RNA–Protein interactions for RNA: ENST00000407144.6

CUEDC1-202, Transcript of CUE domain containing 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CUEDC1, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1-202ENST00000407144 TDRD7Q8NHU6 1098 aaKnown RBP26.53■■□□□ 1.84
CUEDC1-202ENST00000407144 NRBP1Q9UHY1 535 aa26.53■■□□□ 1.84
CUEDC1-202ENST00000407144 PTPRCP08575 1304 aa26.52■■□□□ 1.84
CUEDC1-202ENST00000407144 ERBB3P21860 1342 aa26.52■■□□□ 1.84
CUEDC1-202ENST00000407144 FIBPO43427 364 aa26.52■■□□□ 1.84
CUEDC1-202ENST00000407144 GNAI1P63096 354 aa26.52■■□□□ 1.84
CUEDC1-202ENST00000407144 TYRO3Q06418 890 aa26.52■■□□□ 1.84
CUEDC1-202ENST00000407144 MAP3K11Q16584 847 aa26.52■■□□□ 1.84
CUEDC1-202ENST00000407144 NOL8Q76FK4 1167 aaKnown RBP26.52■■□□□ 1.84
CUEDC1-202ENST00000407144 RTF1Q92541 710 aaKnown RBP26.52■■□□□ 1.84
CUEDC1-202ENST00000407144 ZNF592Q92610 1267 aa26.52■■□□□ 1.84
CUEDC1-202ENST00000407144 PDE1AP54750 535 aa26.51■■□□□ 1.84
CUEDC1-202ENST00000407144 TRERF1Q96PN7 1200 aa26.51■■□□□ 1.84
CUEDC1-202ENST00000407144 TSPYL6Q8N831 410 aa26.51■■□□□ 1.83
CUEDC1-202ENST00000407144 RSPH14Q9UHP6 348 aa26.51■■□□□ 1.83
CUEDC1-202ENST00000407144 SYT1P21579 422 aa26.5■■□□□ 1.83
CUEDC1-202ENST00000407144 TPM4P67936 248 aa26.5■■□□□ 1.83
CUEDC1-202ENST00000407144 TRIM5Q9C035 493 aa26.5■■□□□ 1.83
CUEDC1-202ENST00000407144 PNPLA6Q8IY17 1366 aa26.5■■□□□ 1.83
CUEDC1-202ENST00000407144 KIF1BO60333 1816 aa26.49■■□□□ 1.83
CUEDC1-202ENST00000407144 LUZP1Q86V48 1076 aa26.49■■□□□ 1.83
CUEDC1-202ENST00000407144 AEBP1Q8IUX7 1158 aa26.49■■□□□ 1.83
CUEDC1-202ENST00000407144 CBX8Q9HC52 389 aa26.49■■□□□ 1.83
CUEDC1-202ENST00000407144 RAD50Q92878 1312 aa26.49■■□□□ 1.83
CUEDC1-202ENST00000407144 CLTCQ00610 1675 aaKnown RBP26.49■■□□□ 1.83
CUEDC1-202ENST00000407144 DIAPH1O60610 1272 aaKnown RBP26.48■■□□□ 1.83
CUEDC1-202ENST00000407144 ZNF853P0CG23 659 aa26.48■■□□□ 1.83
CUEDC1-202ENST00000407144 SECISBP2LQ93073 1101 aaKnown RBP26.48■■□□□ 1.83
CUEDC1-202ENST00000407144 TUBGCP6Q96RT7 1819 aa26.48■■□□□ 1.83
CUEDC1-202ENST00000407144 PLPPR3Q6T4P5 718 aa26.48■■□□□ 1.83
CUEDC1-202ENST00000407144 LRRC8AQ8IWT6 810 aa26.47■■□□□ 1.83
CUEDC1-202ENST00000407144 NUP62CLQ9H1M0 184 aa26.47■■□□□ 1.83
CUEDC1-202ENST00000407144 CLIP2Q9UDT6 1046 aa26.47■■□□□ 1.83
CUEDC1-202ENST00000407144 PLA2G4AP47712 749 aa26.47■■□□□ 1.83
CUEDC1-202ENST00000407144 TWISTNBQ3B726 338 aaPredicted RBP26.47■■□□□ 1.83
CUEDC1-202ENST00000407144 NOL12Q9UGY1 213 aaKnown RBP eCLIP26.47■■□□□ 1.83
CUEDC1-202ENST00000407144 V9GYY5 206 aaPredicted RBP26.47■■□□□ 1.83
CUEDC1-202ENST00000407144 ELP1O95163 1332 aa26.47■■□□□ 1.83
CUEDC1-202ENST00000407144 PTPRMP28827 1452 aa26.47■■□□□ 1.83
CUEDC1-202ENST00000407144 VWDEQ8N2E2 1590 aa26.47■■□□□ 1.83
CUEDC1-202ENST00000407144 DHX16O60231 1041 aaKnown RBP26.46■■□□□ 1.83
CUEDC1-202ENST00000407144 PNMA6AP0CW24 399 aaPredicted RBP26.46■■□□□ 1.83
CUEDC1-202ENST00000407144 L2HGDHQ9H9P8 463 aa26.46■■□□□ 1.83
CUEDC1-202ENST00000407144 ANKRD26Q9UPS8 1709 aa26.46■■□□□ 1.83
CUEDC1-202ENST00000407144 LRRC7Q96NW7 1537 aa26.46■■□□□ 1.83
CUEDC1-202ENST00000407144 UPF3BQ9BZI7 483 aaKnown RBP26.46■■□□□ 1.83
CUEDC1-202ENST00000407144 ADGRB1O14514 1584 aa26.45■■□□□ 1.82
CUEDC1-202ENST00000407144 AATKQ6ZMQ8 1374 aa26.45■■□□□ 1.82
CUEDC1-202ENST00000407144 ANO2Q9NQ90 1003 aa26.45■■□□□ 1.82
CUEDC1-202ENST00000407144 ATP8B1O43520 1251 aa26.44■■□□□ 1.82
CUEDC1-202ENST00000407144 CAVIN2O95810 425 aa26.44■■□□□ 1.82
CUEDC1-202ENST00000407144 RBM43Q6ZSC3 357 aaKnown RBP26.44■■□□□ 1.82
CUEDC1-202ENST00000407144 CHMLP26374 656 aa26.44■■□□□ 1.82
CUEDC1-202ENST00000407144 CASQ1P31415 396 aa26.44■■□□□ 1.82
CUEDC1-202ENST00000407144 CEBPAP49715 358 aaPredicted RBP26.44■■□□□ 1.82
CUEDC1-202ENST00000407144 GTF3C6Q969F1 213 aa26.44■■□□□ 1.82
CUEDC1-202ENST00000407144 CWC15Q9P013 229 aaKnown RBP26.44■■□□□ 1.82
CUEDC1-202ENST00000407144 GPS2Q13227 327 aa26.43■■□□□ 1.82
CUEDC1-202ENST00000407144 NFATC2IPQ8NCF5 419 aa26.43■■□□□ 1.82
CUEDC1-202ENST00000407144 BRMS1Q9HCU9 246 aa26.43■■□□□ 1.82
CUEDC1-202ENST00000407144 EVC2Q86UK5 1308 aa26.43■■□□□ 1.82
CUEDC1-202ENST00000407144 HMMRO75330 724 aa26.43■■□□□ 1.82
CUEDC1-202ENST00000407144 ZRANB2O95218 330 aaKnown RBP eCLIP26.43■■□□□ 1.82
CUEDC1-202ENST00000407144 CLCN6P51797 869 aa26.43■■□□□ 1.82
CUEDC1-202ENST00000407144 SRPK2P78362 688 aaKnown RBP26.43■■□□□ 1.82
CUEDC1-202ENST00000407144 CCDC144BQ3MJ40 725 aa26.43■■□□□ 1.82
CUEDC1-202ENST00000407144 ANO6Q4KMQ2 910 aa26.43■■□□□ 1.82
CUEDC1-202ENST00000407144 SYT10Q6XYQ8 523 aa26.43■■□□□ 1.82
CUEDC1-202ENST00000407144 CCDC144CPQ8IYA2 1237 aa26.43■■□□□ 1.82
CUEDC1-202ENST00000407144 TRAK1Q9UPV9 953 aa26.43■■□□□ 1.82
CUEDC1-202ENST00000407144 HSPA4P34932 840 aa26.42■■□□□ 1.82
CUEDC1-202ENST00000407144 DNM1Q05193 864 aaKnown RBP26.42■■□□□ 1.82
CUEDC1-202ENST00000407144 NFE2L2Q16236 605 aa26.42■■□□□ 1.82
CUEDC1-202ENST00000407144 SARM1Q6SZW1 724 aa26.42■■□□□ 1.82
CUEDC1-202ENST00000407144 POLKQ9UBT6 870 aa26.42■■□□□ 1.82
CUEDC1-202ENST00000407144 SMC3Q9UQE7 1217 aa26.42■■□□□ 1.82
CUEDC1-202ENST00000407144 SALL3Q9BXA9 1300 aa26.42■■□□□ 1.82
CUEDC1-202ENST00000407144 MYO1CO00159 1063 aa26.41■■□□□ 1.82
CUEDC1-202ENST00000407144 UBXN6Q9BZV1 441 aa26.41■■□□□ 1.82
CUEDC1-202ENST00000407144 MBIPQ9NS73 344 aa26.41■■□□□ 1.82
CUEDC1-202ENST00000407144 C3P01024 1663 aa26.41■■□□□ 1.82
CUEDC1-202ENST00000407144 USP27XA6NNY8 438 aa26.41■■□□□ 1.82
CUEDC1-202ENST00000407144 ICE2Q659A1 982 aa26.41■■□□□ 1.82
CUEDC1-202ENST00000407144 KIAA0232Q92628 1395 aa26.41■■□□□ 1.82
CUEDC1-202ENST00000407144 GTF2A1P52655 376 aaPredicted RBP26.4■■□□□ 1.82
CUEDC1-202ENST00000407144 TPRNQ4KMQ1 711 aa26.4■■□□□ 1.82
CUEDC1-202ENST00000407144 KRBA2Q6ZNG9 492 aa26.4■■□□□ 1.82
CUEDC1-202ENST00000407144 MRFAP1L1Q96HT8 127 aa26.4■■□□□ 1.82
CUEDC1-202ENST00000407144 TTC14Q96N46 770 aa26.4■■□□□ 1.82
CUEDC1-202ENST00000407144 TUBB4AP04350 444 aa26.4■■□□□ 1.82
CUEDC1-202ENST00000407144 LIMCH1Q9UPQ0 1083 aa26.4■■□□□ 1.82
CUEDC1-202ENST00000407144 MTMR6Q9Y217 621 aa26.4■■□□□ 1.82
CUEDC1-202ENST00000407144 FILIP1Q7Z7B0 1213 aa26.39■■□□□ 1.82
CUEDC1-202ENST00000407144 CCAR2Q8N163 923 aaKnown RBP26.39■■□□□ 1.82
CUEDC1-202ENST00000407144 NEK11Q8NG66 645 aa26.39■■□□□ 1.82
CUEDC1-202ENST00000407144 ARGLU1Q9NWB6 273 aaPredicted RBP26.39■■□□□ 1.82
CUEDC1-202ENST00000407144 ABCC3O15438 1527 aa26.39■■□□□ 1.81
CUEDC1-202ENST00000407144 C14orf93Q9H972 538 aaKnown RBP26.39■■□□□ 1.81
CUEDC1-202ENST00000407144 TULP4Q9NRJ4 1543 aa26.38■■□□□ 1.81
CUEDC1-202ENST00000407144 CCDC93Q567U6 631 aa26.38■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms