RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-233ENST00000412685 RAB11FIP3O75154 756 aa20.22■□□□□ 0.83
HCG18-233ENST00000412685 SURF6O75683 361 aaKnown RBP20.22■□□□□ 0.83
HCG18-233ENST00000412685 PROSER3Q2NL68 480 aa20.22■□□□□ 0.83
HCG18-233ENST00000412685 FOXD4L1Q9NU39 408 aa20.22■□□□□ 0.83
HCG18-233ENST00000412685 IL27Q8NEV9 243 aa20.21■□□□□ 0.83
HCG18-233ENST00000412685 IL1RAPL2Q9NP60 686 aa20.21■□□□□ 0.83
HCG18-233ENST00000412685 PRAMEF22A3QJZ6 481 aa20.21■□□□□ 0.83
HCG18-233ENST00000412685 AOX1Q06278 1338 aa20.2■□□□□ 0.82
HCG18-233ENST00000412685 NPHP3Q7Z494 1330 aa20.2■□□□□ 0.82
HCG18-233ENST00000412685 RAB3GAP1Q15042 981 aa20.2■□□□□ 0.82
HCG18-233ENST00000412685 CADPS2Q86UW7 1296 aa20.2■□□□□ 0.82
HCG18-233ENST00000412685 MAP3K2Q9Y2U5 619 aa20.2■□□□□ 0.82
HCG18-233ENST00000412685 TNPO1Q92973 898 aaKnown RBP20.19■□□□□ 0.82
HCG18-233ENST00000412685 TRIM6-TRIM34B2RNG4 842 aa20.19■□□□□ 0.82
HCG18-233ENST00000412685 KSR2Q6VAB6 950 aa20.19■□□□□ 0.82
HCG18-233ENST00000412685 DDX11L8A8MPP1 907 aa20.18■□□□□ 0.82
HCG18-233ENST00000412685 RHPN1Q8TCX5 695 aa20.18■□□□□ 0.82
HCG18-233ENST00000412685 RILPL2Q969X0 211 aa20.18■□□□□ 0.82
HCG18-233ENST00000412685 ESYT1Q9BSJ8 1104 aa20.18■□□□□ 0.82
HCG18-233ENST00000412685 HYPKQ9NX55 129 aa20.18■□□□□ 0.82
HCG18-233ENST00000412685 ALDH1L1O75891 902 aa20.18■□□□□ 0.82
HCG18-233ENST00000412685 TATP17735 454 aaPredicted RBP20.18■□□□□ 0.82
HCG18-233ENST00000412685 CABLES1Q8TDN4 633 aa20.18■□□□□ 0.82
HCG18-233ENST00000412685 KDM6AO15550 1401 aaPredicted RBP20.17■□□□□ 0.82
HCG18-233ENST00000412685 TNS3Q68CZ2 1445 aa20.17■□□□□ 0.82
HCG18-233ENST00000412685 COL18A1P39060 1754 aa20.17■□□□□ 0.82
HCG18-233ENST00000412685 CHMLP26374 656 aa20.17■□□□□ 0.82
HCG18-233ENST00000412685 NUTM1Q86Y26 1132 aa20.17■□□□□ 0.82
HCG18-233ENST00000412685 KIF1BPQ96EK5 621 aa20.17■□□□□ 0.82
HCG18-233ENST00000412685 SPG7Q9UQ90 795 aa20.17■□□□□ 0.82
HCG18-233ENST00000412685 MEGF6O75095 1541 aa20.16■□□□□ 0.82
HCG18-233ENST00000412685 ZNF790Q6PG37 636 aa20.16■□□□□ 0.82
HCG18-233ENST00000412685 SLC52A2Q9HAB3 445 aa20.16■□□□□ 0.82
HCG18-233ENST00000412685 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.16■□□□□ 0.82
HCG18-233ENST00000412685 ST18O60284 1047 aa20.16■□□□□ 0.82
HCG18-233ENST00000412685 CSB-PGBD3P0DP91 1061 aa20.16■□□□□ 0.82
HCG18-233ENST00000412685 PHKG2P15735 406 aa20.16■□□□□ 0.82
HCG18-233ENST00000412685 DDX21Q9NR30 783 aaKnown RBP eCLIP20.16■□□□□ 0.82
HCG18-233ENST00000412685 TRAK2O60296 914 aa20.15■□□□□ 0.82
HCG18-233ENST00000412685 MTX1Q13505 466 aa20.15■□□□□ 0.82
HCG18-233ENST00000412685 UNC5CLQ8IV45 518 aa20.15■□□□□ 0.82
HCG18-233ENST00000412685 C9orf78Q9NZ63 289 aaPredicted RBP20.15■□□□□ 0.82
HCG18-233ENST00000412685 SCN11AQ9UI33 1791 aa20.15■□□□□ 0.82
HCG18-233ENST00000412685 SLC39A6Q13433 755 aa20.15■□□□□ 0.82
HCG18-233ENST00000412685 HSP90AB4PQ58FF6 505 aa20.15■□□□□ 0.82
HCG18-233ENST00000412685 GBP4Q96PP9 640 aa20.15■□□□□ 0.82
HCG18-233ENST00000412685 CRYBG1Q9Y4K1 1723 aa20.15■□□□□ 0.82
HCG18-233ENST00000412685 CHRNA2Q15822 529 aa20.14■□□□□ 0.82
HCG18-233ENST00000412685 CWF19L2Q2TBE0 894 aaKnown RBP20.14■□□□□ 0.81
HCG18-233ENST00000412685 ABCC6O95255 1503 aa20.14■□□□□ 0.81
HCG18-233ENST00000412685 PDIA6Q15084 440 aa20.13■□□□□ 0.81
HCG18-233ENST00000412685 NFATC2IPQ8NCF5 419 aa20.13■□□□□ 0.81
HCG18-233ENST00000412685 SPATA31A3Q5VYP0 1347 aa20.13■□□□□ 0.81
HCG18-233ENST00000412685 DDX58O95786 925 aaKnown RBP20.13■□□□□ 0.81
HCG18-233ENST00000412685 IFNL2Q8IZJ0 200 aa20.13■□□□□ 0.81
HCG18-233ENST00000412685 RTN4Q9NQC3 1192 aaKnown RBP20.13■□□□□ 0.81
HCG18-233ENST00000412685 LINS1Q8NG48 757 aa20.12■□□□□ 0.81
HCG18-233ENST00000412685 PI4K2BQ8TCG2 481 aa20.12■□□□□ 0.81
HCG18-233ENST00000412685 BRPF3Q9ULD4 1205 aa20.12■□□□□ 0.81
HCG18-233ENST00000412685 HDAC5Q9UQL6 1122 aa20.12■□□□□ 0.81
HCG18-233ENST00000412685 HSPA2P54652 639 aa20.12■□□□□ 0.81
HCG18-233ENST00000412685 AIMP1Q12904 312 aaKnown RBP20.11■□□□□ 0.81
HCG18-233ENST00000412685 ANO2Q9NQ90 1003 aa20.11■□□□□ 0.81
HCG18-233ENST00000412685 PLEKHG2Q9H7P9 1386 aa20.11■□□□□ 0.81
HCG18-233ENST00000412685 MCCP23508 829 aa20.1■□□□□ 0.81
HCG18-233ENST00000412685 OS9Q13438 667 aaPredicted RBP20.1■□□□□ 0.81
HCG18-233ENST00000412685 GZF1Q9H116 711 aaPredicted RBP20.1■□□□□ 0.81
HCG18-233ENST00000412685 SSFA2P28290 1259 aa20.1■□□□□ 0.81
HCG18-233ENST00000412685 CPDO75976 1380 aa20.1■□□□□ 0.81
HCG18-233ENST00000412685 GRM8O00222 908 aa20.09■□□□□ 0.81
HCG18-233ENST00000412685 CYP27B1O15528 508 aa20.09■□□□□ 0.81
HCG18-233ENST00000412685 DCAF5Q96JK2 942 aa20.09■□□□□ 0.81
HCG18-233ENST00000412685 C5P01031 1676 aa20.09■□□□□ 0.81
HCG18-233ENST00000412685 ZNF496Q96IT1 587 aaPredicted RBP20.09■□□□□ 0.81
HCG18-233ENST00000412685 UTYO14607 1347 aa20.08■□□□□ 0.81
HCG18-233ENST00000412685 MAP4K4O95819 1239 aaPredicted RBP20.08■□□□□ 0.8
HCG18-233ENST00000412685 ANAPC15P60006 121 aa20.08■□□□□ 0.8
HCG18-233ENST00000412685 USP42Q9H9J4 1324 aaKnown RBP20.08■□□□□ 0.8
HCG18-233ENST00000412685 MRC1P22897 1456 aa20.07■□□□□ 0.8
HCG18-233ENST00000412685 NEK4P51957 841 aa20.07■□□□□ 0.8
HCG18-233ENST00000412685 RIC3Q7Z5B4 369 aa20.07■□□□□ 0.8
HCG18-233ENST00000412685 PALD1Q9ULE6 856 aa20.07■□□□□ 0.8
HCG18-233ENST00000412685 MYL6BP14649 208 aa20.07■□□□□ 0.8
HCG18-233ENST00000412685 CLEC17AQ6ZS10 378 aa20.07■□□□□ 0.8
HCG18-233ENST00000412685 DNAJC5Q9H3Z4 198 aa20.07■□□□□ 0.8
HCG18-233ENST00000412685 L1TD1Q5T7N2 865 aaKnown RBP20.06■□□□□ 0.8
HCG18-233ENST00000412685 CLASRPQ8N2M8 674 aaKnown RBP20.06■□□□□ 0.8
HCG18-233ENST00000412685 SUCLG2Q96I99 432 aa20.06■□□□□ 0.8
HCG18-233ENST00000412685 IL25Q9H293 177 aa20.06■□□□□ 0.8
HCG18-233ENST00000412685 CWC22Q9HCG8 908 aaKnown RBP20.06■□□□□ 0.8
HCG18-233ENST00000412685 AK9Q5TCS8 1911 aa20.06■□□□□ 0.8
HCG18-233ENST00000412685 PKD1L3Q7Z443 1732 aa20.06■□□□□ 0.8
HCG18-233ENST00000412685 TTC41PQ6P2S7 1318 aa20.06■□□□□ 0.8
HCG18-233ENST00000412685 LARP1Q6PKG0 1096 aaKnown RBP20.06■□□□□ 0.8
HCG18-233ENST00000412685 ERC1Q8IUD2 1116 aa20.06■□□□□ 0.8
HCG18-233ENST00000412685 TTC5Q8N0Z6 440 aa20.06■□□□□ 0.8
HCG18-233ENST00000412685 KAZALD1Q96I82 304 aa20.06■□□□□ 0.8
HCG18-233ENST00000412685 PA2G4Q9UQ80 394 aaKnown RBP20.06■□□□□ 0.8
HCG18-233ENST00000412685 EPB41L2O43491 1005 aaKnown RBP20.05■□□□□ 0.8
HCG18-233ENST00000412685 IGKV5-2P06315 115 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms