RNA–Protein interactions for RNA: ENST00000399256.4

APOB-202, Transcript of apolipoprotein B, humanhuman

TSL 1 (best) BASIC

Gene APOB, Length 3,128 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-202ENST00000399256 CBX1P83916 185 aa16.84■□□□□ 0.29
APOB-202ENST00000399256 SSH2Q76I76 1423 aa16.84■□□□□ 0.29
APOB-202ENST00000399256 NECTIN2Q92692 538 aa16.84■□□□□ 0.29
APOB-202ENST00000399256 IL1RAPL2Q9NP60 686 aa16.84■□□□□ 0.29
APOB-202ENST00000399256 SOX12O15370 315 aa16.83■□□□□ 0.29
APOB-202ENST00000399256 TMEM87AQ8NBN3 555 aa16.83■□□□□ 0.29
APOB-202ENST00000399256 CRB1P82279 1406 aa16.83■□□□□ 0.29
APOB-202ENST00000399256 ZSCAN22P10073 491 aaPredicted RBP16.83■□□□□ 0.28
APOB-202ENST00000399256 GIMAP6Q6P9H5 292 aa16.83■□□□□ 0.28
APOB-202ENST00000399256 SLC26A8Q96RN1 970 aa16.83■□□□□ 0.28
APOB-202ENST00000399256 TUBGCP6Q96RT7 1819 aa16.83■□□□□ 0.28
APOB-202ENST00000399256 KDM4AO75164 1064 aa16.83■□□□□ 0.28
APOB-202ENST00000399256 HSPA4P34932 840 aa16.83■□□□□ 0.28
APOB-202ENST00000399256 FKBP5Q13451 457 aaPredicted RBP16.83■□□□□ 0.28
APOB-202ENST00000399256 KIF3AQ9Y496 699 aa16.83■□□□□ 0.28
APOB-202ENST00000399256 GTF2F1P35269 517 aaKnown RBP eCLIP16.82■□□□□ 0.281e-25■■■□□ 19
APOB-202ENST00000399256 HSP90AB2PQ58FF8 381 aa16.82■□□□□ 0.28
APOB-202ENST00000399256 NUTM1Q86Y26 1132 aa16.82■□□□□ 0.28
APOB-202ENST00000399256 PTPRUQ92729 1446 aa16.82■□□□□ 0.28
APOB-202ENST00000399256 ATP8B2P98198 1209 aa16.82■□□□□ 0.28
APOB-202ENST00000399256 PPP4R3BQ5MIZ7 849 aa16.82■□□□□ 0.28
APOB-202ENST00000399256 SPTLC3Q9NUV7 552 aa16.82■□□□□ 0.28
APOB-202ENST00000399256 LRRFIP2Q9Y608 721 aaKnown RBP16.82■□□□□ 0.28
APOB-202ENST00000399256 UBE2HP62256 183 aa16.81■□□□□ 0.28
APOB-202ENST00000399256 STAP2Q9UGK3 403 aa16.81■□□□□ 0.28
APOB-202ENST00000399256 AP5Z1O43299 807 aa16.81■□□□□ 0.28
APOB-202ENST00000399256 DMTNQ08495 405 aa16.81■□□□□ 0.28
APOB-202ENST00000399256 BCL2L12Q9HB09 334 aa16.81■□□□□ 0.28
APOB-202ENST00000399256 TBX22Q9Y458 520 aa16.81■□□□□ 0.28
APOB-202ENST00000399256 CCDC61Q9Y6R9 512 aa16.81■□□□□ 0.28
APOB-202ENST00000399256 STX6O43752 255 aa16.81■□□□□ 0.28
APOB-202ENST00000399256 LETM1O95202 739 aaPredicted RBP16.81■□□□□ 0.28
APOB-202ENST00000399256 ZSCAN20P17040 1043 aaPredicted RBP16.81■□□□□ 0.28
APOB-202ENST00000399256 SYT1P21579 422 aa16.81■□□□□ 0.28
APOB-202ENST00000399256 AK2P54819 239 aa16.81■□□□□ 0.28
APOB-202ENST00000399256 SPC24Q8NBT2 197 aa16.81■□□□□ 0.28
APOB-202ENST00000399256 STK31Q9BXU1 1019 aa16.81■□□□□ 0.28
APOB-202ENST00000399256 ATP2B3Q16720 1220 aa16.8■□□□□ 0.28
APOB-202ENST00000399256 PYCARDQ9ULZ3 195 aa16.8■□□□□ 0.28
APOB-202ENST00000399256 PLEKHG5O94827 1062 aa16.8■□□□□ 0.28
APOB-202ENST00000399256 GNAI3P08754 354 aa16.8■□□□□ 0.28
APOB-202ENST00000399256 SIRT1Q96EB6 747 aa16.8■□□□□ 0.28
APOB-202ENST00000399256 IL17RAQ96F46 866 aa16.8■□□□□ 0.28
APOB-202ENST00000399256 ANKLE2Q86XL3 938 aa16.79■□□□□ 0.28
APOB-202ENST00000399256 RTF1Q92541 710 aaKnown RBP16.79■□□□□ 0.28
APOB-202ENST00000399256 SNX14Q9Y5W7 946 aa16.79■□□□□ 0.28
APOB-202ENST00000399256 NRKQ7Z2Y5 1582 aa16.79■□□□□ 0.28
APOB-202ENST00000399256 F13A1P00488 732 aa16.79■□□□□ 0.28
APOB-202ENST00000399256 CPA1P15085 419 aa16.79■□□□□ 0.28
APOB-202ENST00000399256 FLIIQ13045 1269 aa16.79■□□□□ 0.28
APOB-202ENST00000399256 KCNF1Q9H3M0 494 aa16.79■□□□□ 0.28
APOB-202ENST00000399256 ROBO2Q9HCK4 1378 aa16.79■□□□□ 0.28
APOB-202ENST00000399256 SMC3Q9UQE7 1217 aa16.79■□□□□ 0.28
APOB-202ENST00000399256 MTHFSDQ2M296 383 aaKnown RBP16.78■□□□□ 0.28
APOB-202ENST00000399256 RUFY3Q7L099 469 aa16.78■□□□□ 0.28
APOB-202ENST00000399256 RASEFQ8IZ41 740 aa16.78■□□□□ 0.28
APOB-202ENST00000399256 FUCA2Q9BTY2 467 aa16.78■□□□□ 0.28
APOB-202ENST00000399256 MON2Q7Z3U7 1717 aa16.77■□□□□ 0.28
APOB-202ENST00000399256 KDM4FA0A1W2PPD8 638 aa16.77■□□□□ 0.28
APOB-202ENST00000399256 TTC14Q96N46 770 aa16.77■□□□□ 0.28
APOB-202ENST00000399256 XRN1Q8IZH2 1706 aaKnown RBP16.77■□□□□ 0.28
APOB-202ENST00000399256 SPDYE4A6NLX3 237 aa16.77■□□□□ 0.27
APOB-202ENST00000399256 LARGE1O95461 756 aa16.77■□□□□ 0.27
APOB-202ENST00000399256 DNM1Q05193 864 aaKnown RBP16.77■□□□□ 0.27
APOB-202ENST00000399256 KIAA1524Q8TCG1 905 aa16.77■□□□□ 0.27
APOB-202ENST00000399256 RAD50Q92878 1312 aa16.77■□□□□ 0.27
APOB-202ENST00000399256 RIOK3O14730 519 aaKnown RBP16.76■□□□□ 0.27
APOB-202ENST00000399256 LIMCH1Q9UPQ0 1083 aa16.76■□□□□ 0.27
APOB-202ENST00000399256 UTP14CQ5TAP6 766 aaKnown RBP16.76■□□□□ 0.27
APOB-202ENST00000399256 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.76■□□□□ 0.27
APOB-202ENST00000399256 MAP3K19Q56UN5 1328 aa16.76■□□□□ 0.27
APOB-202ENST00000399256 PRR36Q9H6K5 1346 aa16.76■□□□□ 0.27
APOB-202ENST00000399256 NUTM2FA1L443 756 aa16.76■□□□□ 0.27
APOB-202ENST00000399256 SGSM2O43147 1006 aa16.75■□□□□ 0.27
APOB-202ENST00000399256 CCDC83Q8IWF9 413 aa16.75■□□□□ 0.27
APOB-202ENST00000399256 PDCL2Q8N4E4 241 aa16.75■□□□□ 0.27
APOB-202ENST00000399256 SPG7Q9UQ90 795 aa16.75■□□□□ 0.27
APOB-202ENST00000399256 CHAF1AQ13111 956 aaPredicted RBP16.74■□□□□ 0.27
APOB-202ENST00000399256 LSG1Q9H089 658 aaKnown RBP16.74■□□□□ 0.27
APOB-202ENST00000399256 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.74■□□□□ 0.27
APOB-202ENST00000399256 CASTP20810 708 aaKnown RBP16.74■□□□□ 0.27
APOB-202ENST00000399256 GJB2P29033 226 aa16.74■□□□□ 0.27
APOB-202ENST00000399256 CWC27Q6UX04 472 aaKnown RBP16.74■□□□□ 0.27
APOB-202ENST00000399256 AMOTL2Q9Y2J4 779 aa16.74■□□□□ 0.27
APOB-202ENST00000399256 CHMP3Q9Y3E7 222 aa16.74■□□□□ 0.27
APOB-202ENST00000399256 ATP6V1DQ9Y5K8 247 aa16.74■□□□□ 0.27
APOB-202ENST00000399256 AOX1Q06278 1338 aa16.74■□□□□ 0.27
APOB-202ENST00000399256 TTC21BQ7Z4L5 1316 aa16.74■□□□□ 0.27
APOB-202ENST00000399256 SURF6O75683 361 aaKnown RBP16.74■□□□□ 0.27
APOB-202ENST00000399256 UBTFL1P0CB47 393 aaPredicted RBP16.74■□□□□ 0.27
APOB-202ENST00000399256 SOS1Q07889 1333 aaPredicted RBP16.73■□□□□ 0.27
APOB-202ENST00000399256 PI4K2BQ8TCG2 481 aa16.73■□□□□ 0.27
APOB-202ENST00000399256 USP44Q9H0E7 712 aa16.73■□□□□ 0.27
APOB-202ENST00000399256 DIAPH3Q9NSV4 1193 aa16.73■□□□□ 0.27
APOB-202ENST00000399256 VPS37CA5D8V6 355 aaPredicted RBP16.73■□□□□ 0.27
APOB-202ENST00000399256 NPHP4O75161 1426 aaPredicted RBP16.73■□□□□ 0.27
APOB-202ENST00000399256 CCDC30Q5VVM6 783 aa16.72■□□□□ 0.27
APOB-202ENST00000399256 MTMR6Q9Y217 621 aa16.72■□□□□ 0.27
APOB-202ENST00000399256 ITSN1Q15811 1721 aa16.72■□□□□ 0.27
APOB-202ENST00000399256 PEAK1Q9H792 1746 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms