RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 COL15A1P39059 1388 aa29.26■■■□□ 2.27
ACTB-203ENST00000417101 POLRMTO00411 1230 aaKnown RBP29.25■■■□□ 2.27
ACTB-203ENST00000417101 ARHGAP27Q6ZUM4 889 aa29.25■■■□□ 2.27
ACTB-203ENST00000417101 PHACTR3Q96KR7 559 aa29.24■■■□□ 2.27
ACTB-203ENST00000417101 NARFQ9UHQ1 456 aa29.24■■■□□ 2.27
ACTB-203ENST00000417101 CANXP27824 592 aaKnown RBP29.23■■■□□ 2.27
ACTB-203ENST00000417101 PRKAR2BP31323 418 aa29.23■■■□□ 2.27
ACTB-203ENST00000417101 UBR2Q8IWV8 1755 aa29.22■■■□□ 2.27
ACTB-203ENST00000417101 STARD3NLO95772 234 aa29.22■■■□□ 2.27
ACTB-203ENST00000417101 ZNF790Q6PG37 636 aa29.22■■■□□ 2.27
ACTB-203ENST00000417101 ZNF496Q96IT1 587 aaPredicted RBP29.22■■■□□ 2.27
ACTB-203ENST00000417101 RSPH6AQ9H0K4 717 aa29.22■■■□□ 2.27
ACTB-203ENST00000417101 PIM2Q9P1W9 311 aa29.22■■■□□ 2.27
ACTB-203ENST00000417101 PPP2R1AP30153 589 aa29.21■■■□□ 2.27
ACTB-203ENST00000417101 NUDCQ9Y266 331 aa29.21■■■□□ 2.27
ACTB-203ENST00000417101 CEP350Q5VT06 3117 aa29.21■■■□□ 2.27
ACTB-203ENST00000417101 NFIXQ14938 502 aa29.2■■■□□ 2.26
ACTB-203ENST00000417101 CHRNA5P30532 468 aa29.19■■■□□ 2.26
ACTB-203ENST00000417101 BCL2L12Q9HB09 334 aa29.19■■■□□ 2.26
ACTB-203ENST00000417101 BRCA1P38398 1863 aaKnown RBP29.19■■■□□ 2.26
ACTB-203ENST00000417101 HEG1Q9ULI3 1381 aa29.18■■■□□ 2.26
ACTB-203ENST00000417101 U2AF1L5P0DN76 240 aaPredicted RBP29.18■■■□□ 2.26
ACTB-203ENST00000417101 U2AF1Q01081 240 aaKnown RBP eCLIP29.18■■■□□ 2.268e-43■□□□□ 8.3
ACTB-203ENST00000417101 DALRD3Q5D0E6 543 aaKnown RBP29.18■■■□□ 2.26
ACTB-203ENST00000417101 CEMIPQ8WUJ3 1361 aa29.17■■■□□ 2.26
ACTB-203ENST00000417101 EIF5P55010 431 aaKnown RBP29.16■■■□□ 2.26
ACTB-203ENST00000417101 TEX13AQ9BXU3 409 aaPredicted RBP29.16■■■□□ 2.26
ACTB-203ENST00000417101 FMNL2Q96PY5 1086 aa29.14■■■□□ 2.26
ACTB-203ENST00000417101 SIPA1L3O60292 1781 aaPredicted RBP29.13■■■□□ 2.25
ACTB-203ENST00000417101 A0A087WZG4 1122 aa29.13■■■□□ 2.25
ACTB-203ENST00000417101 BTBD11A6QL63 1104 aa29.13■■■□□ 2.25
ACTB-203ENST00000417101 SERPINB2P05120 415 aa29.13■■■□□ 2.25
ACTB-203ENST00000417101 KCNQ3O43525 872 aa29.12■■■□□ 2.25
ACTB-203ENST00000417101 ZNF330Q9Y3S2 320 aaPredicted RBP29.12■■■□□ 2.25
ACTB-203ENST00000417101 KIF3CO14782 793 aa29.11■■■□□ 2.25
ACTB-203ENST00000417101 C9orf131Q5VYM1 1079 aa29.11■■■□□ 2.25
ACTB-203ENST00000417101 BICDL1Q6ZP65 573 aa29.11■■■□□ 2.25
ACTB-203ENST00000417101 ARFGEF1Q9Y6D6 1849 aa29.1■■■□□ 2.25
ACTB-203ENST00000417101 RTF1Q92541 710 aaKnown RBP29.1■■■□□ 2.25
ACTB-203ENST00000417101 AFDNP55196 1824 aaKnown RBP29.09■■■□□ 2.25
ACTB-203ENST00000417101 A1BGP04217 495 aa29.09■■■□□ 2.25
ACTB-203ENST00000417101 IL6STP40189 918 aaPredicted RBP29.08■■■□□ 2.25
ACTB-203ENST00000417101 MCM10Q7L590 875 aa29.08■■■□□ 2.25
ACTB-203ENST00000417101 TBC1D2BQ9UPU7 963 aa29.08■■■□□ 2.25
ACTB-203ENST00000417101 NRXN2Q9P2S2 1712 aa29.07■■■□□ 2.24
ACTB-203ENST00000417101 TBC1D9BQ66K14 1250 aa29.06■■■□□ 2.24
ACTB-203ENST00000417101 NPM2Q86SE8 214 aaKnown RBP29.05■■■□□ 2.24
ACTB-203ENST00000417101 CARMIL3Q8ND23 1372 aa29.04■■■□□ 2.24
ACTB-203ENST00000417101 HSPA6P17066 643 aa29.04■■■□□ 2.24
ACTB-203ENST00000417101 DCTN1Q14203 1278 aa29.04■■■□□ 2.24
ACTB-203ENST00000417101 C2CD5Q86YS7 1000 aa29.03■■■□□ 2.24
ACTB-203ENST00000417101 NMRK2Q9NPI5 230 aa29.03■■■□□ 2.24
ACTB-203ENST00000417101 RNF181Q9P0P0 153 aa29.03■■■□□ 2.24
ACTB-203ENST00000417101 USP16Q9Y5T5 823 aa29.03■■■□□ 2.24
ACTB-203ENST00000417101 PRAMEF22A3QJZ6 481 aa29.01■■■□□ 2.23
ACTB-203ENST00000417101 H0YIN7 160 aa29.01■■■□□ 2.23
ACTB-203ENST00000417101 HTATSF1O43719 755 aaKnown RBP29■■■□□ 2.23
ACTB-203ENST00000417101 CAMTA2O94983 1202 aa29■■■□□ 2.23
ACTB-203ENST00000417101 PIP4K2AP48426 406 aaPredicted RBP29■■■□□ 2.23
ACTB-203ENST00000417101 TTLL6Q8N841 843 aa29■■■□□ 2.23
ACTB-203ENST00000417101 SCN7AQ01118 1682 aa28.99■■■□□ 2.23
ACTB-203ENST00000417101 SNRPA1P09661 255 aaKnown RBP28.99■■■□□ 2.23
ACTB-203ENST00000417101 RASSF7Q02833 373 aa28.98■■■□□ 2.23
ACTB-203ENST00000417101 DZIP3Q86Y13 1208 aaKnown RBP28.98■■■□□ 2.23
ACTB-203ENST00000417101 CCDC24Q8N4L8 307 aa28.98■■■□□ 2.23
ACTB-203ENST00000417101 TOMM70O94826 608 aa28.97■■■□□ 2.23
ACTB-203ENST00000417101 PRR5LQ6MZQ0 368 aa28.97■■■□□ 2.23
ACTB-203ENST00000417101 SETDB2Q96T68 719 aa28.97■■■□□ 2.23
ACTB-203ENST00000417101 BRIP1Q9BX63 1249 aa28.96■■■□□ 2.23
ACTB-203ENST00000417101 NEFMP07197 916 aa28.95■■■□□ 2.22
ACTB-203ENST00000417101 TAF7Q15545 349 aaPredicted RBP28.95■■■□□ 2.22
ACTB-203ENST00000417101 DLEC1Q9Y238 1755 aa28.95■■■□□ 2.22
ACTB-203ENST00000417101 PDE6BP35913 854 aa28.94■■■□□ 2.22
ACTB-203ENST00000417101 KDM2BQ8NHM5 1336 aa28.94■■■□□ 2.22
ACTB-203ENST00000417101 NPHP1O15259 732 aa28.93■■■□□ 2.22
ACTB-203ENST00000417101 CNBD1Q8NA66 436 aa28.93■■■□□ 2.22
ACTB-203ENST00000417101 ZNF622Q969S3 477 aaKnown RBP eCLIP28.93■■■□□ 2.22
ACTB-203ENST00000417101 MIS18AQ9NYP9 233 aa28.93■■■□□ 2.22
ACTB-203ENST00000417101 PDZRN3Q9UPQ7 1066 aa28.92■■■□□ 2.22
ACTB-203ENST00000417101 SBF1O95248 1867 aa28.91■■■□□ 2.22
ACTB-203ENST00000417101 LMNB1P20700 586 aa28.91■■■□□ 2.22
ACTB-203ENST00000417101 ANKRD31Q8N7Z5 1873 aa28.91■■■□□ 2.22
ACTB-203ENST00000417101 PRELPP51888 382 aa28.9■■■□□ 2.22
ACTB-203ENST00000417101 C16orf71Q8IYS4 520 aaPredicted RBP28.9■■■□□ 2.22
ACTB-203ENST00000417101 PLEKHF1Q96S99 279 aa28.9■■■□□ 2.22
ACTB-203ENST00000417101 NBPF26B4DH59 902 aa28.89■■■□□ 2.22
ACTB-203ENST00000417101 NBPF10Q6P3W6 841 aaKnown RBP28.89■■■□□ 2.22
ACTB-203ENST00000417101 NBPF15Q8N660 670 aa28.89■■■□□ 2.22
ACTB-203ENST00000417101 NFKBIEO00221 500 aa28.88■■■□□ 2.21
ACTB-203ENST00000417101 ST5P78524 1137 aa28.88■■■□□ 2.21
ACTB-203ENST00000417101 CLEC4GQ6UXB4 293 aa28.88■■■□□ 2.21
ACTB-203ENST00000417101 RRAGCQ9HB90 399 aa28.88■■■□□ 2.21
ACTB-203ENST00000417101 ZNF219Q9P2Y4 722 aaPredicted RBP28.88■■■□□ 2.21
ACTB-203ENST00000417101 ZNF652Q9Y2D9 606 aa28.88■■■□□ 2.21
ACTB-203ENST00000417101 BCORQ6W2J9 1755 aa28.88■■■□□ 2.21
ACTB-203ENST00000417101 NFE2L2Q16236 605 aa28.87■■■□□ 2.21
ACTB-203ENST00000417101 ZC3H4Q9UPT8 1303 aaKnown RBP28.87■■■□□ 2.21
ACTB-203ENST00000417101 RBM46Q8TBY0 533 aaKnown RBP28.86■■■□□ 2.21
ACTB-203ENST00000417101 C21orf2O43822 256 aa28.85■■■□□ 2.21
ACTB-203ENST00000417101 APLP1P51693 650 aa28.85■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms