RNA–Protein interactions for RNA: ENST00000405271.5

EPCAM-202, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 5 BASIC

Gene EPCAM, Length 1,530 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-202ENST00000405271 SNRPA1P09661 255 aaKnown RBP28.2■■■□□ 2.1
EPCAM-202ENST00000405271 SLC27A3Q5K4L6 730 aa28.2■■■□□ 2.1
EPCAM-202ENST00000405271 SSH1Q8WYL5 1049 aa28.2■■■□□ 2.1
EPCAM-202ENST00000405271 SLC15A2Q16348 729 aa28.19■■■□□ 2.1
EPCAM-202ENST00000405271 SMARCC1Q92922 1105 aaPredicted RBP28.19■■■□□ 2.1
EPCAM-202ENST00000405271 STK32BQ9NY57 414 aa28.19■■■□□ 2.1
EPCAM-202ENST00000405271 BRPF1P55201 1214 aaPredicted RBP28.18■■■□□ 2.1
EPCAM-202ENST00000405271 CCDC30Q5VVM6 783 aa28.18■■■□□ 2.1
EPCAM-202ENST00000405271 VSIG10Q8N0Z9 540 aa28.18■■■□□ 2.1
EPCAM-202ENST00000405271 BCAR3O75815 825 aa28.18■■■□□ 2.1
EPCAM-202ENST00000405271 RRP1P56182 461 aaKnown RBP28.18■■■□□ 2.1
EPCAM-202ENST00000405271 KCNQ4P56696 695 aa28.18■■■□□ 2.1
EPCAM-202ENST00000405271 HDGFL1Q5TGJ6 251 aa28.18■■■□□ 2.1
EPCAM-202ENST00000405271 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.18■■■□□ 2.1
EPCAM-202ENST00000405271 KIF16BQ96L93 1317 aa28.17■■■□□ 2.1
EPCAM-202ENST00000405271 PALLDQ8WX93 1383 aa28.17■■■□□ 2.1
EPCAM-202ENST00000405271 BCL2L13Q9BXK5 485 aa28.16■■■□□ 2.1
EPCAM-202ENST00000405271 PDGFDQ9GZP0 370 aaPredicted RBP28.16■■■□□ 2.1
EPCAM-202ENST00000405271 PTCD1O75127 700 aaKnown RBP28.15■■■□□ 2.1
EPCAM-202ENST00000405271 STK31Q9BXU1 1019 aa28.15■■■□□ 2.1
EPCAM-202ENST00000405271 MRPL50Q8N5N7 158 aaKnown RBP28.13■■■□□ 2.09
EPCAM-202ENST00000405271 PRAMEF22A3QJZ6 481 aa28.13■■■□□ 2.09
EPCAM-202ENST00000405271 RBM42Q9BTD8 480 aaKnown RBP28.13■■■□□ 2.09
EPCAM-202ENST00000405271 TEX13AQ9BXU3 409 aaPredicted RBP28.13■■■□□ 2.09
EPCAM-202ENST00000405271 CCNL1Q9UK58 526 aaPredicted RBP28.13■■■□□ 2.09
EPCAM-202ENST00000405271 EIF2S2P20042 333 aaKnown RBP28.12■■■□□ 2.09
EPCAM-202ENST00000405271 ZNF827Q17R98 1081 aa28.12■■■□□ 2.09
EPCAM-202ENST00000405271 MYH14Q7Z406 1995 aaKnown RBP28.1■■■□□ 2.09
EPCAM-202ENST00000405271 ERBB4Q15303 1308 aa28.1■■■□□ 2.09
EPCAM-202ENST00000405271 AKT1S1Q96B36 256 aa28.1■■■□□ 2.09
EPCAM-202ENST00000405271 DBF4Q9UBU7 674 aaPredicted RBP28.09■■■□□ 2.09
EPCAM-202ENST00000405271 LRP5O75197 1615 aa28.09■■■□□ 2.09
EPCAM-202ENST00000405271 TCERG1O14776 1098 aaKnown RBP28.08■■■□□ 2.09
EPCAM-202ENST00000405271 CANXP27824 592 aaKnown RBP28.08■■■□□ 2.09
EPCAM-202ENST00000405271 NECTIN2Q92692 538 aa28.08■■■□□ 2.09
EPCAM-202ENST00000405271 ARFGEF2Q9Y6D5 1785 aa28.08■■■□□ 2.09
EPCAM-202ENST00000405271 LOC102724428A0A0B4J2F2 783 aa28.08■■■□□ 2.08
EPCAM-202ENST00000405271 SIK1P57059 783 aa28.08■■■□□ 2.08
EPCAM-202ENST00000405271 SPON1Q9HCB6 807 aa28.08■■■□□ 2.08
EPCAM-202ENST00000405271 USP16Q9Y5T5 823 aa28.08■■■□□ 2.08
EPCAM-202ENST00000405271 IPO8O15397 1037 aaKnown RBP28.07■■■□□ 2.08
EPCAM-202ENST00000405271 SLC4A2P04920 1241 aa28.07■■■□□ 2.08
EPCAM-202ENST00000405271 ZKSCAN2Q63HK3 967 aa28.07■■■□□ 2.08
EPCAM-202ENST00000405271 CHPF2Q9P2E5 772 aa28.07■■■□□ 2.08
EPCAM-202ENST00000405271 NEFLP07196 543 aa28.06■■■□□ 2.08
EPCAM-202ENST00000405271 FRAT1Q92837 279 aaPredicted RBP28.06■■■□□ 2.08
EPCAM-202ENST00000405271 SLC4A9Q96Q91 983 aa28.06■■■□□ 2.08
EPCAM-202ENST00000405271 PTPRCP08575 1304 aa28.05■■■□□ 2.08
EPCAM-202ENST00000405271 DNAJC10Q8IXB1 793 aa28.05■■■□□ 2.08
EPCAM-202ENST00000405271 ARHGAP45Q92619 1136 aa28.05■■■□□ 2.08
EPCAM-202ENST00000405271 DDX21Q9NR30 783 aaKnown RBP eCLIP28.05■■■□□ 2.08
EPCAM-202ENST00000405271 ZBTB7AO95365 584 aa28.04■■■□□ 2.08
EPCAM-202ENST00000405271 NOB1Q9ULX3 412 aaKnown RBP28.04■■■□□ 2.08
EPCAM-202ENST00000405271 PLIN1O60240 522 aa28.03■■■□□ 2.08
EPCAM-202ENST00000405271 STARD3NLO95772 234 aa28.03■■■□□ 2.08
EPCAM-202ENST00000405271 TFCP2L1Q9NZI6 479 aa28.03■■■□□ 2.08
EPCAM-202ENST00000405271 C4BP0C0L5 1744 aa28.03■■■□□ 2.08
EPCAM-202ENST00000405271 MS4A1P11836 297 aa28.02■■■□□ 2.08
EPCAM-202ENST00000405271 ATP6V1AP38606 617 aa28.02■■■□□ 2.08
EPCAM-202ENST00000405271 ATF7IPQ6VMQ6 1270 aa28.02■■■□□ 2.08
EPCAM-202ENST00000405271 HYPKQ9NX55 129 aa28.02■■■□□ 2.08
EPCAM-202ENST00000405271 AFDNP55196 1824 aaKnown RBP28.01■■■□□ 2.08
EPCAM-202ENST00000405271 PDE3AQ14432 1141 aa28.01■■■□□ 2.07
EPCAM-202ENST00000405271 PXDNLA1KZ92 1463 aa28■■■□□ 2.07
EPCAM-202ENST00000405271 ANKRD36CQ5JPF3 1778 aa28■■■□□ 2.07
EPCAM-202ENST00000405271 FLIIQ13045 1269 aa28■■■□□ 2.07
EPCAM-202ENST00000405271 PDIA6Q15084 440 aa28■■■□□ 2.07
EPCAM-202ENST00000405271 API5Q9BZZ5 524 aaKnown RBP28■■■□□ 2.07
EPCAM-202ENST00000405271 ATF5Q9Y2D1 282 aaPredicted RBP28■■■□□ 2.07
EPCAM-202ENST00000405271 CASZ1Q86V15 1759 aa27.99■■■□□ 2.07
EPCAM-202ENST00000405271 CYP19A1P11511 503 aaPredicted RBP27.99■■■□□ 2.07
EPCAM-202ENST00000405271 TRIM27P14373 513 aa27.99■■■□□ 2.07
EPCAM-202ENST00000405271 HMGB2P26583 209 aaKnown RBP27.98■■■□□ 2.07
EPCAM-202ENST00000405271 G2E3Q7L622 706 aa27.98■■■□□ 2.07
EPCAM-202ENST00000405271 MTFR1LQ9H019 292 aa27.98■■■□□ 2.07
EPCAM-202ENST00000405271 UBR3Q6ZT12 1888 aa27.98■■■□□ 2.07
EPCAM-202ENST00000405271 BCORQ6W2J9 1755 aa27.98■■■□□ 2.07
EPCAM-202ENST00000405271 ITPK1Q13572 414 aa27.97■■■□□ 2.07
EPCAM-202ENST00000405271 PROSER3Q2NL68 480 aa27.97■■■□□ 2.07
EPCAM-202ENST00000405271 PNPLA7Q6ZV29 1317 aa27.97■■■□□ 2.07
EPCAM-202ENST00000405271 NUP98P52948 1817 aa27.97■■■□□ 2.07
EPCAM-202ENST00000405271 ANXA1P04083 346 aa27.96■■■□□ 2.07
EPCAM-202ENST00000405271 PTGER2P43116 358 aa27.96■■■□□ 2.07
EPCAM-202ENST00000405271 FTSJ3Q8IY81 847 aaKnown RBP27.96■■■□□ 2.07
EPCAM-202ENST00000405271 NBPF26B4DH59 902 aa27.95■■■□□ 2.06
EPCAM-202ENST00000405271 A1BGP04217 495 aa27.95■■■□□ 2.06
EPCAM-202ENST00000405271 FKBP5Q13451 457 aaPredicted RBP27.95■■■□□ 2.06
EPCAM-202ENST00000405271 NBPF10Q6P3W6 841 aaKnown RBP27.95■■■□□ 2.06
EPCAM-202ENST00000405271 LRP10Q7Z4F1 713 aa27.95■■■□□ 2.06
EPCAM-202ENST00000405271 DZIP1LQ8IYY4 767 aaKnown RBP27.95■■■□□ 2.06
EPCAM-202ENST00000405271 NBPF15Q8N660 670 aa27.95■■■□□ 2.06
EPCAM-202ENST00000405271 PHAXQ9H814 394 aaKnown RBP27.95■■■□□ 2.06
EPCAM-202ENST00000405271 ABCC4O15439 1325 aa27.95■■■□□ 2.06
EPCAM-202ENST00000405271 MYL6BP14649 208 aa27.94■■■□□ 2.06
EPCAM-202ENST00000405271 C4AP0C0L4 1744 aa27.94■■■□□ 2.06
EPCAM-202ENST00000405271 PPP1R1BQ9UD71 204 aaPredicted RBP27.93■■■□□ 2.06
EPCAM-202ENST00000405271 CNTNAP4Q9C0A0 1308 aa27.93■■■□□ 2.06
EPCAM-202ENST00000405271 C20orf194Q5TEA3 1177 aa27.92■■■□□ 2.06
EPCAM-202ENST00000405271 SLC16A10Q8TF71 515 aa27.92■■■□□ 2.06
EPCAM-202ENST00000405271 CCDC87Q9NVE4 849 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms