RNA–Protein interactions for RNA: ENST00000398838.8

YPEL3-201, Transcript of yippee like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YPEL3, Length 935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YPEL3-201ENST00000398838 USP42Q9H9J4 1324 aaKnown RBP24.61■■□□□ 1.53
YPEL3-201ENST00000398838 MCM10Q7L590 875 aa24.6■■□□□ 1.53
YPEL3-201ENST00000398838 TAF7Q15545 349 aaPredicted RBP24.59■■□□□ 1.53
YPEL3-201ENST00000398838 NFE2L2Q16236 605 aa24.59■■□□□ 1.53
YPEL3-201ENST00000398838 GRIN3BO60391 1043 aa24.58■■□□□ 1.53
YPEL3-201ENST00000398838 ZPR1O75312 459 aa24.58■■□□□ 1.53
YPEL3-201ENST00000398838 ZBTB1Q9Y2K1 713 aa24.58■■□□□ 1.53
YPEL3-201ENST00000398838 PARP3Q9Y6F1 533 aa24.58■■□□□ 1.53
YPEL3-201ENST00000398838 PRKRIP1Q9H875 184 aaPredicted RBP24.57■■□□□ 1.52
YPEL3-201ENST00000398838 NARFQ9UHQ1 456 aa24.57■■□□□ 1.52
YPEL3-201ENST00000398838 MAPK8IP3Q9UPT6 1336 aa24.57■■□□□ 1.52
YPEL3-201ENST00000398838 COL15A1P39059 1388 aa24.56■■□□□ 1.52
YPEL3-201ENST00000398838 SRP68Q9UHB9 627 aaKnown RBP24.56■■□□□ 1.52
YPEL3-201ENST00000398838 A0A087WZG4 1122 aa24.55■■□□□ 1.52
YPEL3-201ENST00000398838 EIF5P55010 431 aaKnown RBP24.55■■□□□ 1.52
YPEL3-201ENST00000398838 TGFB2P61812 414 aa24.55■■□□□ 1.52
YPEL3-201ENST00000398838 DCTN1Q14203 1278 aa24.55■■□□□ 1.52
YPEL3-201ENST00000398838 KCNQ3O43525 872 aa24.54■■□□□ 1.52
YPEL3-201ENST00000398838 FKBP8Q14318 412 aa24.54■■□□□ 1.52
YPEL3-201ENST00000398838 PNISRQ8TF01 805 aaKnown RBP24.54■■□□□ 1.52
YPEL3-201ENST00000398838 TM4SF1P30408 202 aa24.53■■□□□ 1.52
YPEL3-201ENST00000398838 IL6STP40189 918 aaPredicted RBP24.53■■□□□ 1.52
YPEL3-201ENST00000398838 PELP1Q8IZL8 1130 aaKnown RBP24.53■■□□□ 1.52
YPEL3-201ENST00000398838 SNRPA1P09661 255 aaKnown RBP24.52■■□□□ 1.52
YPEL3-201ENST00000398838 CANXP27824 592 aaKnown RBP24.52■■□□□ 1.52
YPEL3-201ENST00000398838 USPL1Q5W0Q7 1092 aa24.52■■□□□ 1.52
YPEL3-201ENST00000398838 C10orf71Q711Q0 1435 aa24.52■■□□□ 1.52
YPEL3-201ENST00000398838 YBX3P16989 372 aaKnown RBP eCLIP24.51■■□□□ 1.512e-6■□□□□ 10.1
YPEL3-201ENST00000398838 KDM3BQ7LBC6 1761 aa24.5■■□□□ 1.51
YPEL3-201ENST00000398838 KIAA1551Q9HCM1 1747 aa24.49■■□□□ 1.51
YPEL3-201ENST00000398838 USP16Q9Y5T5 823 aa24.48■■□□□ 1.51
YPEL3-201ENST00000398838 N4BP2Q86UW6 1770 aaPredicted RBP24.47■■□□□ 1.51
YPEL3-201ENST00000398838 POLRMTO00411 1230 aaKnown RBP24.47■■□□□ 1.51
YPEL3-201ENST00000398838 A1BGP04217 495 aa24.47■■□□□ 1.51
YPEL3-201ENST00000398838 DDR1Q08345 913 aa24.47■■□□□ 1.51
YPEL3-201ENST00000398838 WDR43Q15061 677 aaKnown RBP eCLIP24.47■■□□□ 1.51
YPEL3-201ENST00000398838 NPM2Q86SE8 214 aaKnown RBP24.47■■□□□ 1.51
YPEL3-201ENST00000398838 BCL2L12Q9HB09 334 aa24.47■■□□□ 1.51
YPEL3-201ENST00000398838 AFDNP55196 1824 aaKnown RBP24.47■■□□□ 1.51
YPEL3-201ENST00000398838 RIPK4P57078 832 aa24.46■■□□□ 1.51
YPEL3-201ENST00000398838 LMOD3Q0VAK6 560 aa24.46■■□□□ 1.51
YPEL3-201ENST00000398838 NRXN2Q9P2S2 1712 aa24.46■■□□□ 1.51
YPEL3-201ENST00000398838 PXDNLA1KZ92 1463 aa24.45■■□□□ 1.51
YPEL3-201ENST00000398838 TMPOP42166 694 aaKnown RBP24.45■■□□□ 1.5
YPEL3-201ENST00000398838 BABAM1Q9NWV8 329 aa24.45■■□□□ 1.5
YPEL3-201ENST00000398838 BRCA1P38398 1863 aaKnown RBP24.45■■□□□ 1.5
YPEL3-201ENST00000398838 NFIXQ14938 502 aa24.44■■□□□ 1.5
YPEL3-201ENST00000398838 RUNDC1Q96C34 613 aa24.44■■□□□ 1.5
YPEL3-201ENST00000398838 MIS18AQ9NYP9 233 aa24.44■■□□□ 1.5
YPEL3-201ENST00000398838 ANP32CO43423 234 aa24.43■■□□□ 1.5
YPEL3-201ENST00000398838 LAMB4A4D0S4 1761 aa24.43■■□□□ 1.5
YPEL3-201ENST00000398838 SCN7AQ01118 1682 aa24.43■■□□□ 1.5
YPEL3-201ENST00000398838 ADAMTS8Q9UP79 889 aa24.42■■□□□ 1.5
YPEL3-201ENST00000398838 A0A0G2JLW4 131 aa24.41■■□□□ 1.5
YPEL3-201ENST00000398838 PRAMEF22A3QJZ6 481 aa24.41■■□□□ 1.5
YPEL3-201ENST00000398838 RGL2O15211 777 aa24.41■■□□□ 1.5
YPEL3-201ENST00000398838 EIF4A1P60842 406 aaKnown RBP24.41■■□□□ 1.5
YPEL3-201ENST00000398838 CCER2I3L3R5 266 aa24.4■■□□□ 1.5
YPEL3-201ENST00000398838 GIGYF1O75420 1035 aaPredicted RBP24.4■■□□□ 1.5
YPEL3-201ENST00000398838 SERPINB2P05120 415 aa24.4■■□□□ 1.5
YPEL3-201ENST00000398838 THUMPD2Q9BTF0 503 aaKnown RBP24.4■■□□□ 1.5
YPEL3-201ENST00000398838 TBC1D2BQ9UPU7 963 aa24.4■■□□□ 1.5
YPEL3-201ENST00000398838 BCORQ6W2J9 1755 aa24.39■■□□□ 1.5
YPEL3-201ENST00000398838 DPEP1P16444 411 aa24.39■■□□□ 1.49
YPEL3-201ENST00000398838 CLEC4GQ6UXB4 293 aa24.39■■□□□ 1.49
YPEL3-201ENST00000398838 ZNF330Q9Y3S2 320 aaPredicted RBP24.39■■□□□ 1.49
YPEL3-201ENST00000398838 ARFGEF1Q9Y6D6 1849 aa24.39■■□□□ 1.49
YPEL3-201ENST00000398838 CAMTA2O94983 1202 aa24.38■■□□□ 1.49
YPEL3-201ENST00000398838 KCNA3P22001 575 aa24.38■■□□□ 1.49
YPEL3-201ENST00000398838 DZIP3Q86Y13 1208 aaKnown RBP24.38■■□□□ 1.49
YPEL3-201ENST00000398838 ZNF784Q8NCA9 323 aaPredicted RBP24.38■■□□□ 1.49
YPEL3-201ENST00000398838 CCDC146Q8IYE0 955 aa24.37■■□□□ 1.49
YPEL3-201ENST00000398838 PIM2Q9P1W9 311 aa24.37■■□□□ 1.49
YPEL3-201ENST00000398838 NBPF26B4DH59 902 aa24.36■■□□□ 1.49
YPEL3-201ENST00000398838 TBC1D9BQ66K14 1250 aa24.36■■□□□ 1.49
YPEL3-201ENST00000398838 NBPF10Q6P3W6 841 aaKnown RBP24.36■■□□□ 1.49
YPEL3-201ENST00000398838 NBPF15Q8N660 670 aa24.36■■□□□ 1.49
YPEL3-201ENST00000398838 TSPYL4Q9UJ04 414 aa24.36■■□□□ 1.49
YPEL3-201ENST00000398838 CARMIL3Q8ND23 1372 aa24.34■■□□□ 1.49
YPEL3-201ENST00000398838 SETDB2Q96T68 719 aa24.34■■□□□ 1.49
YPEL3-201ENST00000398838 BCS1LQ9Y276 419 aa24.34■■□□□ 1.49
YPEL3-201ENST00000398838 ZNF652Q9Y2D9 606 aa24.34■■□□□ 1.49
YPEL3-201ENST00000398838 TRIM35Q9UPQ4 493 aa24.33■■□□□ 1.49
YPEL3-201ENST00000398838 PDZRN3Q9UPQ7 1066 aa24.33■■□□□ 1.49
YPEL3-201ENST00000398838 ERBB4Q15303 1308 aa24.33■■□□□ 1.48
YPEL3-201ENST00000398838 DLEC1Q9Y238 1755 aa24.32■■□□□ 1.48
YPEL3-201ENST00000398838 PIP4K2AP48426 406 aaPredicted RBP24.32■■□□□ 1.48
YPEL3-201ENST00000398838 NEUROD2Q15784 382 aa24.32■■□□□ 1.48
YPEL3-201ENST00000398838 DALRD3Q5D0E6 543 aaKnown RBP24.32■■□□□ 1.48
YPEL3-201ENST00000398838 BICDL1Q6ZP65 573 aa24.32■■□□□ 1.48
YPEL3-201ENST00000398838 RRP7AQ9Y3A4 280 aaKnown RBP24.32■■□□□ 1.48
YPEL3-201ENST00000398838 WWC3Q9ULE0 1092 aa24.31■■□□□ 1.48
YPEL3-201ENST00000398838 CHL1O00533 1208 aa24.3■■□□□ 1.48
YPEL3-201ENST00000398838 CHRNA5P30532 468 aa24.29■■□□□ 1.48
YPEL3-201ENST00000398838 BRIP1Q9BX63 1249 aa24.29■■□□□ 1.48
YPEL3-201ENST00000398838 ANKRD31Q8N7Z5 1873 aa24.28■■□□□ 1.48
YPEL3-201ENST00000398838 ERVV-1B6SEH8 477 aa24.28■■□□□ 1.48
YPEL3-201ENST00000398838 PDE6BP35913 854 aa24.28■■□□□ 1.48
YPEL3-201ENST00000398838 PRR5LQ6MZQ0 368 aa24.28■■□□□ 1.48
YPEL3-201ENST00000398838 NUP98P52948 1817 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms