RNA–Protein interactions for RNA: ENST00000409772.5

PDE6D-202, Transcript of phosphodiesterase 6D, humanhuman

TSL 3 BASIC

Gene PDE6D, Length 672 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-202ENST00000409772 A0A087WZG4 1122 aa22.5■■□□□ 1.19
PDE6D-202ENST00000409772 TMPOP42166 694 aaKnown RBP22.5■■□□□ 1.19
PDE6D-202ENST00000409772 TJP1Q07157 1748 aa22.49■■□□□ 1.19
PDE6D-202ENST00000409772 UBR2Q8IWV8 1755 aa22.49■■□□□ 1.19
PDE6D-202ENST00000409772 GYS1P13807 737 aa22.48■■□□□ 1.19
PDE6D-202ENST00000409772 BABAM1Q9NWV8 329 aa22.48■■□□□ 1.19
PDE6D-202ENST00000409772 SOS1Q07889 1333 aaPredicted RBP22.48■■□□□ 1.19
PDE6D-202ENST00000409772 KCNQ3O43525 872 aa22.47■■□□□ 1.19
PDE6D-202ENST00000409772 CANXP27824 592 aaKnown RBP22.47■■□□□ 1.19
PDE6D-202ENST00000409772 ZBTB1Q9Y2K1 713 aa22.47■■□□□ 1.19
PDE6D-202ENST00000409772 MMP10P09238 476 aa22.46■■□□□ 1.19
PDE6D-202ENST00000409772 IL6STP40189 918 aaPredicted RBP22.46■■□□□ 1.19
PDE6D-202ENST00000409772 CCDC146Q8IYE0 955 aa22.46■■□□□ 1.19
PDE6D-202ENST00000409772 NARFQ9UHQ1 456 aa22.46■■□□□ 1.19
PDE6D-202ENST00000409772 PARP3Q9Y6F1 533 aa22.46■■□□□ 1.19
PDE6D-202ENST00000409772 USP42Q9H9J4 1324 aaKnown RBP22.46■■□□□ 1.19
PDE6D-202ENST00000409772 DLG5Q8TDM6 1919 aa22.45■■□□□ 1.18
PDE6D-202ENST00000409772 NEUROD2Q15784 382 aa22.45■■□□□ 1.18
PDE6D-202ENST00000409772 EIF5P55010 431 aaKnown RBP22.44■■□□□ 1.18
PDE6D-202ENST00000409772 MIS18AQ9NYP9 233 aa22.44■■□□□ 1.18
PDE6D-202ENST00000409772 COL15A1P39059 1388 aa22.43■■□□□ 1.18
PDE6D-202ENST00000409772 USP16Q9Y5T5 823 aa22.43■■□□□ 1.18
PDE6D-202ENST00000409772 A1BGP04217 495 aa22.41■■□□□ 1.18
PDE6D-202ENST00000409772 GPR162Q16538 588 aa22.41■■□□□ 1.18
PDE6D-202ENST00000409772 USPL1Q5W0Q7 1092 aa22.41■■□□□ 1.18
PDE6D-202ENST00000409772 THUMPD2Q9BTF0 503 aaKnown RBP22.41■■□□□ 1.18
PDE6D-202ENST00000409772 SRP68Q9UHB9 627 aaKnown RBP22.41■■□□□ 1.18
PDE6D-202ENST00000409772 TSPYL4Q9UJ04 414 aa22.41■■□□□ 1.18
PDE6D-202ENST00000409772 EIF4A1P60842 406 aaKnown RBP22.4■■□□□ 1.18
PDE6D-202ENST00000409772 FKBP8Q14318 412 aa22.4■■□□□ 1.18
PDE6D-202ENST00000409772 RRP7AQ9Y3A4 280 aaKnown RBP22.4■■□□□ 1.18
PDE6D-202ENST00000409772 GIGYF1O75420 1035 aaPredicted RBP22.38■■□□□ 1.17
PDE6D-202ENST00000409772 TM4SF1P30408 202 aa22.38■■□□□ 1.17
PDE6D-202ENST00000409772 TGFB2P61812 414 aa22.38■■□□□ 1.17
PDE6D-202ENST00000409772 CALD1Q05682 793 aaKnown RBP22.38■■□□□ 1.17
PDE6D-202ENST00000409772 NLGN2Q8NFZ4 835 aa22.38■■□□□ 1.17
PDE6D-202ENST00000409772 MRS2Q9HD23 443 aa22.38■■□□□ 1.17
PDE6D-202ENST00000409772 ZNF330Q9Y3S2 320 aaPredicted RBP22.38■■□□□ 1.17
PDE6D-202ENST00000409772 GRIN3BO60391 1043 aa22.37■■□□□ 1.17
PDE6D-202ENST00000409772 TRIM35Q9UPQ4 493 aa22.37■■□□□ 1.17
PDE6D-202ENST00000409772 APAF1O14727 1248 aa22.36■■□□□ 1.17
PDE6D-202ENST00000409772 C4AP0C0L4 1744 aa22.36■■□□□ 1.17
PDE6D-202ENST00000409772 PELP1Q8IZL8 1130 aaKnown RBP22.35■■□□□ 1.17
PDE6D-202ENST00000409772 TBC1D2BQ9UPU7 963 aa22.35■■□□□ 1.17
PDE6D-202ENST00000409772 PRAMEF22A3QJZ6 481 aa22.34■■□□□ 1.17
PDE6D-202ENST00000409772 CHL1O00533 1208 aa22.34■■□□□ 1.17
PDE6D-202ENST00000409772 DZIP3Q86Y13 1208 aaKnown RBP22.34■■□□□ 1.17
PDE6D-202ENST00000409772 RGL2O15211 777 aa22.33■■□□□ 1.17
PDE6D-202ENST00000409772 CLEC4GQ6UXB4 293 aa22.33■■□□□ 1.17
PDE6D-202ENST00000409772 ZNF652Q9Y2D9 606 aa22.33■■□□□ 1.17
PDE6D-202ENST00000409772 POLRMTO00411 1230 aaKnown RBP22.32■■□□□ 1.16
PDE6D-202ENST00000409772 CCDC184Q52MB2 194 aa22.32■■□□□ 1.16
PDE6D-202ENST00000409772 CFAP44Q96MT7 982 aa22.32■■□□□ 1.16
PDE6D-202ENST00000409772 LAS1LQ9Y4W2 734 aaKnown RBP22.32■■□□□ 1.16
PDE6D-202ENST00000409772 KDM3BQ7LBC6 1761 aa22.32■■□□□ 1.16
PDE6D-202ENST00000409772 ERBB4Q15303 1308 aa22.31■■□□□ 1.16
PDE6D-202ENST00000409772 NFIXQ14938 502 aa22.31■■□□□ 1.16
PDE6D-202ENST00000409772 BCL2L12Q9HB09 334 aa22.31■■□□□ 1.16
PDE6D-202ENST00000409772 DDR1Q08345 913 aa22.3■■□□□ 1.16
PDE6D-202ENST00000409772 NCBP3Q53F19 620 aaKnown RBP22.3■■□□□ 1.16
PDE6D-202ENST00000409772 SETDB2Q96T68 719 aa22.3■■□□□ 1.16
PDE6D-202ENST00000409772 NBPF26B4DH59 902 aa22.29■■□□□ 1.16
PDE6D-202ENST00000409772 SERPINB2P05120 415 aa22.29■■□□□ 1.16
PDE6D-202ENST00000409772 GNAI1P63096 354 aa22.29■■□□□ 1.16
PDE6D-202ENST00000409772 NBPF10Q6P3W6 841 aaKnown RBP22.29■■□□□ 1.16
PDE6D-202ENST00000409772 NBPF15Q8N660 670 aa22.29■■□□□ 1.16
PDE6D-202ENST00000409772 CAMTA2O94983 1202 aa22.28■■□□□ 1.16
PDE6D-202ENST00000409772 YY1P25490 414 aa22.28■■□□□ 1.16
PDE6D-202ENST00000409772 PIP4K2AP48426 406 aaPredicted RBP22.27■■□□□ 1.16
PDE6D-202ENST00000409772 BICDL1Q6ZP65 573 aa22.27■■□□□ 1.16
PDE6D-202ENST00000409772 C10orf71Q711Q0 1435 aa22.27■■□□□ 1.16
PDE6D-202ENST00000409772 CHMP4AQ9BY43 222 aa22.27■■□□□ 1.16
PDE6D-202ENST00000409772 IFT57Q9NWB7 429 aa22.27■■□□□ 1.16
PDE6D-202ENST00000409772 HOXB7P09629 217 aa22.26■■□□□ 1.15
PDE6D-202ENST00000409772 EIF2S2P20042 333 aaKnown RBP22.26■■□□□ 1.15
PDE6D-202ENST00000409772 CCDC27Q2M243 656 aa22.26■■□□□ 1.15
PDE6D-202ENST00000409772 TBC1D9BQ66K14 1250 aa22.26■■□□□ 1.15
PDE6D-202ENST00000409772 PDZRN3Q9UPQ7 1066 aa22.26■■□□□ 1.15
PDE6D-202ENST00000409772 A0A0G2JLW4 131 aa22.25■■□□□ 1.15
PDE6D-202ENST00000409772 ERVV-1B6SEH8 477 aa22.25■■□□□ 1.15
PDE6D-202ENST00000409772 KIF6Q6ZMV9 814 aa22.25■■□□□ 1.15
PDE6D-202ENST00000409772 CARMIL3Q8ND23 1372 aa22.25■■□□□ 1.15
PDE6D-202ENST00000409772 NPHP1O15259 732 aa22.24■■□□□ 1.15
PDE6D-202ENST00000409772 YBX3P16989 372 aaKnown RBP eCLIP22.24■■□□□ 1.15
PDE6D-202ENST00000409772 PIM2Q9P1W9 311 aa22.24■■□□□ 1.15
PDE6D-202ENST00000409772 KIF13BQ9NQT8 1826 aa22.24■■□□□ 1.15
PDE6D-202ENST00000409772 ZNF853P0CG23 659 aa22.23■■□□□ 1.15
PDE6D-202ENST00000409772 MYL6BP14649 208 aa22.23■■□□□ 1.15
PDE6D-202ENST00000409772 DPEP1P16444 411 aa22.23■■□□□ 1.15
PDE6D-202ENST00000409772 NGEFQ8N5V2 710 aa22.23■■□□□ 1.15
PDE6D-202ENST00000409772 LAMB4A4D0S4 1761 aa22.22■■□□□ 1.15
PDE6D-202ENST00000409772 TPTE2Q6XPS3 522 aa22.21■■□□□ 1.15
PDE6D-202ENST00000409772 PXDNLA1KZ92 1463 aa22.21■■□□□ 1.15
PDE6D-202ENST00000409772 PDE6BP35913 854 aa22.2■■□□□ 1.14
PDE6D-202ENST00000409772 ST5P78524 1137 aa22.2■■□□□ 1.14
PDE6D-202ENST00000409772 FAM9BQ8IZU0 186 aa22.2■■□□□ 1.14
PDE6D-202ENST00000409772 BRIP1Q9BX63 1249 aa22.2■■□□□ 1.14
PDE6D-202ENST00000409772 MBIPQ9NS73 344 aa22.2■■□□□ 1.14
PDE6D-202ENST00000409772 UTRNP46939 3433 aa22.2■■□□□ 1.14
PDE6D-202ENST00000409772 H0YIN7 160 aa22.19■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms