RNA–Protein interactions for RNA: ENST00000415997.1

APP-207, Transcript of amyloid beta precursor protein, humanhuman

TSL 3

Gene APP, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-207ENST00000415997 LRP6O75581 1613 aa5.46□□□□□ -1.54
APP-207ENST00000415997 RHOQP17081 205 aa5.46□□□□□ -1.54
APP-207ENST00000415997 SKIV2LQ15477 1246 aaKnown RBP5.46□□□□□ -1.54
APP-207ENST00000415997 PRICKLE2Q7Z3G6 844 aa5.46□□□□□ -1.54
APP-207ENST00000415997 RNF217Q8TC41 542 aa5.46□□□□□ -1.54
APP-207ENST00000415997 OCSTAMPQ9BR26 566 aa5.46□□□□□ -1.54
APP-207ENST00000415997 CDK13Q14004 1512 aaKnown RBP5.45□□□□□ -1.54
APP-207ENST00000415997 ERVH48-1M5A8F1 160 aa5.45□□□□□ -1.54
APP-207ENST00000415997 ADAMTS2O95450 1211 aa5.45□□□□□ -1.54
APP-207ENST00000415997 ADD1P35611 737 aaKnown RBP5.45□□□□□ -1.54
APP-207ENST00000415997 MAP3K10Q02779 954 aa5.45□□□□□ -1.54
APP-207ENST00000415997 NBPF20Q3BBV1 942 aa5.45□□□□□ -1.54
APP-207ENST00000415997 LYPD4Q6UWN0 246 aa5.45□□□□□ -1.54
APP-207ENST00000415997 TRIM52Q96A61 297 aa5.45□□□□□ -1.54
APP-207ENST00000415997 GPBP1L1Q9HC44 474 aaPredicted RBP5.45□□□□□ -1.54
APP-207ENST00000415997 CYLDQ9NQC7 956 aa5.45□□□□□ -1.54
APP-207ENST00000415997 SUPT6HQ7KZ85 1726 aaKnown RBP5.45□□□□□ -1.54
APP-207ENST00000415997 DEPDC5O75140 1603 aa5.45□□□□□ -1.54
APP-207ENST00000415997 SENP3-EIF4A1A0A087X0R7 540 aa5.44□□□□□ -1.54
APP-207ENST00000415997 ADH1AP07327 375 aa5.44□□□□□ -1.54
APP-207ENST00000415997 PTGIRP43119 386 aa5.44□□□□□ -1.54
APP-207ENST00000415997 ZNF772Q68DY9 489 aaPredicted RBP5.44□□□□□ -1.54
APP-207ENST00000415997 RIPOR1Q6ZS17 1223 aa5.44□□□□□ -1.54
APP-207ENST00000415997 LYSMD3Q7Z3D4 306 aa5.44□□□□□ -1.54
APP-207ENST00000415997 PNMA1Q8ND90 353 aa5.44□□□□□ -1.54
APP-207ENST00000415997 CUEDC1Q9NWM3 386 aaPredicted RBP5.44□□□□□ -1.54
APP-207ENST00000415997 CEP350Q5VT06 3117 aa5.44□□□□□ -1.54
APP-207ENST00000415997 RAPGEF6Q8TEU7 1601 aa5.44□□□□□ -1.54
APP-207ENST00000415997 ZC3H4Q9UPT8 1303 aaKnown RBP5.44□□□□□ -1.54
APP-207ENST00000415997 RGS12O14924 1447 aa5.43□□□□□ -1.54
APP-207ENST00000415997 GPR25O00155 361 aa5.43□□□□□ -1.54
APP-207ENST00000415997 MEN1O00255 615 aa5.43□□□□□ -1.54
APP-207ENST00000415997 ARHGEF15O94989 841 aa5.43□□□□□ -1.54
APP-207ENST00000415997 SLURP2P0DP57 97 aa5.43□□□□□ -1.54
APP-207ENST00000415997 RXRBP28702 533 aa5.43□□□□□ -1.54
APP-207ENST00000415997 FOXD4L5Q5VV16 416 aaPredicted RBP5.43□□□□□ -1.54
APP-207ENST00000415997 AFAP1Q8N556 730 aa5.43□□□□□ -1.54
APP-207ENST00000415997 FAM117AQ9C073 453 aa5.43□□□□□ -1.54
APP-207ENST00000415997 HMX1Q9NP08 348 aaPredicted RBP5.43□□□□□ -1.54
APP-207ENST00000415997 CTTNBP2Q8WZ74 1663 aa5.43□□□□□ -1.54
APP-207ENST00000415997 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.42□□□□□ -1.54
APP-207ENST00000415997 JCADQ9P266 1359 aa5.42□□□□□ -1.54
APP-207ENST00000415997 NPHP4O75161 1426 aaPredicted RBP5.42□□□□□ -1.54
APP-207ENST00000415997 XIRP1Q702N8 1843 aaKnown RBP5.42□□□□□ -1.54
APP-207ENST00000415997 LILRA1O75019 489 aa5.42□□□□□ -1.54
APP-207ENST00000415997 SH3D19Q5HYK7 790 aa5.42□□□□□ -1.54
APP-207ENST00000415997 SCARF2Q96GP6 870 aaPredicted RBP5.42□□□□□ -1.54
APP-207ENST00000415997 KDM4CQ9H3R0 1056 aa5.42□□□□□ -1.54
APP-207ENST00000415997 ESF1Q9H501 851 aaKnown RBP5.42□□□□□ -1.54
APP-207ENST00000415997 GPSM3Q9Y4H4 160 aa5.42□□□□□ -1.54
APP-207ENST00000415997 ROBO1Q9Y6N7 1651 aa5.42□□□□□ -1.54
APP-207ENST00000415997 CELA2BP08218 269 aaPredicted RBP5.41□□□□□ -1.54
APP-207ENST00000415997 USP17L8P0C7I0 530 aa5.41□□□□□ -1.54
APP-207ENST00000415997 KDF1Q8NAX2 398 aaPredicted RBP5.41□□□□□ -1.54
APP-207ENST00000415997 GAS2L1Q99501 681 aaPredicted RBP5.41□□□□□ -1.54
APP-207ENST00000415997 PCDHB9Q9Y5E1 797 aa5.41□□□□□ -1.54
APP-207ENST00000415997 KDM5DQ9BY66 1539 aa5.4□□□□□ -1.54
APP-207ENST00000415997 PLEKHD1A6NEE1 506 aa5.4□□□□□ -1.54
APP-207ENST00000415997 SRSF11Q05519 484 aaKnown RBP5.4□□□□□ -1.54
APP-207ENST00000415997 GAS6Q14393 721 aa5.4□□□□□ -1.54
APP-207ENST00000415997 PPP2R2DQ66LE6 453 aa5.4□□□□□ -1.54
APP-207ENST00000415997 KANK3Q6NY19 840 aa5.4□□□□□ -1.54
APP-207ENST00000415997 FOXR1Q6PIV2 292 aa5.4□□□□□ -1.54
APP-207ENST00000415997 NEDD1Q8NHV4 660 aa5.4□□□□□ -1.54
APP-207ENST00000415997 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.4□□□□□ -1.54
APP-207ENST00000415997 ENAMQ9NRM1 1142 aa5.4□□□□□ -1.54
APP-207ENST00000415997 DNMT3AQ9Y6K1 912 aaPredicted RBP5.4□□□□□ -1.54
APP-207ENST00000415997 SPATA31A6Q5VVP1 1343 aa5.4□□□□□ -1.55
APP-207ENST00000415997 COL16A1Q07092 1604 aaPredicted RBP5.4□□□□□ -1.55
APP-207ENST00000415997 NHSL1Q5SYE7 1610 aa5.4□□□□□ -1.55
APP-207ENST00000415997 IQGAP1P46940 1657 aa5.4□□□□□ -1.55
APP-207ENST00000415997 FGD6Q6ZV73 1430 aa5.4□□□□□ -1.55
APP-207ENST00000415997 ABCC1P33527 1531 aa5.39□□□□□ -1.55
APP-207ENST00000415997 SAMD9Q5K651 1589 aa5.39□□□□□ -1.55
APP-207ENST00000415997 ATP5J2-PTCD1G3V325 749 aa5.39□□□□□ -1.55
APP-207ENST00000415997 GIGYF1O75420 1035 aaPredicted RBP5.39□□□□□ -1.55
APP-207ENST00000415997 POU4F2Q12837 409 aa5.39□□□□□ -1.55
APP-207ENST00000415997 SLC27A3Q5K4L6 730 aa5.39□□□□□ -1.55
APP-207ENST00000415997 EFCAB2Q5VUJ9 269 aa5.39□□□□□ -1.55
APP-207ENST00000415997 ANKLE2Q86XL3 938 aa5.39□□□□□ -1.55
APP-207ENST00000415997 GTPBP3Q969Y2 492 aaKnown RBP5.39□□□□□ -1.55
APP-207ENST00000415997 DDRGK1Q96HY6 314 aa5.39□□□□□ -1.55
APP-207ENST00000415997 CLTCQ00610 1675 aaKnown RBP5.39□□□□□ -1.55
APP-207ENST00000415997 ZC3H13Q5T200 1668 aaKnown RBP5.39□□□□□ -1.55
APP-207ENST00000415997 CNTNAP5Q8WYK1 1306 aa5.39□□□□□ -1.55
APP-207ENST00000415997 KIDINS220Q9ULH0 1771 aa5.38□□□□□ -1.55
APP-207ENST00000415997 RNF144AP50876 292 aaPredicted RBP5.38□□□□□ -1.55
APP-207ENST00000415997 DBN1Q16643 649 aa5.38□□□□□ -1.55
APP-207ENST00000415997 ZNF837Q96EG3 531 aaPredicted RBP5.38□□□□□ -1.55
APP-207ENST00000415997 NLRP3Q96P20 1036 aa5.38□□□□□ -1.55
APP-207ENST00000415997 ATAD2Q6PL18 1390 aa5.38□□□□□ -1.55
APP-207ENST00000415997 MAP3K1Q13233 1512 aa5.38□□□□□ -1.55
APP-207ENST00000415997 PLXNC1O60486 1568 aa5.38□□□□□ -1.55
APP-207ENST00000415997 A0A1W2PRU2 124 aa5.37□□□□□ -1.55
APP-207ENST00000415997 ESPNB1AK53 854 aa5.37□□□□□ -1.55
APP-207ENST00000415997 IGHA1P01876 353 aa5.37□□□□□ -1.55
APP-207ENST00000415997 YY1P25490 414 aa5.37□□□□□ -1.55
APP-207ENST00000415997 RFC5P40937 340 aa5.37□□□□□ -1.55
APP-207ENST00000415997 TRIM22Q8IYM9 498 aa5.37□□□□□ -1.55
APP-207ENST00000415997 LRRC9Q6ZRR7 1453 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms