RNA–Protein interactions for RNA: ENST00000416651.5

NIF3L1-206, Transcript of NGG1 interacting factor 3 like 1, human

TSL 2 BASIC

Gene NIF3L1, Length 967 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NIF3L1-206	ENST00000416651	N4BP2	Q86UW6	1770 aa	Predicted RBP	12.57	□□□□□ -0.4
NIF3L1-206	ENST00000416651	PHF14	O94880	888 aa		12.57	□□□□□ -0.4
NIF3L1-206	ENST00000416651	TAF1L	Q8IZX4	1826 aa		12.56	□□□□□ -0.4
NIF3L1-206	ENST00000416651	PCDHGA4	Q9Y5G9	962 aa		12.56	□□□□□ -0.4
NIF3L1-206	ENST00000416651	KIAA1210	Q9ULL0	1709 aa		12.56	□□□□□ -0.4
NIF3L1-206	ENST00000416651	MEGF6	O75095	1541 aa		12.56	□□□□□ -0.4
NIF3L1-206	ENST00000416651	TTC21A	Q8NDW8	1320 aa		12.56	□□□□□ -0.4
NIF3L1-206	ENST00000416651	KTN1	Q86UP2	1357 aa	Known RBP	12.56	□□□□□ -0.4
NIF3L1-206	ENST00000416651	FAM208A	Q9UK61	1670 aa	Known RBP	12.55	□□□□□ -0.4
NIF3L1-206	ENST00000416651	HSPA1A	P0DMV8	641 aa	Known RBP	12.55	□□□□□ -0.4
NIF3L1-206	ENST00000416651	HSPA1B	P0DMV9	641 aa	Known RBP	12.55	□□□□□ -0.4
NIF3L1-206	ENST00000416651	PXDNL	A1KZ92	1463 aa		12.54	□□□□□ -0.4
NIF3L1-206	ENST00000416651		A0A0G2JLW4	131 aa		12.54	□□□□□ -0.4
NIF3L1-206	ENST00000416651	RBM46	Q8TBY0	533 aa	Known RBP	12.54	□□□□□ -0.4
NIF3L1-206	ENST00000416651	BCS1L	Q9Y276	419 aa		12.54	□□□□□ -0.4
NIF3L1-206	ENST00000416651	USP31	Q70CQ4	1352 aa		12.54	□□□□□ -0.4
NIF3L1-206	ENST00000416651	USP47	Q96K76	1375 aa		12.54	□□□□□ -0.4
NIF3L1-206	ENST00000416651	KCP	Q6ZWJ8	1503 aa		12.53	□□□□□ -0.4
NIF3L1-206	ENST00000416651	ARHGAP27	Q6ZUM4	889 aa		12.53	□□□□□ -0.4
NIF3L1-206	ENST00000416651	USHBP1	Q8N6Y0	703 aa		12.53	□□□□□ -0.4
NIF3L1-206	ENST00000416651	ZCRB1	Q8TBF4	217 aa	Known RBP	12.53	□□□□□ -0.4
NIF3L1-206	ENST00000416651	STAC3	Q96MF2	364 aa		12.53	□□□□□ -0.4
NIF3L1-206	ENST00000416651	PLA2G2E	Q9NZK7	142 aa		12.53	□□□□□ -0.4
NIF3L1-206	ENST00000416651	C4B	P0C0L5	1744 aa		12.53	□□□□□ -0.4
NIF3L1-206	ENST00000416651	MON2	Q7Z3U7	1717 aa		12.53	□□□□□ -0.4
NIF3L1-206	ENST00000416651	SBNO2	Q9Y2G9	1366 aa		12.53	□□□□□ -0.4
NIF3L1-206	ENST00000416651	UBR3	Q6ZT12	1888 aa		12.53	□□□□□ -0.4
NIF3L1-206	ENST00000416651	CD163L1	Q9NR16	1453 aa		12.53	□□□□□ -0.4
NIF3L1-206	ENST00000416651	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.52	□□□□□ -0.41
NIF3L1-206	ENST00000416651	RRAGC	Q9HB90	399 aa		12.52	□□□□□ -0.41
NIF3L1-206	ENST00000416651	C9orf131	Q5VYM1	1079 aa		12.51	□□□□□ -0.41
NIF3L1-206	ENST00000416651	HCST	Q9UBK5	93 aa		12.51	□□□□□ -0.41
NIF3L1-206	ENST00000416651	EVC2	Q86UK5	1308 aa		12.51	□□□□□ -0.41
NIF3L1-206	ENST00000416651	LINC00116	Q8NCU8	138 aa		12.5	□□□□□ -0.41
NIF3L1-206	ENST00000416651	IP6K1	Q92551	441 aa		12.5	□□□□□ -0.41
NIF3L1-206	ENST00000416651	PALLD	Q8WX93	1383 aa		12.5	□□□□□ -0.41
NIF3L1-206	ENST00000416651	DPEP1	P16444	411 aa		12.49	□□□□□ -0.41
NIF3L1-206	ENST00000416651	MPRIP	Q6WCQ1	1025 aa		12.49	□□□□□ -0.41
NIF3L1-206	ENST00000416651	TMC2	Q8TDI7	906 aa		12.49	□□□□□ -0.41
NIF3L1-206	ENST00000416651	MMP10	P09238	476 aa		12.48	□□□□□ -0.41
NIF3L1-206	ENST00000416651	NBPF6	Q5VWK0	638 aa		12.48	□□□□□ -0.41
NIF3L1-206	ENST00000416651	AK7	Q96M32	723 aa		12.48	□□□□□ -0.41
NIF3L1-206	ENST00000416651	NBPF4	Q96M43	638 aa		12.48	□□□□□ -0.41
NIF3L1-206	ENST00000416651	KCNA3	P22001	575 aa		12.47	□□□□□ -0.41
NIF3L1-206	ENST00000416651	FSTL1	Q12841	308 aa		12.47	□□□□□ -0.41
NIF3L1-206	ENST00000416651	ITPK1	Q13572	414 aa		12.47	□□□□□ -0.41
NIF3L1-206	ENST00000416651	C16orf71	Q8IYS4	520 aa	Predicted RBP	12.47	□□□□□ -0.41
NIF3L1-206	ENST00000416651	FLAD1	Q8NFF5	587 aa		12.47	□□□□□ -0.41
NIF3L1-206	ENST00000416651	SLC12A5	Q9H2X9	1139 aa		12.47	□□□□□ -0.41
NIF3L1-206	ENST00000416651	KIF13B	Q9NQT8	1826 aa		12.46	□□□□□ -0.41
NIF3L1-206	ENST00000416651	MAP3K19	Q56UN5	1328 aa		12.46	□□□□□ -0.41
NIF3L1-206	ENST00000416651	ARHGAP33	O14559	1287 aa		12.46	□□□□□ -0.41
NIF3L1-206	ENST00000416651	FCHSD2	O94868	740 aa		12.46	□□□□□ -0.41
NIF3L1-206	ENST00000416651	HOXC9	P31274	260 aa		12.46	□□□□□ -0.41
NIF3L1-206	ENST00000416651	ADGRD1	Q6QNK2	874 aa		12.46	□□□□□ -0.41
NIF3L1-206	ENST00000416651	PKD1L3	Q7Z443	1732 aa		12.45	□□□□□ -0.42
NIF3L1-206	ENST00000416651	MAP2	P11137	1827 aa	Known RBP	12.45	□□□□□ -0.42
NIF3L1-206	ENST00000416651	ITGB4	P16144	1822 aa		12.45	□□□□□ -0.42
NIF3L1-206	ENST00000416651	BRCA1	P38398	1863 aa	Known RBP	12.44	□□□□□ -0.42
NIF3L1-206	ENST00000416651	CYP27B1	O15528	508 aa		12.44	□□□□□ -0.42
NIF3L1-206	ENST00000416651	PIGB	Q92521	554 aa		12.44	□□□□□ -0.42
NIF3L1-206	ENST00000416651	GNPAT	O15228	680 aa		12.43	□□□□□ -0.42
NIF3L1-206	ENST00000416651	TMC1	Q8TDI8	760 aa		12.43	□□□□□ -0.42
NIF3L1-206	ENST00000416651	RNF181	Q9P0P0	153 aa		12.43	□□□□□ -0.42
NIF3L1-206	ENST00000416651	C10orf71	Q711Q0	1435 aa		12.43	□□□□□ -0.42
NIF3L1-206	ENST00000416651	HS6ST3	Q8IZP7	471 aa		12.42	□□□□□ -0.42
NIF3L1-206	ENST00000416651	FOXN1	O15353	648 aa		12.41	□□□□□ -0.42
NIF3L1-206	ENST00000416651	SBF1	O95248	1867 aa		12.41	□□□□□ -0.42
NIF3L1-206	ENST00000416651	SSFA2	P28290	1259 aa		12.41	□□□□□ -0.42
NIF3L1-206	ENST00000416651	TGFB2	P61812	414 aa		12.41	□□□□□ -0.42
NIF3L1-206	ENST00000416651	RRS1	Q15050	365 aa	Known RBP	12.41	□□□□□ -0.42
NIF3L1-206	ENST00000416651	RASSF7	Q02833	373 aa		12.4	□□□□□ -0.42
NIF3L1-206	ENST00000416651	FAM161A	Q3B820	660 aa		12.4	□□□□□ -0.42
NIF3L1-206	ENST00000416651	SMC1B	Q8NDV3	1235 aa		12.4	□□□□□ -0.42
NIF3L1-206	ENST00000416651	L3MBTL2	Q969R5	705 aa		12.4	□□□□□ -0.42
NIF3L1-206	ENST00000416651	ASAP1	Q9ULH1	1129 aa		12.4	□□□□□ -0.42
NIF3L1-206	ENST00000416651		A0A1W2PP64	1363 aa		12.4	□□□□□ -0.42
NIF3L1-206	ENST00000416651	NSD3	Q9BZ95	1437 aa		12.39	□□□□□ -0.43
NIF3L1-206	ENST00000416651	LOC102724428	A0A0B4J2F2	783 aa		12.39	□□□□□ -0.43
NIF3L1-206	ENST00000416651	POTEC	B2RU33	542 aa		12.39	□□□□□ -0.43
NIF3L1-206	ENST00000416651	CHRNA5	P30532	468 aa		12.39	□□□□□ -0.43
NIF3L1-206	ENST00000416651	AMPH	P49418	695 aa		12.39	□□□□□ -0.43
NIF3L1-206	ENST00000416651	SIK1	P57059	783 aa		12.39	□□□□□ -0.43
NIF3L1-206	ENST00000416651	SLC4A9	Q96Q91	983 aa		12.39	□□□□□ -0.43
NIF3L1-206	ENST00000416651	MKRN1	Q9UHC7	482 aa	Known RBP	12.39	□□□□□ -0.43
NIF3L1-206	ENST00000416651	ARFGEF1	Q9Y6D6	1849 aa		12.39	□□□□□ -0.43
NIF3L1-206	ENST00000416651	DCAF5	Q96JK2	942 aa		12.38	□□□□□ -0.43
NIF3L1-206	ENST00000416651	TNRC6C	Q9HCJ0	1690 aa	Known RBP	12.38	□□□□□ -0.43
NIF3L1-206	ENST00000416651	KDM2B	Q8NHM5	1336 aa		12.37	□□□□□ -0.43
NIF3L1-206	ENST00000416651	EDC4	Q6P2E9	1401 aa	Known RBP	12.37	□□□□□ -0.43
NIF3L1-206	ENST00000416651	C4A	P0C0L4	1744 aa		12.37	□□□□□ -0.43
NIF3L1-206	ENST00000416651	TK2	O00142	265 aa		12.37	□□□□□ -0.43
NIF3L1-206	ENST00000416651	PLEKHG2	Q9H7P9	1386 aa		12.37	□□□□□ -0.43
NIF3L1-206	ENST00000416651	HR	O43593	1189 aa		12.36	□□□□□ -0.43
NIF3L1-206	ENST00000416651	PPP1R37	O75864	691 aa		12.36	□□□□□ -0.43
NIF3L1-206	ENST00000416651	GYS1	P13807	737 aa		12.36	□□□□□ -0.43
NIF3L1-206	ENST00000416651	TAT	P17735	454 aa	Predicted RBP	12.36	□□□□□ -0.43
NIF3L1-206	ENST00000416651	ATP6V1A	P38606	617 aa		12.36	□□□□□ -0.43
NIF3L1-206	ENST00000416651	PSEN2	P49810	448 aa		12.36	□□□□□ -0.43
NIF3L1-206	ENST00000416651	HSP90AB2P	Q58FF8	381 aa		12.36	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms