RNA–Protein interactions for RNA: ENST00000409530.5

SHANK2-204, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5 BASIC

Gene SHANK2, Length 2,123 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-204ENST00000409530 HEG1Q9ULI3 1381 aa19.94■□□□□ 0.78
SHANK2-204ENST00000409530 F6X3S4 739 aa19.94■□□□□ 0.78
SHANK2-204ENST00000409530 SNRPA1P09661 255 aaKnown RBP19.94■□□□□ 0.78
SHANK2-204ENST00000409530 PDE3AQ14432 1141 aa19.94■□□□□ 0.78
SHANK2-204ENST00000409530 PTF1AQ7RTS3 328 aa19.94■□□□□ 0.78
SHANK2-204ENST00000409530 HOXB7P09629 217 aa19.93■□□□□ 0.78
SHANK2-204ENST00000409530 FLIIQ13045 1269 aa19.93■□□□□ 0.78
SHANK2-204ENST00000409530 SLC4A10Q6U841 1118 aa19.93■□□□□ 0.78
SHANK2-204ENST00000409530 PPP4R2Q9NY27 417 aa19.92■□□□□ 0.78
SHANK2-204ENST00000409530 AIMP1Q12904 312 aaKnown RBP19.91■□□□□ 0.78
SHANK2-204ENST00000409530 ZNF330Q9Y3S2 320 aaPredicted RBP19.91■□□□□ 0.78
SHANK2-204ENST00000409530 CCDC136Q96JN2 1154 aa19.91■□□□□ 0.78
SHANK2-204ENST00000409530 SOS1Q07889 1333 aaPredicted RBP19.91■□□□□ 0.78
SHANK2-204ENST00000409530 BRPF1P55201 1214 aaPredicted RBP19.9■□□□□ 0.78
SHANK2-204ENST00000409530 MVPQ14764 893 aaKnown RBP19.9■□□□□ 0.78
SHANK2-204ENST00000409530 RGS12O14924 1447 aa19.9■□□□□ 0.78
SHANK2-204ENST00000409530 API5Q9BZZ5 524 aaKnown RBP19.9■□□□□ 0.78
SHANK2-204ENST00000409530 DBF4Q9UBU7 674 aaPredicted RBP19.9■□□□□ 0.78
SHANK2-204ENST00000409530 CACNA1FO60840 1977 aa19.89■□□□□ 0.77
SHANK2-204ENST00000409530 DNAJC10Q8IXB1 793 aa19.89■□□□□ 0.77
SHANK2-204ENST00000409530 RBM6P78332 1123 aaKnown RBP19.88■□□□□ 0.77
SHANK2-204ENST00000409530 BTAF1O14981 1849 aa19.88■□□□□ 0.77
SHANK2-204ENST00000409530 PTPRCP08575 1304 aa19.88■□□□□ 0.77
SHANK2-204ENST00000409530 MS4A1P11836 297 aa19.88■□□□□ 0.77
SHANK2-204ENST00000409530 ABCC4O15439 1325 aa19.87■□□□□ 0.77
SHANK2-204ENST00000409530 NHSQ6T4R5 1651 aa19.87■□□□□ 0.77
SHANK2-204ENST00000409530 PALLDQ8WX93 1383 aa19.87■□□□□ 0.77
SHANK2-204ENST00000409530 ONECUT3O60422 494 aaPredicted RBP19.87■□□□□ 0.77
SHANK2-204ENST00000409530 A1BGP04217 495 aa19.87■□□□□ 0.77
SHANK2-204ENST00000409530 KCNQ4P56696 695 aa19.87■□□□□ 0.77
SHANK2-204ENST00000409530 ERICH6BQ5W0A0 696 aa19.87■□□□□ 0.77
SHANK2-204ENST00000409530 KRT27Q7Z3Y8 459 aa19.87■□□□□ 0.77
SHANK2-204ENST00000409530 ARHGAP45Q92619 1136 aa19.87■□□□□ 0.77
SHANK2-204ENST00000409530 SLC4A9Q96Q91 983 aa19.87■□□□□ 0.77
SHANK2-204ENST00000409530 RGS17Q9UGC6 210 aaPredicted RBP19.87■□□□□ 0.77
SHANK2-204ENST00000409530 SBF2Q86WG5 1849 aa19.86■□□□□ 0.77
SHANK2-204ENST00000409530 TJP1Q07157 1748 aa19.85■□□□□ 0.77
SHANK2-204ENST00000409530 RXRBP28702 533 aa19.85■□□□□ 0.77
SHANK2-204ENST00000409530 PDIA6Q15084 440 aa19.85■□□□□ 0.77
SHANK2-204ENST00000409530 POTEAQ6S8J7 498 aa19.85■□□□□ 0.77
SHANK2-204ENST00000409530 DDX21Q9NR30 783 aaKnown RBP eCLIP19.85■□□□□ 0.77
SHANK2-204ENST00000409530 ARXQ96QS3 562 aa19.84■□□□□ 0.77
SHANK2-204ENST00000409530 C1orf115Q9H7X2 142 aa19.84■□□□□ 0.77
SHANK2-204ENST00000409530 XAGE3Q8WTP9 111 aa19.84■□□□□ 0.77
SHANK2-204ENST00000409530 PI4KAP2A4QPH2 592 aa19.83■□□□□ 0.77
SHANK2-204ENST00000409530 ATP6V1AP38606 617 aa19.83■□□□□ 0.77
SHANK2-204ENST00000409530 PI4KAP1Q8N8J0 262 aa19.83■□□□□ 0.77
SHANK2-204ENST00000409530 CHMP4AQ9BY43 222 aa19.83■□□□□ 0.77
SHANK2-204ENST00000409530 DDX19BQ9UMR2 479 aa19.83■□□□□ 0.77
SHANK2-204ENST00000409530 HYPKQ9NX55 129 aa19.82■□□□□ 0.76
SHANK2-204ENST00000409530 NBPF26B4DH59 902 aa19.82■□□□□ 0.76
SHANK2-204ENST00000409530 NBPF14Q5TI25 921 aa19.82■□□□□ 0.76
SHANK2-204ENST00000409530 NBPF10Q6P3W6 841 aaKnown RBP19.82■□□□□ 0.76
SHANK2-204ENST00000409530 COPS6Q7L5N1 327 aa19.82■□□□□ 0.76
SHANK2-204ENST00000409530 NBPF15Q8N660 670 aa19.82■□□□□ 0.76
SHANK2-204ENST00000409530 LOC102724428A0A0B4J2F2 783 aa19.81■□□□□ 0.76
SHANK2-204ENST00000409530 SIK1P57059 783 aa19.81■□□□□ 0.76
SHANK2-204ENST00000409530 ADCY9O60503 1353 aa19.81■□□□□ 0.76
SHANK2-204ENST00000409530 MAP3K2Q9Y2U5 619 aa19.81■□□□□ 0.76
SHANK2-204ENST00000409530 TRIM37O94972 964 aa19.8■□□□□ 0.76
SHANK2-204ENST00000409530 STARD3NLO95772 234 aa19.79■□□□□ 0.76
SHANK2-204ENST00000409530 RIC3Q7Z5B4 369 aa19.79■□□□□ 0.76
SHANK2-204ENST00000409530 ITPK1Q13572 414 aa19.78■□□□□ 0.76
SHANK2-204ENST00000409530 VSIG10Q8N0Z9 540 aa19.78■□□□□ 0.76
SHANK2-204ENST00000409530 DNAAF4Q8WXU2 420 aa19.78■□□□□ 0.76
SHANK2-204ENST00000409530 ZBTB1Q9Y2K1 713 aa19.78■□□□□ 0.76
SHANK2-204ENST00000409530 SMARCC1Q92922 1105 aaPredicted RBP19.78■□□□□ 0.76
SHANK2-204ENST00000409530 MEIS3Q99687 375 aa19.78■□□□□ 0.76
SHANK2-204ENST00000409530 ARFGEF2Q9Y6D5 1785 aa19.77■□□□□ 0.76
SHANK2-204ENST00000409530 TTLL7Q6ZT98 887 aa19.77■□□□□ 0.76
SHANK2-204ENST00000409530 ZBTB3Q9H5J0 574 aa19.77■□□□□ 0.76
SHANK2-204ENST00000409530 DDX58O95786 925 aaKnown RBP19.76■□□□□ 0.75
SHANK2-204ENST00000409530 CYP19A1P11511 503 aaPredicted RBP19.76■□□□□ 0.75
SHANK2-204ENST00000409530 INTS3Q68E01 1043 aaKnown RBP19.76■□□□□ 0.75
SHANK2-204ENST00000409530 PCDHB15Q9Y5E8 787 aa19.76■□□□□ 0.75
SHANK2-204ENST00000409530 N4BP2Q86UW6 1770 aaPredicted RBP19.76■□□□□ 0.75
SHANK2-204ENST00000409530 CWF19L2Q2TBE0 894 aaKnown RBP19.76■□□□□ 0.75
SHANK2-204ENST00000409530 FAM196AQ6ZSG2 479 aa19.76■□□□□ 0.75
SHANK2-204ENST00000409530 LRP10Q7Z4F1 713 aa19.76■□□□□ 0.75
SHANK2-204ENST00000409530 TEX13AQ9BXU3 409 aaPredicted RBP19.76■□□□□ 0.75
SHANK2-204ENST00000409530 CCT4P50991 539 aaKnown RBP19.75■□□□□ 0.75
SHANK2-204ENST00000409530 KSR2Q6VAB6 950 aa19.75■□□□□ 0.75
SHANK2-204ENST00000409530 ILDR1Q86SU0 546 aaPredicted RBP19.75■□□□□ 0.75
SHANK2-204ENST00000409530 ZBTB7BO15156 539 aaPredicted RBP19.75■□□□□ 0.75
SHANK2-204ENST00000409530 PXDNLA1KZ92 1463 aa19.74■□□□□ 0.75
SHANK2-204ENST00000409530 CRKLP46109 303 aaKnown RBP19.74■□□□□ 0.75
SHANK2-204ENST00000409530 MYD88Q99836 296 aa19.74■□□□□ 0.75
SHANK2-204ENST00000409530 SRCIN1Q9C0H9 1055 aa19.74■□□□□ 0.75
SHANK2-204ENST00000409530 ZBTB40Q9NUA8 1239 aa19.74■□□□□ 0.75
SHANK2-204ENST00000409530 AFDNP55196 1824 aaKnown RBP19.73■□□□□ 0.75
SHANK2-204ENST00000409530 COL5A3P25940 1745 aaPredicted RBP19.73■□□□□ 0.75
SHANK2-204ENST00000409530 ANKRD13DQ6ZTN6 518 aa19.73■□□□□ 0.75
SHANK2-204ENST00000409530 CCNL1Q9UK58 526 aaPredicted RBP19.73■□□□□ 0.75
SHANK2-204ENST00000409530 ERBB4Q15303 1308 aa19.73■□□□□ 0.75
SHANK2-204ENST00000409530 LINC00116Q8NCU8 138 aa19.73■□□□□ 0.75
SHANK2-204ENST00000409530 MYH14Q7Z406 1995 aaKnown RBP19.72■□□□□ 0.75
SHANK2-204ENST00000409530 SMIM5Q71RC9 77 aa19.72■□□□□ 0.75
SHANK2-204ENST00000409530 NPM2Q86SE8 214 aaKnown RBP19.72■□□□□ 0.75
SHANK2-204ENST00000409530 SKAP1Q86WV1 359 aa19.72■□□□□ 0.75
SHANK2-204ENST00000409530 BCL11BQ9C0K0 894 aaPredicted RBP19.72■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms