4AQ9BY43 222 aa18.44■□□□□ 0.54
SLC13A3-205ENST00000417157 PDZRN3Q9UPQ7 1066 aa18.44■□□□□ 0.54
SLC13A3-205ENST00000417157 KIAA1551Q9HCM1 1747 aa18.43■□□□□ 0.54
SLC13A3-205ENST00000417157 ST5P78524 1137 aa18.43■□□□□ 0.54
SLC13A3-205ENST00000417157 HDGFL1Q5TGJ6 251 aa18.43■□□□□ 0.54
SLC13A3-205ENST00000417157 NGEFQ8N5V2 710 aa18.43■□□□□ 0.54
SLC13A3-205ENST00000417157 PIM2Q9P1W9 311 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms