RNA–Protein interactions for RNA: ENST00000399295.2

SMIM11A-202, Transcript of small integral membrane protein 11A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMIM11A, Length 1,074 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-202ENST00000399295 ADRA2BP18089 450 aa22.9■■□□□ 1.26
SMIM11A-202ENST00000399295 POLD1P28340 1107 aa22.9■■□□□ 1.26
SMIM11A-202ENST00000399295 TRIM35Q9UPQ4 493 aa22.9■■□□□ 1.26
SMIM11A-202ENST00000399295 ARHGEF1Q92888 912 aaKnown RBP22.89■■□□□ 1.25
SMIM11A-202ENST00000399295 SNRPA1P09661 255 aaKnown RBP22.88■■□□□ 1.25
SMIM11A-202ENST00000399295 RFC4P35249 363 aa22.88■■□□□ 1.25
SMIM11A-202ENST00000399295 MSL1Q68DK7 614 aa22.88■■□□□ 1.25
SMIM11A-202ENST00000399295 YTHDC1Q96MU7 727 aaKnown RBP22.88■■□□□ 1.25
SMIM11A-202ENST00000399295 COL24A1Q17RW2 1714 aa22.88■■□□□ 1.25
SMIM11A-202ENST00000399295 ZBTB1Q9Y2K1 713 aa22.87■■□□□ 1.25
SMIM11A-202ENST00000399295 ARXQ96QS3 562 aa22.86■■□□□ 1.25
SMIM11A-202ENST00000399295 TSPYL4Q9UJ04 414 aa22.86■■□□□ 1.25
SMIM11A-202ENST00000399295 MYH14Q7Z406 1995 aaKnown RBP22.86■■□□□ 1.25
SMIM11A-202ENST00000399295 CANXP27824 592 aaKnown RBP22.85■■□□□ 1.25
SMIM11A-202ENST00000399295 BABAM1Q9NWV8 329 aa22.85■■□□□ 1.25
SMIM11A-202ENST00000399295 SOS1Q07889 1333 aaPredicted RBP22.84■■□□□ 1.25
SMIM11A-202ENST00000399295 PRAMEF22A3QJZ6 481 aa22.84■■□□□ 1.25
SMIM11A-202ENST00000399295 DCAF8L1A6NGE4 600 aa22.84■■□□□ 1.25
SMIM11A-202ENST00000399295 CENPBP07199 599 aaPredicted RBP22.84■■□□□ 1.25
SMIM11A-202ENST00000399295 EIF4A1P60842 406 aaKnown RBP22.84■■□□□ 1.25
SMIM11A-202ENST00000399295 USP16Q9Y5T5 823 aa22.84■■□□□ 1.25
SMIM11A-202ENST00000399295 FAM9BQ8IZU0 186 aa22.83■■□□□ 1.25
SMIM11A-202ENST00000399295 A1BGP04217 495 aa22.81■■□□□ 1.24
SMIM11A-202ENST00000399295 NLGN1Q8N2Q7 840 aa22.81■■□□□ 1.24
SMIM11A-202ENST00000399295 LAS1LQ9Y4W2 734 aaKnown RBP22.81■■□□□ 1.24
SMIM11A-202ENST00000399295 CHL1O00533 1208 aa22.8■■□□□ 1.24
SMIM11A-202ENST00000399295 GIGYF1O75420 1035 aaPredicted RBP22.8■■□□□ 1.24
SMIM11A-202ENST00000399295 EIF5P55010 431 aaKnown RBP22.8■■□□□ 1.24
SMIM11A-202ENST00000399295 FHDC1Q9C0D6 1143 aaPredicted RBP22.8■■□□□ 1.24
SMIM11A-202ENST00000399295 SRP68Q9UHB9 627 aaKnown RBP22.8■■□□□ 1.24
SMIM11A-202ENST00000399295 USP42Q9H9J4 1324 aaKnown RBP22.8■■□□□ 1.24
SMIM11A-202ENST00000399295 COL15A1P39059 1388 aa22.79■■□□□ 1.24
SMIM11A-202ENST00000399295 SENP3-EIF4A1A0A087X0R7 540 aa22.79■■□□□ 1.24
SMIM11A-202ENST00000399295 ZPR1O75312 459 aa22.79■■□□□ 1.24
SMIM11A-202ENST00000399295 GYS1P13807 737 aa22.79■■□□□ 1.24
SMIM11A-202ENST00000399295 IL6STP40189 918 aaPredicted RBP22.79■■□□□ 1.24
SMIM11A-202ENST00000399295 CALD1Q05682 793 aaKnown RBP22.79■■□□□ 1.24
SMIM11A-202ENST00000399295 KDM3BQ7LBC6 1761 aa22.78■■□□□ 1.24
SMIM11A-202ENST00000399295 SYT17Q9BSW7 474 aa22.78■■□□□ 1.24
SMIM11A-202ENST00000399295 ZNF330Q9Y3S2 320 aaPredicted RBP22.78■■□□□ 1.24
SMIM11A-202ENST00000399295 A0A087WZG4 1122 aa22.77■■□□□ 1.24
SMIM11A-202ENST00000399295 NPM2Q86SE8 214 aaKnown RBP22.77■■□□□ 1.24
SMIM11A-202ENST00000399295 CFAP44Q96MT7 982 aa22.77■■□□□ 1.24
SMIM11A-202ENST00000399295 NARFQ9UHQ1 456 aa22.77■■□□□ 1.24
SMIM11A-202ENST00000399295 MMP10P09238 476 aa22.76■■□□□ 1.23
SMIM11A-202ENST00000399295 KLHL34Q8N239 644 aa22.76■■□□□ 1.23
SMIM11A-202ENST00000399295 PIP4K2AP48426 406 aaPredicted RBP22.75■■□□□ 1.23
SMIM11A-202ENST00000399295 CCDC27Q2M243 656 aa22.75■■□□□ 1.23
SMIM11A-202ENST00000399295 USPL1Q5W0Q7 1092 aa22.75■■□□□ 1.23
SMIM11A-202ENST00000399295 FKBP8Q14318 412 aa22.74■■□□□ 1.23
SMIM11A-202ENST00000399295 NCBP3Q53F19 620 aaKnown RBP22.74■■□□□ 1.23
SMIM11A-202ENST00000399295 IFT57Q9NWB7 429 aa22.74■■□□□ 1.23
SMIM11A-202ENST00000399295 NBPF26B4DH59 902 aa22.73■■□□□ 1.23
SMIM11A-202ENST00000399295 ZNF853P0CG23 659 aa22.73■■□□□ 1.23
SMIM11A-202ENST00000399295 GNAI1P63096 354 aa22.73■■□□□ 1.23
SMIM11A-202ENST00000399295 NBPF10Q6P3W6 841 aaKnown RBP22.73■■□□□ 1.23
SMIM11A-202ENST00000399295 WWC1Q8IX03 1113 aa22.73■■□□□ 1.23
SMIM11A-202ENST00000399295 NBPF15Q8N660 670 aa22.73■■□□□ 1.23
SMIM11A-202ENST00000399295 TBC1D2BQ9UPU7 963 aa22.73■■□□□ 1.23
SMIM11A-202ENST00000399295 C4AP0C0L4 1744 aa22.73■■□□□ 1.23
SMIM11A-202ENST00000399295 MBIPQ9NS73 344 aa22.72■■□□□ 1.23
SMIM11A-202ENST00000399295 CD2APQ9Y5K6 639 aa22.72■■□□□ 1.23
SMIM11A-202ENST00000399295 SALL2Q9Y467 1007 aaPredicted RBP22.71■■□□□ 1.23
SMIM11A-202ENST00000399295 EIF2S2P20042 333 aaKnown RBP22.7■■□□□ 1.22
SMIM11A-202ENST00000399295 KRT24Q2M2I5 525 aa22.7■■□□□ 1.22
SMIM11A-202ENST00000399295 BCL2L12Q9HB09 334 aa22.7■■□□□ 1.22
SMIM11A-202ENST00000399295 PARP3Q9Y6F1 533 aa22.7■■□□□ 1.22
SMIM11A-202ENST00000399295 DZIP3Q86Y13 1208 aaKnown RBP22.69■■□□□ 1.22
SMIM11A-202ENST00000399295 HNRNPUQ00839 825 aaKnown RBP eCLIP22.68■■□□□ 1.22
SMIM11A-202ENST00000399295 ERBB4Q15303 1308 aa22.67■■□□□ 1.22
SMIM11A-202ENST00000399295 CAMTA2O94983 1202 aa22.67■■□□□ 1.22
SMIM11A-202ENST00000399295 TM4SF1P30408 202 aa22.67■■□□□ 1.22
SMIM11A-202ENST00000399295 LAMB4A4D0S4 1761 aa22.66■■□□□ 1.22
SMIM11A-202ENST00000399295 MYL6BP14649 208 aa22.66■■□□□ 1.22
SMIM11A-202ENST00000399295 DDR1Q08345 913 aa22.66■■□□□ 1.22
SMIM11A-202ENST00000399295 NFIXQ14938 502 aa22.66■■□□□ 1.22
SMIM11A-202ENST00000399295 NGEFQ8N5V2 710 aa22.66■■□□□ 1.22
SMIM11A-202ENST00000399295 IL16Q14005 1332 aa22.65■■□□□ 1.22
SMIM11A-202ENST00000399295 HOXB7P09629 217 aa22.65■■□□□ 1.22
SMIM11A-202ENST00000399295 DUSP27Q5VZP5 1158 aa22.65■■□□□ 1.22
SMIM11A-202ENST00000399295 NLGN2Q8NFZ4 835 aa22.65■■□□□ 1.22
SMIM11A-202ENST00000399295 POLRMTO00411 1230 aaKnown RBP22.64■■□□□ 1.21
SMIM11A-202ENST00000399295 WDR63Q8IWG1 891 aa22.64■■□□□ 1.21
SMIM11A-202ENST00000399295 NECTIN2Q92692 538 aa22.64■■□□□ 1.21
SMIM11A-202ENST00000399295 BICDL1Q6ZP65 573 aa22.63■■□□□ 1.21
SMIM11A-202ENST00000399295 PDIA6Q15084 440 aa22.62■■□□□ 1.21
SMIM11A-202ENST00000399295 HDGFL1Q5TGJ6 251 aa22.62■■□□□ 1.21
SMIM11A-202ENST00000399295 TBC1D9BQ66K14 1250 aa22.62■■□□□ 1.21
SMIM11A-202ENST00000399295 TSR2Q969E8 191 aaKnown RBP22.62■■□□□ 1.21
SMIM11A-202ENST00000399295 ZNF652Q9Y2D9 606 aa22.62■■□□□ 1.21
SMIM11A-202ENST00000399295 ELL2O00472 640 aaPredicted RBP22.61■■□□□ 1.21
SMIM11A-202ENST00000399295 CLEC4GQ6UXB4 293 aa22.61■■□□□ 1.21
SMIM11A-202ENST00000399295 ZBED9Q6R2W3 1325 aa22.6■■□□□ 1.21
SMIM11A-202ENST00000399295 RGL2O15211 777 aa22.6■■□□□ 1.21
SMIM11A-202ENST00000399295 SERPINB2P05120 415 aa22.6■■□□□ 1.21
SMIM11A-202ENST00000399295 PROSER3Q2NL68 480 aa22.6■■□□□ 1.21
SMIM11A-202ENST00000399295 KIF6Q6ZMV9 814 aa22.6■■□□□ 1.21
SMIM11A-202ENST00000399295 TTLL7Q6ZT98 887 aa22.6■■□□□ 1.21
SMIM11A-202ENST00000399295 C8orf58Q8NAV2 365 aa22.6■■□□□ 1.21
SMIM11A-202ENST00000399295 ANXA1P04083 346 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms