RNA–Protein interactions for RNA: ENST00000401408.5

CLHC1-201, Transcript of clathrin heavy chain linker domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLHC1, Length 2,248 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1-201ENST00000401408 CNGB1Q14028 1251 aaPredicted RBP4.99□□□□□ -1.61
CLHC1-201ENST00000401408 PLEKHG6Q3KR16 790 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 ZKSCAN2Q63HK3 967 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.99□□□□□ -1.61
CLHC1-201ENST00000401408 TRIM34Q9BYJ4 488 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 PIF1Q9H611 641 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 BSDC1Q9NW68 430 aaPredicted RBP4.99□□□□□ -1.61
CLHC1-201ENST00000401408 COL4A3BPQ9Y5P4 624 aa4.99□□□□□ -1.61
CLHC1-201ENST00000401408 WASHC2CQ9Y4E1 1318 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 MSH6P52701 1360 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 EIF2AK4Q9P2K8 1649 aaKnown RBP4.98□□□□□ -1.61
CLHC1-201ENST00000401408 CEP152O94986 1710 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 ANKRD33BA6NCL7 494 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 KIF3BO15066 747 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 SOX12O15370 315 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 DHX16O60231 1041 aaKnown RBP4.98□□□□□ -1.61
CLHC1-201ENST00000401408 C9orf131Q5VYM1 1079 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 ZNF467Q7Z7K2 595 aaPredicted RBP4.98□□□□□ -1.61
CLHC1-201ENST00000401408 TSPAN18Q96SJ8 248 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 IRF2BPLQ9H1B7 796 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 QTRT2Q9H974 415 aaKnown RBP4.98□□□□□ -1.61
CLHC1-201ENST00000401408 IQSEC3Q9UPP2 1182 aaPredicted RBP4.98□□□□□ -1.61
CLHC1-201ENST00000401408 NUB1Q9Y5A7 615 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 SPHKAPQ2M3C7 1700 aa4.98□□□□□ -1.61
CLHC1-201ENST00000401408 GOLIM4O00461 696 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 GTF2F1P35269 517 aaKnown RBP eCLIP4.97□□□□□ -1.61
CLHC1-201ENST00000401408 LSM11P83369 360 aaKnown RBP eCLIP4.97□□□□□ -1.61
CLHC1-201ENST00000401408 CSPP1Q1MSJ5 1256 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 HDGFL1Q5TGJ6 251 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 PIK3R5Q8WYR1 880 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 BRINP2Q9C0B6 783 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 TPX2Q9ULW0 747 aaKnown RBP4.97□□□□□ -1.61
CLHC1-201ENST00000401408 RPGRIP1LQ68CZ1 1315 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 CFAP69A5D8W1 941 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 ATRNO75882 1429 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 S100BP04271 92 aaPredicted RBP4.97□□□□□ -1.61
CLHC1-201ENST00000401408 GTF2E1P29083 439 aaPredicted RBP4.97□□□□□ -1.61
CLHC1-201ENST00000401408 EVA1CP58658 441 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 TAGLNQ01995 201 aaKnown RBP4.97□□□□□ -1.61
CLHC1-201ENST00000401408 RNF187Q5TA31 235 aaPredicted RBP4.97□□□□□ -1.61
CLHC1-201ENST00000401408 FMNL3Q8IVF7 1028 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 LARP6Q9BRS8 491 aaKnown RBP4.97□□□□□ -1.61
CLHC1-201ENST00000401408 SPC25Q9HBM1 224 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 PRKAG2Q9UGJ0 569 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 NRBP1Q9UHY1 535 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 SH3BP1Q9Y3L3 701 aa4.97□□□□□ -1.61
CLHC1-201ENST00000401408 GOLGA6CA6NDK9 693 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 GOLGA6BA6NDN3 693 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 GOLGA6DP0CG33 693 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 NUBP1P53384 320 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 XPCQ01831 940 aaPredicted RBP4.96□□□□□ -1.62
CLHC1-201ENST00000401408 BANK1Q8NDB2 785 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 ZSWIM4Q9H7M6 989 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 POLR3EQ9NVU0 708 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 GOLGA6AQ9NYA3 693 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 BRWD3Q6RI45 1802 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 UNC13BO14795 1591 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 ZNF644Q9H582 1327 aaPredicted RBP4.96□□□□□ -1.62
CLHC1-201ENST00000401408 A0A0G2JS52 829 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 HSP90AA1P07900 732 aaKnown RBP4.96□□□□□ -1.62
CLHC1-201ENST00000401408 ATP2B1P20020 1258 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 MMP14P50281 582 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 MEX3CQ5U5Q3 659 aaKnown RBP4.96□□□□□ -1.62
CLHC1-201ENST00000401408 PMFBP1Q8TBY8 1022 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 ADAMTS19Q8TE59 1207 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 PPP1R12CQ9BZL4 782 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 PCDH12Q9NPG4 1184 aa4.96□□□□□ -1.62
CLHC1-201ENST00000401408 MAP3K20Q9NYL2 800 aaKnown RBP4.96□□□□□ -1.62
CLHC1-201ENST00000401408 EFCAB6Q5THR3 1501 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 ASXL1Q8IXJ9 1541 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 FYCO1Q9BQS8 1478 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 NUTM2BA6NNL0 878 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 NUTM2EB1AL46 878 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 LMOD1P29536 600 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 NBPF20Q3BBV1 942 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 NUTM2DQ5VT03 806 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 ZNF787Q6DD87 383 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 NUTM2AQ8IVF1 878 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 HELBQ8NG08 1087 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 ARHGEF5Q12774 1597 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 CCDC141Q6ZP82 1450 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 BLMP54132 1417 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 MARF1Q9Y4F3 1742 aaKnown RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 PNPLA6Q8IY17 1366 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 COL22A1Q8NFW1 1626 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 PRC1O43663 620 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 PPP1R37O75864 691 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 HDLBPQ00341 1268 aaKnown RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 BMS1Q14692 1282 aaKnown RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 BRINP3Q76B58 766 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 TMC2Q8TDI7 906 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 NGLY1Q96IV0 654 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 REPIN1Q9BWE0 567 aaKnown RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 CFDP1Q9UEE9 299 aaPredicted RBP4.95□□□□□ -1.62
CLHC1-201ENST00000401408 TCEAL9Q9UHQ7 104 aa4.95□□□□□ -1.62
CLHC1-201ENST00000401408 ZFYVE9O95405 1425 aa4.94□□□□□ -1.62
CLHC1-201ENST00000401408 DCCP43146 1447 aa4.94□□□□□ -1.62
CLHC1-201ENST00000401408 GOLGB1Q14789 3259 aaKnown RBP4.94□□□□□ -1.62
CLHC1-201ENST00000401408 ATG7O95352 703 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms