RNA–Protein interactions for RNA: ENST00000401004.2

HIST2H3DP1-201, Transcript of histone cluster 2 H3 family member d pseudogene 1, humanhuman

BASIC

Gene HIST2H3DP1, Length 416 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H3DP1-201ENST00000401004 COL15A1P39059 1388 aa23.17■■□□□ 1.3
HIST2H3DP1-201ENST00000401004 CANXP27824 592 aaKnown RBP23.17■■□□□ 1.3
HIST2H3DP1-201ENST00000401004 DCTN1Q14203 1278 aa23.17■■□□□ 1.3
HIST2H3DP1-201ENST00000401004 PLEKHF1Q96S99 279 aa23.17■■□□□ 1.3
HIST2H3DP1-201ENST00000401004 NPM2Q86SE8 214 aaKnown RBP23.16■■□□□ 1.3
HIST2H3DP1-201ENST00000401004 NFE2L2Q16236 605 aa23.15■■□□□ 1.3
HIST2H3DP1-201ENST00000401004 A0A087WZG4 1122 aa23.14■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 FKBP8Q14318 412 aa23.14■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 USPL1Q5W0Q7 1092 aa23.14■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 NARFQ9UHQ1 456 aa23.14■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 KCNQ3O43525 872 aa23.13■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 YBX3P16989 372 aaKnown RBP eCLIP23.13■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 TAF7Q15545 349 aaPredicted RBP23.13■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 ZNF330Q9Y3S2 320 aaPredicted RBP23.13■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 CHD4Q14839 1912 aa23.12■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 WDR43Q15061 677 aaKnown RBP eCLIP23.12■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 PNISRQ8TF01 805 aaKnown RBP23.12■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 C10orf71Q711Q0 1435 aa23.11■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 TGFB2P61812 414 aa23.11■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 UTRNP46939 3433 aa23.11■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 SNRPA1P09661 255 aaKnown RBP23.1■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 EIF5P55010 431 aaKnown RBP23.1■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 IL6STP40189 918 aaPredicted RBP23.09■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 PRKRIP1Q9H875 184 aaPredicted RBP23.09■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 DLG5Q8TDM6 1919 aa23.09■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 WWC3Q9ULE0 1092 aa23.08■■□□□ 1.29
HIST2H3DP1-201ENST00000401004 KIF13BQ9NQT8 1826 aa23.08■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 PXDNLA1KZ92 1463 aa23.07■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 DDR1Q08345 913 aa23.07■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 LMOD3Q0VAK6 560 aa23.07■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 POLRMTO00411 1230 aaKnown RBP23.06■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 A1BGP04217 495 aa23.06■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 TM4SF1P30408 202 aa23.06■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 RIPK4P57078 832 aa23.06■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 MIS18AQ9NYP9 233 aa23.06■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 USP16Q9Y5T5 823 aa23.06■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 GOLGB1Q14789 3259 aaKnown RBP23.06■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 A0A0G2JLW4 131 aa23.05■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 NFIXQ14938 502 aa23.04■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 THUMPD2Q9BTF0 503 aaKnown RBP23.04■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 TBC1D2BQ9UPU7 963 aa23.04■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 PRAMEF22A3QJZ6 481 aa23.03■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 DPEP1P16444 411 aa23.03■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 ZNF784Q8NCA9 323 aaPredicted RBP23.03■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 BCL2L12Q9HB09 334 aa23.03■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 TMPOP42166 694 aaKnown RBP23.02■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 BICDL1Q6ZP65 573 aa23.02■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 CCDC146Q8IYE0 955 aa23.02■■□□□ 1.28
HIST2H3DP1-201ENST00000401004 N4BP2Q86UW6 1770 aaPredicted RBP23.01■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 DZIP3Q86Y13 1208 aaKnown RBP23.01■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 RUNDC1Q96C34 613 aa23.01■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 BCS1LQ9Y276 419 aa23.01■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 SERPINB2P05120 415 aa23■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 SCN7AQ01118 1682 aa23■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 KIAA1551Q9HCM1 1747 aa22.99■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 KDM3BQ7LBC6 1761 aa22.99■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 PIP4K2AP48426 406 aaPredicted RBP22.99■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 NEUROD2Q15784 382 aa22.99■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 PIM2Q9P1W9 311 aa22.99■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 TSPYL4Q9UJ04 414 aa22.99■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 ADAMTS8Q9UP79 889 aa22.99■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 ZNF316A6NFI3 1004 aaPredicted RBP22.98■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 RRP7AQ9Y3A4 280 aaKnown RBP22.98■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 NPHP1O15259 732 aa22.97■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 GIGYF1O75420 1035 aaPredicted RBP22.97■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 EIF4A1P60842 406 aaKnown RBP22.97■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 TBC1D9BQ66K14 1250 aa22.97■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 ZNF652Q9Y2D9 606 aa22.97■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 LAMB4A4D0S4 1761 aa22.96■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 CAMTA2O94983 1202 aa22.96■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 SETDB2Q96T68 719 aa22.96■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 BABAM1Q9NWV8 329 aa22.96■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 CARMIL3Q8ND23 1372 aa22.96■■□□□ 1.27
HIST2H3DP1-201ENST00000401004 DALRD3Q5D0E6 543 aaKnown RBP22.95■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 AFDNP55196 1824 aaKnown RBP22.94■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 CHRNA5P30532 468 aa22.94■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 NRXN2Q9P2S2 1712 aa22.94■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 NBPF26B4DH59 902 aa22.93■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 KCNA3P22001 575 aa22.93■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 NBPF10Q6P3W6 841 aaKnown RBP22.93■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 CLEC4GQ6UXB4 293 aa22.93■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 NBPF15Q8N660 670 aa22.93■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 BCORQ6W2J9 1755 aa22.92■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 ARHGAP27Q6ZUM4 889 aa22.92■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 RGL2O15211 777 aa22.91■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 CNBD1Q8NA66 436 aa22.91■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 BRCA1P38398 1863 aaKnown RBP22.91■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 H0YIN7 160 aa22.9■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 ST5P78524 1137 aa22.9■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 C2CD5Q86YS7 1000 aa22.9■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 PDZRN3Q9UPQ7 1066 aa22.9■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 LAS1LQ9Y4W2 734 aaKnown RBP22.9■■□□□ 1.26
HIST2H3DP1-201ENST00000401004 ANP32CO43423 234 aa22.89■■□□□ 1.25
HIST2H3DP1-201ENST00000401004 PDE6BP35913 854 aa22.89■■□□□ 1.25
HIST2H3DP1-201ENST00000401004 NGEFQ8N5V2 710 aa22.89■■□□□ 1.25
HIST2H3DP1-201ENST00000401004 ERBB4Q15303 1308 aa22.88■■□□□ 1.25
HIST2H3DP1-201ENST00000401004 MYL6BP14649 208 aa22.88■■□□□ 1.25
HIST2H3DP1-201ENST00000401004 PRR5LQ6MZQ0 368 aa22.88■■□□□ 1.25
HIST2H3DP1-201ENST00000401004 KIF6Q6ZMV9 814 aa22.88■■□□□ 1.25
HIST2H3DP1-201ENST00000401004 NBPF5PQ86XG9 351 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms