RNA–Protein interactions for RNA: ENST00000416445.6

CALCOCO2-203, Transcript of calcium binding and coiled-coil domain 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CALCOCO2, Length 1,438 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-203ENST00000416445 NRXN2Q9P2S2 1712 aa12.91□□□□□ -0.34
CALCOCO2-203ENST00000416445 U2AF1L5P0DN76 240 aaPredicted RBP12.9□□□□□ -0.34
CALCOCO2-203ENST00000416445 DPEP1P16444 411 aa12.9□□□□□ -0.34
CALCOCO2-203ENST00000416445 U2AF1Q01081 240 aaKnown RBP eCLIP12.9□□□□□ -0.34
CALCOCO2-203ENST00000416445 MCM10Q7L590 875 aa12.9□□□□□ -0.34
CALCOCO2-203ENST00000416445 NLGN1Q8N2Q7 840 aa12.9□□□□□ -0.34
CALCOCO2-203ENST00000416445 ARFGEF1Q9Y6D6 1849 aa12.9□□□□□ -0.35
CALCOCO2-203ENST00000416445 HMGB2P26583 209 aaKnown RBP12.89□□□□□ -0.35
CALCOCO2-203ENST00000416445 CANXP27824 592 aaKnown RBP12.89□□□□□ -0.35
CALCOCO2-203ENST00000416445 TM4SF1P30408 202 aa12.89□□□□□ -0.35
CALCOCO2-203ENST00000416445 PIP4K2AP48426 406 aaPredicted RBP12.89□□□□□ -0.35
CALCOCO2-203ENST00000416445 ZNF790Q6PG37 636 aa12.89□□□□□ -0.35
CALCOCO2-203ENST00000416445 GAS2L2Q8NHY3 880 aa12.89□□□□□ -0.35
CALCOCO2-203ENST00000416445 ADCY9O60503 1353 aa12.89□□□□□ -0.35
CALCOCO2-203ENST00000416445 COL15A1P39059 1388 aa12.89□□□□□ -0.35
CALCOCO2-203ENST00000416445 SCN7AQ01118 1682 aa12.89□□□□□ -0.35
CALCOCO2-203ENST00000416445 ANKRD31Q8N7Z5 1873 aa12.89□□□□□ -0.35
CALCOCO2-203ENST00000416445 ATP10DQ9P241 1426 aa12.89□□□□□ -0.35
CALCOCO2-203ENST00000416445 CARMIL3Q8ND23 1372 aa12.88□□□□□ -0.35
CALCOCO2-203ENST00000416445 HEG1Q9ULI3 1381 aa12.88□□□□□ -0.35
CALCOCO2-203ENST00000416445 POLRMTO00411 1230 aaKnown RBP12.88□□□□□ -0.35
CALCOCO2-203ENST00000416445 GRIN3BO60391 1043 aa12.88□□□□□ -0.35
CALCOCO2-203ENST00000416445 A1BGP04217 495 aa12.88□□□□□ -0.35
CALCOCO2-203ENST00000416445 CHRNA5P30532 468 aa12.88□□□□□ -0.35
CALCOCO2-203ENST00000416445 TEFQ10587 303 aa12.88□□□□□ -0.35
CALCOCO2-203ENST00000416445 NFIXQ14938 502 aa12.88□□□□□ -0.35
CALCOCO2-203ENST00000416445 CFAP53Q96M91 514 aa12.88□□□□□ -0.35
CALCOCO2-203ENST00000416445 PARP3Q9Y6F1 533 aa12.88□□□□□ -0.35
CALCOCO2-203ENST00000416445 BCORQ6W2J9 1755 aa12.87□□□□□ -0.35
CALCOCO2-203ENST00000416445 KDM3BQ7LBC6 1761 aa12.87□□□□□ -0.35
CALCOCO2-203ENST00000416445 DLEC1Q9Y238 1755 aa12.87□□□□□ -0.35
CALCOCO2-203ENST00000416445 NPM3O75607 178 aaKnown RBP12.87□□□□□ -0.35
CALCOCO2-203ENST00000416445 VSIG10Q8N0Z9 540 aa12.87□□□□□ -0.35
CALCOCO2-203ENST00000416445 MIS18AQ9NYP9 233 aa12.87□□□□□ -0.35
CALCOCO2-203ENST00000416445 COL11A2P13942 1736 aaPredicted RBP12.86□□□□□ -0.35
CALCOCO2-203ENST00000416445 EIF5P55010 431 aaKnown RBP12.86□□□□□ -0.35
CALCOCO2-203ENST00000416445 PLEKHF1Q96S99 279 aa12.86□□□□□ -0.35
CALCOCO2-203ENST00000416445 THUMPD2Q9BTF0 503 aaKnown RBP12.86□□□□□ -0.35
CALCOCO2-203ENST00000416445 NARFQ9UHQ1 456 aa12.86□□□□□ -0.35
CALCOCO2-203ENST00000416445 BCS1LQ9Y276 419 aa12.86□□□□□ -0.35
CALCOCO2-203ENST00000416445 USP16Q9Y5T5 823 aa12.86□□□□□ -0.35
CALCOCO2-203ENST00000416445 SBF1O95248 1867 aa12.86□□□□□ -0.35
CALCOCO2-203ENST00000416445 BTBD11A6QL63 1104 aa12.85□□□□□ -0.35
CALCOCO2-203ENST00000416445 FCHSD2O94868 740 aa12.85□□□□□ -0.35
CALCOCO2-203ENST00000416445 TTC5Q8N0Z6 440 aa12.85□□□□□ -0.35
CALCOCO2-203ENST00000416445 CCDC24Q8N4L8 307 aa12.85□□□□□ -0.35
CALCOCO2-203ENST00000416445 ZNF526Q8TF50 670 aaPredicted RBP12.85□□□□□ -0.35
CALCOCO2-203ENST00000416445 ZPR1O75312 459 aa12.84□□□□□ -0.35
CALCOCO2-203ENST00000416445 TGFB2P61812 414 aa12.84□□□□□ -0.35
CALCOCO2-203ENST00000416445 DDX10Q13206 875 aaKnown RBP12.84□□□□□ -0.35
CALCOCO2-203ENST00000416445 TBC1D2BQ9UPU7 963 aa12.84□□□□□ -0.35
CALCOCO2-203ENST00000416445 NUDCQ9Y266 331 aa12.84□□□□□ -0.35
CALCOCO2-203ENST00000416445 CACNA1SQ13698 1873 aa12.84□□□□□ -0.35
CALCOCO2-203ENST00000416445 CCDC88AQ3V6T2 1871 aa12.83□□□□□ -0.36
CALCOCO2-203ENST00000416445 C1QTNF8P60827 252 aa12.83□□□□□ -0.36
CALCOCO2-203ENST00000416445 TBC1D9BQ66K14 1250 aa12.83□□□□□ -0.36
CALCOCO2-203ENST00000416445 BICDL1Q6ZP65 573 aa12.83□□□□□ -0.36
CALCOCO2-203ENST00000416445 ZNF330Q9Y3S2 320 aaPredicted RBP12.83□□□□□ -0.36
CALCOCO2-203ENST00000416445 LAMB4A4D0S4 1761 aa12.83□□□□□ -0.36
CALCOCO2-203ENST00000416445 CNKSR2Q8WXI2 1034 aa12.82□□□□□ -0.36
CALCOCO2-203ENST00000416445 FMNL2Q96PY5 1086 aa12.82□□□□□ -0.36
CALCOCO2-203ENST00000416445 NBPF26B4DH59 902 aa12.81□□□□□ -0.36
CALCOCO2-203ENST00000416445 STARD3NLO95772 234 aa12.81□□□□□ -0.36
CALCOCO2-203ENST00000416445 SERPINB2P05120 415 aa12.81□□□□□ -0.36
CALCOCO2-203ENST00000416445 PRELPP51888 382 aa12.81□□□□□ -0.36
CALCOCO2-203ENST00000416445 NBPF10Q6P3W6 841 aaKnown RBP12.81□□□□□ -0.36
CALCOCO2-203ENST00000416445 NBPF15Q8N660 670 aa12.81□□□□□ -0.36
CALCOCO2-203ENST00000416445 CAMTA2O94983 1202 aa12.8□□□□□ -0.36
CALCOCO2-203ENST00000416445 ARHGAP27Q6ZUM4 889 aa12.8□□□□□ -0.36
CALCOCO2-203ENST00000416445 GIGYF1O75420 1035 aaPredicted RBP12.79□□□□□ -0.36
CALCOCO2-203ENST00000416445 IL6STP40189 918 aaPredicted RBP12.79□□□□□ -0.36
CALCOCO2-203ENST00000416445 RTF1Q92541 710 aaKnown RBP12.79□□□□□ -0.36
CALCOCO2-203ENST00000416445 PIM2Q9P1W9 311 aa12.79□□□□□ -0.36
CALCOCO2-203ENST00000416445 SLX4Q8IY92 1834 aa12.78□□□□□ -0.36
CALCOCO2-203ENST00000416445 NUP98P52948 1817 aa12.78□□□□□ -0.36
CALCOCO2-203ENST00000416445 RASSF7Q02833 373 aa12.78□□□□□ -0.36
CALCOCO2-203ENST00000416445 NFE2L2Q16236 605 aa12.78□□□□□ -0.36
CALCOCO2-203ENST00000416445 DALRD3Q5D0E6 543 aaKnown RBP12.78□□□□□ -0.36
CALCOCO2-203ENST00000416445 HTATSF1O43719 755 aaKnown RBP12.77□□□□□ -0.37
CALCOCO2-203ENST00000416445 TAF7Q15545 349 aaPredicted RBP12.77□□□□□ -0.37
CALCOCO2-203ENST00000416445 PRR5LQ6MZQ0 368 aa12.77□□□□□ -0.37
CALCOCO2-203ENST00000416445 GPBP1L1Q9HC44 474 aaPredicted RBP12.77□□□□□ -0.37
CALCOCO2-203ENST00000416445 TNRC6CQ9HCJ0 1690 aaKnown RBP12.76□□□□□ -0.37
CALCOCO2-203ENST00000416445 SENP3-EIF4A1A0A087X0R7 540 aa12.76□□□□□ -0.37
CALCOCO2-203ENST00000416445 KIF3CO14782 793 aa12.76□□□□□ -0.37
CALCOCO2-203ENST00000416445 SNRPA1P09661 255 aaKnown RBP12.76□□□□□ -0.37
CALCOCO2-203ENST00000416445 C9orf131Q5VYM1 1079 aa12.76□□□□□ -0.37
CALCOCO2-203ENST00000416445 DZIP3Q86Y13 1208 aaKnown RBP12.76□□□□□ -0.37
CALCOCO2-203ENST00000416445 CCDC146Q8IYE0 955 aa12.76□□□□□ -0.37
CALCOCO2-203ENST00000416445 TEX13AQ9BXU3 409 aaPredicted RBP12.76□□□□□ -0.37
CALCOCO2-203ENST00000416445 RRP7AQ9Y3A4 280 aaKnown RBP12.76□□□□□ -0.37
CALCOCO2-203ENST00000416445 FER1L6Q2WGJ9 1857 aa12.76□□□□□ -0.37
CALCOCO2-203ENST00000416445 PCNTO95613 3336 aa12.75□□□□□ -0.37
CALCOCO2-203ENST00000416445 TIAM2Q8IVF5 1701 aa12.75□□□□□ -0.37
CALCOCO2-203ENST00000416445 A0A087WZG4 1122 aa12.75□□□□□ -0.37
CALCOCO2-203ENST00000416445 EIF4A1P60842 406 aaKnown RBP12.75□□□□□ -0.37
CALCOCO2-203ENST00000416445 HLFQ16534 295 aa12.75□□□□□ -0.37
CALCOCO2-203ENST00000416445 C2CD5Q86YS7 1000 aa12.75□□□□□ -0.37
CALCOCO2-203ENST00000416445 SLC51AQ86UW1 340 aa12.74□□□□□ -0.37
CALCOCO2-203ENST00000416445 NMRK2Q9NPI5 230 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms