RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 ZNF790Q6PG37 636 aa13.41□□□□□ -0.26
PKP4-203ENST00000411900 MCM10Q7L590 875 aa13.41□□□□□ -0.26
PKP4-203ENST00000411900 COL15A1P39059 1388 aa13.41□□□□□ -0.26
PKP4-203ENST00000411900 BTBD11A6QL63 1104 aa13.4□□□□□ -0.26
PKP4-203ENST00000411900 FCHSD2O94868 740 aa13.4□□□□□ -0.26
PKP4-203ENST00000411900 DDR1Q08345 913 aa13.4□□□□□ -0.26
PKP4-203ENST00000411900 VSIG10Q8N0Z9 540 aa13.4□□□□□ -0.26
PKP4-203ENST00000411900 ZNF330Q9Y3S2 320 aaPredicted RBP13.4□□□□□ -0.26
PKP4-203ENST00000411900 CEMIPQ8WUJ3 1361 aa13.4□□□□□ -0.26
PKP4-203ENST00000411900 HEG1Q9ULI3 1381 aa13.4□□□□□ -0.26
PKP4-203ENST00000411900 AFDNP55196 1824 aaKnown RBP13.39□□□□□ -0.27
PKP4-203ENST00000411900 DPEP1P16444 411 aa13.39□□□□□ -0.27
PKP4-203ENST00000411900 DDX10Q13206 875 aaKnown RBP13.39□□□□□ -0.27
PKP4-203ENST00000411900 RTF1Q92541 710 aaKnown RBP13.39□□□□□ -0.27
PKP4-203ENST00000411900 BRCA1P38398 1863 aaKnown RBP13.39□□□□□ -0.27
PKP4-203ENST00000411900 STARD3NLO95772 234 aa13.38□□□□□ -0.27
PKP4-203ENST00000411900 FMNL2Q96PY5 1086 aa13.38□□□□□ -0.27
PKP4-203ENST00000411900 BCS1LQ9Y276 419 aa13.38□□□□□ -0.27
PKP4-203ENST00000411900 PRAMEF22A3QJZ6 481 aa13.37□□□□□ -0.27
PKP4-203ENST00000411900 POLRMTO00411 1230 aaKnown RBP13.37□□□□□ -0.27
PKP4-203ENST00000411900 TGFB2P61812 414 aa13.37□□□□□ -0.27
PKP4-203ENST00000411900 NARFQ9UHQ1 456 aa13.37□□□□□ -0.27
PKP4-203ENST00000411900 A1BGP04217 495 aa13.36□□□□□ -0.27
PKP4-203ENST00000411900 TM4SF1P30408 202 aa13.36□□□□□ -0.27
PKP4-203ENST00000411900 PIP4K2AP48426 406 aaPredicted RBP13.36□□□□□ -0.27
PKP4-203ENST00000411900 NFIXQ14938 502 aa13.36□□□□□ -0.27
PKP4-203ENST00000411900 BICDL1Q6ZP65 573 aa13.36□□□□□ -0.27
PKP4-203ENST00000411900 ZNF526Q8TF50 670 aaPredicted RBP13.36□□□□□ -0.27
PKP4-203ENST00000411900 BCL2L12Q9HB09 334 aa13.36□□□□□ -0.27
PKP4-203ENST00000411900 SCN7AQ01118 1682 aa13.35□□□□□ -0.27
PKP4-203ENST00000411900 NEFMP07197 916 aa13.35□□□□□ -0.27
PKP4-203ENST00000411900 CHRNA5P30532 468 aa13.35□□□□□ -0.27
PKP4-203ENST00000411900 EIF5P55010 431 aaKnown RBP13.35□□□□□ -0.27
PKP4-203ENST00000411900 MIS18AQ9NYP9 233 aa13.35□□□□□ -0.27
PKP4-203ENST00000411900 TBC1D2BQ9UPU7 963 aa13.35□□□□□ -0.27
PKP4-203ENST00000411900 ATP10DQ9P241 1426 aa13.35□□□□□ -0.27
PKP4-203ENST00000411900 KCNA3P22001 575 aa13.34□□□□□ -0.27
PKP4-203ENST00000411900 PLEKHF1Q96S99 279 aa13.34□□□□□ -0.27
PKP4-203ENST00000411900 TEX13AQ9BXU3 409 aaPredicted RBP13.34□□□□□ -0.27
PKP4-203ENST00000411900 USP16Q9Y5T5 823 aa13.34□□□□□ -0.27
PKP4-203ENST00000411900 ARFGEF1Q9Y6D6 1849 aa13.34□□□□□ -0.27
PKP4-203ENST00000411900 NRXN2Q9P2S2 1712 aa13.33□□□□□ -0.27
PKP4-203ENST00000411900 ZNF316A6NFI3 1004 aaPredicted RBP13.33□□□□□ -0.28
PKP4-203ENST00000411900 SERPINB2P05120 415 aa13.33□□□□□ -0.28
PKP4-203ENST00000411900 ARHGAP27Q6ZUM4 889 aa13.33□□□□□ -0.28
PKP4-203ENST00000411900 THUMPD2Q9BTF0 503 aaKnown RBP13.33□□□□□ -0.28
PKP4-203ENST00000411900 KDM3BQ7LBC6 1761 aa13.32□□□□□ -0.28
PKP4-203ENST00000411900 A0A087WZG4 1122 aa13.32□□□□□ -0.28
PKP4-203ENST00000411900 HTATSF1O43719 755 aaKnown RBP13.32□□□□□ -0.28
PKP4-203ENST00000411900 GIGYF1O75420 1035 aaPredicted RBP13.32□□□□□ -0.28
PKP4-203ENST00000411900 RALBP1Q15311 655 aa13.32□□□□□ -0.28
PKP4-203ENST00000411900 TBC1D9BQ66K14 1250 aa13.32□□□□□ -0.28
PKP4-203ENST00000411900 PIM2Q9P1W9 311 aa13.32□□□□□ -0.28
PKP4-203ENST00000411900 MAPK8IP3Q9UPT6 1336 aa13.32□□□□□ -0.28
PKP4-203ENST00000411900 BCORQ6W2J9 1755 aa13.32□□□□□ -0.28
PKP4-203ENST00000411900 CARMIL3Q8ND23 1372 aa13.32□□□□□ -0.28
PKP4-203ENST00000411900 SNRPA1P09661 255 aaKnown RBP13.31□□□□□ -0.28
PKP4-203ENST00000411900 IL6STP40189 918 aaPredicted RBP13.31□□□□□ -0.28
PKP4-203ENST00000411900 TAF7Q15545 349 aaPredicted RBP13.31□□□□□ -0.28
PKP4-203ENST00000411900 NFE2L2Q16236 605 aa13.31□□□□□ -0.28
PKP4-203ENST00000411900 NPM2Q86SE8 214 aaKnown RBP13.31□□□□□ -0.28
PKP4-203ENST00000411900 CCDC24Q8N4L8 307 aa13.31□□□□□ -0.28
PKP4-203ENST00000411900 ANKRD31Q8N7Z5 1873 aa13.31□□□□□ -0.28
PKP4-203ENST00000411900 ADCY9O60503 1353 aa13.31□□□□□ -0.28
PKP4-203ENST00000411900 LAMB4A4D0S4 1761 aa13.3□□□□□ -0.28
PKP4-203ENST00000411900 DLEC1Q9Y238 1755 aa13.3□□□□□ -0.28
PKP4-203ENST00000411900 C1QTNF8P60827 252 aa13.3□□□□□ -0.28
PKP4-203ENST00000411900 DALRD3Q5D0E6 543 aaKnown RBP13.3□□□□□ -0.28
PKP4-203ENST00000411900 DZIP3Q86Y13 1208 aaKnown RBP13.29□□□□□ -0.28
PKP4-203ENST00000411900 GPBP1L1Q9HC44 474 aaPredicted RBP13.29□□□□□ -0.28
PKP4-203ENST00000411900 MYBBP1AQ9BQG0 1328 aaKnown RBP13.29□□□□□ -0.28
PKP4-203ENST00000411900 CACNA1SQ13698 1873 aa13.29□□□□□ -0.28
PKP4-203ENST00000411900 CAMTA2O94983 1202 aa13.28□□□□□ -0.28
PKP4-203ENST00000411900 CCDC146Q8IYE0 955 aa13.28□□□□□ -0.28
PKP4-203ENST00000411900 PNNQ9H307 717 aaKnown RBP13.28□□□□□ -0.28
PKP4-203ENST00000411900 COL11A2P13942 1736 aaPredicted RBP13.27□□□□□ -0.28
PKP4-203ENST00000411900 SENP3-EIF4A1A0A087X0R7 540 aa13.27□□□□□ -0.29
PKP4-203ENST00000411900 NBPF26B4DH59 902 aa13.27□□□□□ -0.29
PKP4-203ENST00000411900 NBPF10Q6P3W6 841 aaKnown RBP13.27□□□□□ -0.29
PKP4-203ENST00000411900 C2CD5Q86YS7 1000 aa13.27□□□□□ -0.29
PKP4-203ENST00000411900 NGEFQ8N5V2 710 aa13.27□□□□□ -0.29
PKP4-203ENST00000411900 NBPF15Q8N660 670 aa13.27□□□□□ -0.29
PKP4-203ENST00000411900 RRP7AQ9Y3A4 280 aaKnown RBP13.27□□□□□ -0.29
PKP4-203ENST00000411900 NPHP1O15259 732 aa13.26□□□□□ -0.29
PKP4-203ENST00000411900 SBF1O95248 1867 aa13.26□□□□□ -0.29
PKP4-203ENST00000411900 RIPK4P57078 832 aa13.26□□□□□ -0.29
PKP4-203ENST00000411900 NEUROD2Q15784 382 aa13.26□□□□□ -0.29
PKP4-203ENST00000411900 PNISRQ8TF01 805 aaKnown RBP13.26□□□□□ -0.29
PKP4-203ENST00000411900 SETDB2Q96T68 719 aa13.26□□□□□ -0.29
PKP4-203ENST00000411900 CCDC88AQ3V6T2 1871 aa13.25□□□□□ -0.29
PKP4-203ENST00000411900 H0YIN7 160 aa13.25□□□□□ -0.29
PKP4-203ENST00000411900 C9orf131Q5VYM1 1079 aa13.25□□□□□ -0.29
PKP4-203ENST00000411900 PRR5LQ6MZQ0 368 aa13.25□□□□□ -0.29
PKP4-203ENST00000411900 FAM177BA6PVY3 158 aa13.24□□□□□ -0.29
PKP4-203ENST00000411900 TMPOP42166 694 aaKnown RBP13.24□□□□□ -0.29
PKP4-203ENST00000411900 EIF4A1P60842 406 aaKnown RBP13.24□□□□□ -0.29
PKP4-203ENST00000411900 RASSF7Q02833 373 aa13.24□□□□□ -0.29
PKP4-203ENST00000411900 CNBD1Q8NA66 436 aa13.24□□□□□ -0.29
PKP4-203ENST00000411900 ZNF622Q969S3 477 aaKnown RBP eCLIP13.24□□□□□ -0.291e-11■□□□□ 8.8
PKP4-203ENST00000411900 ZNF219Q9P2Y4 722 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms