RNA–Protein interactions for RNA: ENST00000399982.6

CHD8-201, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD8, Length 8,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-201ENST00000399982 PNISRQ8TF01 805 aaKnown RBP9.66□□□□□ -0.86
CHD8-201ENST00000399982 FEZ2Q9UHY8 353 aaPredicted RBP9.66□□□□□ -0.86
CHD8-201ENST00000399982 GNAI2P04899 355 aa9.66□□□□□ -0.86
CHD8-201ENST00000399982 YEATS4O95619 227 aa9.66□□□□□ -0.86
CHD8-201ENST00000399982 FOXD1Q16676 465 aa9.66□□□□□ -0.86
CHD8-201ENST00000399982 MYCBPQ99417 103 aaPredicted RBP9.66□□□□□ -0.86
CHD8-201ENST00000399982 TCHPQ9BT92 498 aa9.66□□□□□ -0.86
CHD8-201ENST00000399982 BMP2KQ9NSY1 1161 aaPredicted RBP9.66□□□□□ -0.86
CHD8-201ENST00000399982 CEP83Q9Y592 693 aa9.66□□□□□ -0.86
CHD8-201ENST00000399982 HMGB1P1B2RPK0 211 aaPredicted RBP9.66□□□□□ -0.86
CHD8-201ENST00000399982 USP5P45974 858 aa9.66□□□□□ -0.86
CHD8-201ENST00000399982 FSD1Q9BTV5 496 aa9.66□□□□□ -0.86
CHD8-201ENST00000399982 CCDC69A6NI79 296 aa9.65□□□□□ -0.86
CHD8-201ENST00000399982 BLOC1S2Q6QNY1 142 aa9.65□□□□□ -0.86
CHD8-201ENST00000399982 OTUD6BQ8N6M0 293 aa9.65□□□□□ -0.86
CHD8-201ENST00000399982 ODF2LQ9ULJ1 636 aa9.65□□□□□ -0.86
CHD8-201ENST00000399982 ADCY5O95622 1261 aa9.65□□□□□ -0.86
CHD8-201ENST00000399982 TNPO1Q92973 898 aaKnown RBP9.65□□□□□ -0.86
CHD8-201ENST00000399982 ZFYP08048 801 aaPredicted RBP9.65□□□□□ -0.86
CHD8-201ENST00000399982 TTC39AQ5SRH9 613 aa9.65□□□□□ -0.86
CHD8-201ENST00000399982 NUP133Q8WUM0 1156 aa9.65□□□□□ -0.86
CHD8-201ENST00000399982 IFI16Q16666 785 aaKnown RBP9.65□□□□□ -0.86
CHD8-201ENST00000399982 ATF7IPQ6VMQ6 1270 aa9.65□□□□□ -0.86
CHD8-201ENST00000399982 SPATS2Q86XZ4 545 aaKnown RBP9.65□□□□□ -0.86
CHD8-201ENST00000399982 C16orf45Q96MC5 204 aaPredicted RBP9.65□□□□□ -0.86
CHD8-201ENST00000399982 CCDC121Q6ZUS5 278 aa9.65□□□□□ -0.87
CHD8-201ENST00000399982 RNF168Q8IYW5 571 aaPredicted RBP9.65□□□□□ -0.87
CHD8-201ENST00000399982 CCDC38Q502W7 563 aa9.65□□□□□ -0.87
CHD8-201ENST00000399982 TRERF1Q96PN7 1200 aa9.65□□□□□ -0.87
CHD8-201ENST00000399982 ARHGAP25P42331 645 aa9.64□□□□□ -0.87
CHD8-201ENST00000399982 STK3Q13188 491 aa9.64□□□□□ -0.87
CHD8-201ENST00000399982 FKBP15Q5T1M5 1219 aa9.64□□□□□ -0.87
CHD8-201ENST00000399982 UTP14CQ5TAP6 766 aaKnown RBP9.64□□□□□ -0.87
CHD8-201ENST00000399982 CCDC30Q5VVM6 783 aa9.64□□□□□ -0.87
CHD8-201ENST00000399982 KANK3Q6NY19 840 aa9.64□□□□□ -0.87
CHD8-201ENST00000399982 KIF6Q6ZMV9 814 aa9.64□□□□□ -0.87
CHD8-201ENST00000399982 RAI14Q9P0K7 980 aa9.64□□□□□ -0.87
CHD8-201ENST00000399982 CAPN2P17655 700 aa9.64□□□□□ -0.87
CHD8-201ENST00000399982 MAP7D1Q3KQU3 841 aa9.64□□□□□ -0.87
CHD8-201ENST00000399982 PDRG1Q9NUG6 133 aa9.64□□□□□ -0.87
CHD8-201ENST00000399982 NDC80O14777 642 aa9.64□□□□□ -0.87
CHD8-201ENST00000399982 FBF1Q8TES7 1133 aa9.64□□□□□ -0.87
CHD8-201ENST00000399982 KAT6BQ8WYB5 2073 aa9.64□□□□□ -0.87
CHD8-201ENST00000399982 XRCC6P12956 609 aaKnown RBP eCLIP9.63□□□□□ -0.87
CHD8-201ENST00000399982 SPECC1Q5M775 1068 aa9.63□□□□□ -0.87
CHD8-201ENST00000399982 SREK1Q8WXA9 508 aaKnown RBP9.63□□□□□ -0.87
CHD8-201ENST00000399982 ANAPC4Q9UJX5 808 aa9.63□□□□□ -0.87
CHD8-201ENST00000399982 FSD2A1L4K1 749 aa9.63□□□□□ -0.87
CHD8-201ENST00000399982 PPP1R12BO60237 982 aaPredicted RBP9.63□□□□□ -0.87
CHD8-201ENST00000399982 ZSCAN25Q6NSZ9 544 aa9.63□□□□□ -0.87
CHD8-201ENST00000399982 SEPT8Q92599 483 aa9.63□□□□□ -0.87
CHD8-201ENST00000399982 GOLGA1Q92805 767 aa9.63□□□□□ -0.87
CHD8-201ENST00000399982 SNX21Q969T3 373 aa9.63□□□□□ -0.87
CHD8-201ENST00000399982 ZFP91Q96JP5 570 aaPredicted RBP9.63□□□□□ -0.87
CHD8-201ENST00000399982 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP9.63□□□□□ -0.873e-6■□□□□ 9.1
CHD8-201ENST00000399982 FGD6Q6ZV73 1430 aa9.63□□□□□ -0.87
CHD8-201ENST00000399982 ZNF622Q969S3 477 aaKnown RBP eCLIP9.63□□□□□ -0.876e-7■■■□□ 15.3
CHD8-201ENST00000399982 CCDC6Q16204 474 aa9.63□□□□□ -0.87
CHD8-201ENST00000399982 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.63□□□□□ -0.873e-6■■■■■ 26.9
CHD8-201ENST00000399982 IFT74Q96LB3 600 aa9.63□□□□□ -0.87
CHD8-201ENST00000399982 UBA5Q9GZZ9 404 aa9.63□□□□□ -0.87
CHD8-201ENST00000399982 LUC7L2Q9Y383 392 aaKnown RBP9.63□□□□□ -0.87
CHD8-201ENST00000399982 HFM1A2PYH4 1435 aa9.63□□□□□ -0.87
CHD8-201ENST00000399982 CCDC96Q2M329 555 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 LMNTD2Q8IXW0 634 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 BANK1Q8NDB2 785 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 PRPF31Q8WWY3 499 aaKnown RBP9.62□□□□□ -0.87
CHD8-201ENST00000399982 ERO1AQ96HE7 468 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 TBC1D2Q9BYX2 928 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 CTAGE15A4D2H0 777 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 CTAGE8P0CG41 777 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 PSME1Q06323 249 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 CTAGE6Q86UF2 777 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 CTAGE4Q8IX94 777 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 CTAGE1Q96RT6 745 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 CNNM1Q9NRU3 951 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 TNIP1Q15025 636 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 CCDC155Q8N6L0 562 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 FAM200AQ8TCP9 573 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 WHAMMQ8TF30 809 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 TMX1Q9H3N1 280 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 RSPH14Q9UHP6 348 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 A0A1W2PRG0 241 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 CROCCP2Q86T23 111 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 MICALL1Q8N3F8 863 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 TBC1D32Q96NH3 1257 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 ABCC11Q96J66 1382 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 PPFIA3O75145 1194 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 HDXQ7Z353 690 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 USP25Q9UHP3 1055 aa9.62□□□□□ -0.87
CHD8-201ENST00000399982 BAG4O95429 457 aaKnown RBP9.61□□□□□ -0.87
CHD8-201ENST00000399982 ERCC3P19447 782 aa9.61□□□□□ -0.87
CHD8-201ENST00000399982 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.61□□□□□ -0.87
CHD8-201ENST00000399982 IKBKGQ9Y6K9 419 aa9.61□□□□□ -0.87
CHD8-201ENST00000399982 ABCC8Q09428 1581 aa9.61□□□□□ -0.87
CHD8-201ENST00000399982 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.61□□□□□ -0.87
CHD8-201ENST00000399982 ATP2C2O75185 946 aa9.61□□□□□ -0.87
CHD8-201ENST00000399982 FERMT1Q9BQL6 677 aa9.61□□□□□ -0.87
CHD8-201ENST00000399982 NAA25Q14CX7 972 aa9.61□□□□□ -0.87
CHD8-201ENST00000399982 ADAMTS8Q9UP79 889 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms