RNA–Protein interactions for RNA: ENST00000413392.5

CBX8-202, Transcript of chromobox 8, humanhuman

TSL 3

Gene CBX8, Length 777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX8-202ENST00000413392 PDGFDQ9GZP0 370 aaPredicted RBP22.46■■□□□ 1.19
CBX8-202ENST00000413392 MIS18AQ9NYP9 233 aa22.46■■□□□ 1.19
CBX8-202ENST00000413392 PHF14O94880 888 aa22.45■■□□□ 1.18
CBX8-202ENST00000413392 EIF4A1P60842 406 aaKnown RBP22.45■■□□□ 1.18
CBX8-202ENST00000413392 TRAPPC3LQ5T215 181 aa22.45■■□□□ 1.18
CBX8-202ENST00000413392 COL24A1Q17RW2 1714 aa22.45■■□□□ 1.18
CBX8-202ENST00000413392 CHL1O00533 1208 aa22.44■■□□□ 1.18
CBX8-202ENST00000413392 ZBTB7AO95365 584 aa22.44■■□□□ 1.18
CBX8-202ENST00000413392 INTS5Q6P9B9 1019 aaKnown RBP22.44■■□□□ 1.18
CBX8-202ENST00000413392 IFT57Q9NWB7 429 aa22.44■■□□□ 1.18
CBX8-202ENST00000413392 C4AP0C0L4 1744 aa22.43■■□□□ 1.18
CBX8-202ENST00000413392 GNAI1P63096 354 aa22.43■■□□□ 1.18
CBX8-202ENST00000413392 SOS1Q07889 1333 aaPredicted RBP22.42■■□□□ 1.18
CBX8-202ENST00000413392 WWC1Q8IX03 1113 aa22.42■■□□□ 1.18
CBX8-202ENST00000413392 LAS1LQ9Y4W2 734 aaKnown RBP22.42■■□□□ 1.18
CBX8-202ENST00000413392 GIGYF1O75420 1035 aaPredicted RBP22.41■■□□□ 1.18
CBX8-202ENST00000413392 AMIGO3Q86WK7 504 aa22.41■■□□□ 1.18
CBX8-202ENST00000413392 MIER1Q8N108 512 aa22.41■■□□□ 1.18
CBX8-202ENST00000413392 ZBTB1Q9Y2K1 713 aa22.41■■□□□ 1.18
CBX8-202ENST00000413392 IL16Q14005 1332 aa22.4■■□□□ 1.18
CBX8-202ENST00000413392 ZNF853P0CG23 659 aa22.4■■□□□ 1.18
CBX8-202ENST00000413392 RFC4P35249 363 aa22.4■■□□□ 1.18
CBX8-202ENST00000413392 NPM2Q86SE8 214 aaKnown RBP22.4■■□□□ 1.18
CBX8-202ENST00000413392 COL15A1P39059 1388 aa22.39■■□□□ 1.18
CBX8-202ENST00000413392 POLD1P28340 1107 aa22.39■■□□□ 1.17
CBX8-202ENST00000413392 IL6STP40189 918 aaPredicted RBP22.39■■□□□ 1.17
CBX8-202ENST00000413392 ARHGEF1Q92888 912 aaKnown RBP22.39■■□□□ 1.17
CBX8-202ENST00000413392 A0A087WZG4 1122 aa22.38■■□□□ 1.17
CBX8-202ENST00000413392 ATF5Q9Y2D1 282 aaPredicted RBP22.38■■□□□ 1.17
CBX8-202ENST00000413392 USP16Q9Y5T5 823 aa22.38■■□□□ 1.17
CBX8-202ENST00000413392 HOXB7P09629 217 aa22.37■■□□□ 1.17
CBX8-202ENST00000413392 CANXP27824 592 aaKnown RBP22.37■■□□□ 1.17
CBX8-202ENST00000413392 WDR63Q8IWG1 891 aa22.37■■□□□ 1.17
CBX8-202ENST00000413392 ERBB4Q15303 1308 aa22.36■■□□□ 1.17
CBX8-202ENST00000413392 PRAMEF22A3QJZ6 481 aa22.36■■□□□ 1.17
CBX8-202ENST00000413392 PTGER2P43116 358 aa22.36■■□□□ 1.17
CBX8-202ENST00000413392 EIF5P55010 431 aaKnown RBP22.36■■□□□ 1.17
CBX8-202ENST00000413392 MBIPQ9NS73 344 aa22.36■■□□□ 1.17
CBX8-202ENST00000413392 PPP1R1BQ9UD71 204 aaPredicted RBP22.36■■□□□ 1.17
CBX8-202ENST00000413392 USP42Q9H9J4 1324 aaKnown RBP22.35■■□□□ 1.17
CBX8-202ENST00000413392 ZPR1O75312 459 aa22.35■■□□□ 1.17
CBX8-202ENST00000413392 SGIP1Q9BQI5 828 aa22.35■■□□□ 1.17
CBX8-202ENST00000413392 A1BGP04217 495 aa22.34■■□□□ 1.17
CBX8-202ENST00000413392 SMIM5Q71RC9 77 aa22.34■■□□□ 1.17
CBX8-202ENST00000413392 NLGN1Q8N2Q7 840 aa22.34■■□□□ 1.17
CBX8-202ENST00000413392 CHMP4AQ9BY43 222 aa22.33■■□□□ 1.17
CBX8-202ENST00000413392 NARFQ9UHQ1 456 aa22.33■■□□□ 1.17
CBX8-202ENST00000413392 SCN7AQ01118 1682 aa22.33■■□□□ 1.16
CBX8-202ENST00000413392 SALL2Q9Y467 1007 aaPredicted RBP22.32■■□□□ 1.16
CBX8-202ENST00000413392 GYS1P13807 737 aa22.31■■□□□ 1.16
CBX8-202ENST00000413392 MSL1Q68DK7 614 aa22.31■■□□□ 1.16
CBX8-202ENST00000413392 ARXQ96QS3 562 aa22.31■■□□□ 1.16
CBX8-202ENST00000413392 ZNF330Q9Y3S2 320 aaPredicted RBP22.3■■□□□ 1.16
CBX8-202ENST00000413392 BCORQ6W2J9 1755 aa22.3■■□□□ 1.16
CBX8-202ENST00000413392 SENP3-EIF4A1A0A087X0R7 540 aa22.29■■□□□ 1.16
CBX8-202ENST00000413392 RGL2O15211 777 aa22.28■■□□□ 1.16
CBX8-202ENST00000413392 USPL1Q5W0Q7 1092 aa22.28■■□□□ 1.16
CBX8-202ENST00000413392 MYH16Q9H6N6 1097 aa22.28■■□□□ 1.16
CBX8-202ENST00000413392 ZNF521Q96K83 1311 aa22.28■■□□□ 1.16
CBX8-202ENST00000413392 NBPF26B4DH59 902 aa22.27■■□□□ 1.16
CBX8-202ENST00000413392 EIF2S2P20042 333 aaKnown RBP22.27■■□□□ 1.16
CBX8-202ENST00000413392 DUSP27Q5VZP5 1158 aa22.27■■□□□ 1.16
CBX8-202ENST00000413392 NBPF10Q6P3W6 841 aaKnown RBP22.27■■□□□ 1.16
CBX8-202ENST00000413392 DZIP3Q86Y13 1208 aaKnown RBP22.27■■□□□ 1.16
CBX8-202ENST00000413392 NBPF15Q8N660 670 aa22.27■■□□□ 1.16
CBX8-202ENST00000413392 SRP68Q9UHB9 627 aaKnown RBP22.27■■□□□ 1.16
CBX8-202ENST00000413392 HDGFL1Q5TGJ6 251 aa22.26■■□□□ 1.15
CBX8-202ENST00000413392 MMP10P09238 476 aa22.25■■□□□ 1.15
CBX8-202ENST00000413392 KRT24Q2M2I5 525 aa22.25■■□□□ 1.15
CBX8-202ENST00000413392 TSR2Q969E8 191 aaKnown RBP22.25■■□□□ 1.15
CBX8-202ENST00000413392 ZNF652Q9Y2D9 606 aa22.25■■□□□ 1.15
CBX8-202ENST00000413392 FANCIQ9NVI1 1328 aa22.25■■□□□ 1.15
CBX8-202ENST00000413392 PIP4K2AP48426 406 aaPredicted RBP22.24■■□□□ 1.15
CBX8-202ENST00000413392 GOLGA2Q08379 1002 aa22.24■■□□□ 1.15
CBX8-202ENST00000413392 FKBP8Q14318 412 aa22.24■■□□□ 1.15
CBX8-202ENST00000413392 CAMTA2O94983 1202 aa22.23■■□□□ 1.15
CBX8-202ENST00000413392 MYL6BP14649 208 aa22.23■■□□□ 1.15
CBX8-202ENST00000413392 CLEC4GQ6UXB4 293 aa22.23■■□□□ 1.15
CBX8-202ENST00000413392 KIF6Q6ZMV9 814 aa22.23■■□□□ 1.15
CBX8-202ENST00000413392 DDX21Q9NR30 783 aaKnown RBP eCLIP22.23■■□□□ 1.15
CBX8-202ENST00000413392 DBF4Q9UBU7 674 aaPredicted RBP22.23■■□□□ 1.15
CBX8-202ENST00000413392 TBC1D2BQ9UPU7 963 aa22.23■■□□□ 1.15
CBX8-202ENST00000413392 PARP3Q9Y6F1 533 aa22.23■■□□□ 1.15
CBX8-202ENST00000413392 E9PSI1 815 aa22.21■■□□□ 1.15
CBX8-202ENST00000413392 ERVV-1B6SEH8 477 aa22.2■■□□□ 1.14
CBX8-202ENST00000413392 PDIA6Q15084 440 aa22.2■■□□□ 1.14
CBX8-202ENST00000413392 TWISTNBQ3B726 338 aaPredicted RBP22.2■■□□□ 1.14
CBX8-202ENST00000413392 CCDC30Q5VVM6 783 aa22.2■■□□□ 1.14
CBX8-202ENST00000413392 C8orf58Q8NAV2 365 aa22.2■■□□□ 1.14
CBX8-202ENST00000413392 FHDC1Q9C0D6 1143 aaPredicted RBP22.2■■□□□ 1.14
CBX8-202ENST00000413392 BCL2L12Q9HB09 334 aa22.2■■□□□ 1.14
CBX8-202ENST00000413392 TM4SF1P30408 202 aa22.19■■□□□ 1.14
CBX8-202ENST00000413392 LRP10Q7Z4F1 713 aa22.19■■□□□ 1.14
CBX8-202ENST00000413392 NECTIN2Q92692 538 aa22.19■■□□□ 1.14
CBX8-202ENST00000413392 HYPKQ9NX55 129 aa22.19■■□□□ 1.14
CBX8-202ENST00000413392 CHPF2Q9P2E5 772 aa22.19■■□□□ 1.14
CBX8-202ENST00000413392 CD2APQ9Y5K6 639 aa22.19■■□□□ 1.14
CBX8-202ENST00000413392 MAP3K15Q6ZN16 1313 aa22.19■■□□□ 1.14
CBX8-202ENST00000413392 KIF13BQ9NQT8 1826 aa22.18■■□□□ 1.14
CBX8-202ENST00000413392 CARMIL3Q8ND23 1372 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms