RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 CT47B1P0C2W7 299 aaPredicted RBP13.25□□□□□ -0.29
MSL3-207ENST00000398527 ZKSCAN8Q15776 578 aaPredicted RBP13.25□□□□□ -0.29
MSL3-207ENST00000398527 LMOD2Q6P5Q4 547 aa13.25□□□□□ -0.29
MSL3-207ENST00000398527 BSDC1Q9NW68 430 aaPredicted RBP13.25□□□□□ -0.29
MSL3-207ENST00000398527 WAPLQ7Z5K2 1190 aa13.24□□□□□ -0.29
MSL3-207ENST00000398527 TESPA1A2RU30 521 aaPredicted RBP13.24□□□□□ -0.29
MSL3-207ENST00000398527 DHX16O60231 1041 aaKnown RBP13.24□□□□□ -0.29
MSL3-207ENST00000398527 SSFA2P28290 1259 aa13.24□□□□□ -0.29
MSL3-207ENST00000398527 RBM26Q5T8P6 1007 aaKnown RBP13.24□□□□□ -0.29
MSL3-207ENST00000398527 CCDC146Q8IYE0 955 aa13.24□□□□□ -0.29
MSL3-207ENST00000398527 KNDC1Q76NI1 1749 aa13.23□□□□□ -0.29
MSL3-207ENST00000398527 FAM161AQ3B820 660 aa13.23□□□□□ -0.29
MSL3-207ENST00000398527 RGPD8O14715 1765 aaPredicted RBP13.23□□□□□ -0.29
MSL3-207ENST00000398527 SETDB1Q15047 1291 aa13.23□□□□□ -0.29
MSL3-207ENST00000398527 DDX46Q7L014 1031 aaKnown RBP13.23□□□□□ -0.29
MSL3-207ENST00000398527 BORCS6Q96GS4 357 aa13.23□□□□□ -0.29
MSL3-207ENST00000398527 CEP350Q5VT06 3117 aa13.23□□□□□ -0.29
MSL3-207ENST00000398527 SPATA31A1Q5TZJ5 1347 aa13.22□□□□□ -0.29
MSL3-207ENST00000398527 GIGYF1O75420 1035 aaPredicted RBP13.22□□□□□ -0.29
MSL3-207ENST00000398527 NPM3O75607 178 aaKnown RBP13.22□□□□□ -0.29
MSL3-207ENST00000398527 GTPBP4Q9BZE4 634 aaKnown RBP13.22□□□□□ -0.29
MSL3-207ENST00000398527 CABP2Q9NPB3 220 aa13.22□□□□□ -0.29
MSL3-207ENST00000398527 COL3A1P02461 1466 aaPredicted RBP13.22□□□□□ -0.29
MSL3-207ENST00000398527 PRAM1Q96QH2 718 aa13.21□□□□□ -0.29
MSL3-207ENST00000398527 POGKQ9P215 609 aa13.21□□□□□ -0.29
MSL3-207ENST00000398527 MRVI1Q9Y6F6 885 aa13.21□□□□□ -0.29
MSL3-207ENST00000398527 TRPM3Q9HCF6 1732 aaPredicted RBP13.21□□□□□ -0.3
MSL3-207ENST00000398527 MKL1Q969V6 931 aa13.21□□□□□ -0.3
MSL3-207ENST00000398527 PPME1Q9Y570 386 aa13.21□□□□□ -0.3
MSL3-207ENST00000398527 RGPD3A6NKT7 1758 aaPredicted RBP13.2□□□□□ -0.3
MSL3-207ENST00000398527 RGPD4Q7Z3J3 1758 aa13.2□□□□□ -0.3
MSL3-207ENST00000398527 GOLGA6L3A6NEY3 463 aa13.2□□□□□ -0.3
MSL3-207ENST00000398527 MSL3Q8N5Y2 521 aaKnown RBP13.2□□□□□ -0.3
MSL3-207ENST00000398527 ALS2Q96Q42 1657 aa13.2□□□□□ -0.3
MSL3-207ENST00000398527 SRPK2P78362 688 aaKnown RBP13.19□□□□□ -0.3
MSL3-207ENST00000398527 ATL2Q8NHH9 583 aa13.19□□□□□ -0.3
MSL3-207ENST00000398527 RBM27Q9P2N5 1060 aaKnown RBP13.19□□□□□ -0.3
MSL3-207ENST00000398527 CRYBG1Q9Y4K1 1723 aa13.19□□□□□ -0.3
MSL3-207ENST00000398527 MAPK8IP3Q9UPT6 1336 aa13.19□□□□□ -0.3
MSL3-207ENST00000398527 A0A1W2PP64 1363 aa13.19□□□□□ -0.3
MSL3-207ENST00000398527 ZSCAN20P17040 1043 aaPredicted RBP13.19□□□□□ -0.3
MSL3-207ENST00000398527 PTGER2P43116 358 aa13.19□□□□□ -0.3
MSL3-207ENST00000398527 TCP11L2Q8N4U5 519 aa13.19□□□□□ -0.3
MSL3-207ENST00000398527 MTHFSP49914 203 aa13.18□□□□□ -0.3
MSL3-207ENST00000398527 IRX5P78411 483 aaPredicted RBP13.18□□□□□ -0.3
MSL3-207ENST00000398527 SAFB2Q14151 953 aaKnown RBP eCLIP13.18□□□□□ -0.3
MSL3-207ENST00000398527 KIF20BQ96Q89 1820 aa13.18□□□□□ -0.3
MSL3-207ENST00000398527 IL16Q14005 1332 aa13.18□□□□□ -0.3
MSL3-207ENST00000398527 CD163L1Q9NR16 1453 aa13.18□□□□□ -0.3
MSL3-207ENST00000398527 C8orf34Q49A92 452 aa13.18□□□□□ -0.3
MSL3-207ENST00000398527 MINK1Q8N4C8 1332 aaPredicted RBP13.18□□□□□ -0.3
MSL3-207ENST00000398527 RARSP54136 660 aaKnown RBP13.17□□□□□ -0.3
MSL3-207ENST00000398527 GET4Q7L5D6 327 aaPredicted RBP13.17□□□□□ -0.3
MSL3-207ENST00000398527 CLUAP1Q96AJ1 413 aa13.17□□□□□ -0.3
MSL3-207ENST00000398527 SYT17Q9BSW7 474 aa13.17□□□□□ -0.3
MSL3-207ENST00000398527 BCAR3O75815 825 aa13.17□□□□□ -0.3
MSL3-207ENST00000398527 FHDC1Q9C0D6 1143 aaPredicted RBP13.17□□□□□ -0.3
MSL3-207ENST00000398527 SUGT1Q9Y2Z0 365 aa13.17□□□□□ -0.3
MSL3-207ENST00000398527 CEP83Q9Y592 693 aa13.17□□□□□ -0.3
MSL3-207ENST00000398527 ZBTB7AO95365 584 aa13.16□□□□□ -0.3
MSL3-207ENST00000398527 PMFBP1Q8TBY8 1022 aa13.16□□□□□ -0.3
MSL3-207ENST00000398527 PRDM11Q9NQV5 511 aa13.16□□□□□ -0.3
MSL3-207ENST00000398527 UTRNP46939 3433 aa13.16□□□□□ -0.3
MSL3-207ENST00000398527 ATP7BP35670 1465 aa13.16□□□□□ -0.3
MSL3-207ENST00000398527 NEUROD2Q15784 382 aa13.16□□□□□ -0.3
MSL3-207ENST00000398527 KRBA2Q6ZNG9 492 aa13.16□□□□□ -0.3
MSL3-207ENST00000398527 FRAT1Q92837 279 aaPredicted RBP13.16□□□□□ -0.3
MSL3-207ENST00000398527 SIRT1Q96EB6 747 aa13.16□□□□□ -0.3
MSL3-207ENST00000398527 CDK19Q9BWU1 502 aa13.16□□□□□ -0.3
MSL3-207ENST00000398527 NUB1Q9Y5A7 615 aa13.16□□□□□ -0.3
MSL3-207ENST00000398527 IPO8O15397 1037 aaKnown RBP13.15□□□□□ -0.3
MSL3-207ENST00000398527 GORABQ5T7V8 394 aa13.15□□□□□ -0.3
MSL3-207ENST00000398527 BARGINQ6ZT62 677 aa13.15□□□□□ -0.3
MSL3-207ENST00000398527 PDGFDQ9GZP0 370 aaPredicted RBP13.15□□□□□ -0.3
MSL3-207ENST00000398527 ZNF280DQ6N043 979 aa13.14□□□□□ -0.31
MSL3-207ENST00000398527 HDGFL2Q7Z4V5 671 aaPredicted RBP13.14□□□□□ -0.31
MSL3-207ENST00000398527 STK24Q9Y6E0 443 aa13.14□□□□□ -0.31
MSL3-207ENST00000398527 RHBDL3P58872 404 aa13.14□□□□□ -0.31
MSL3-207ENST00000398527 CT47A1Q5JQC4 288 aaPredicted RBP13.13□□□□□ -0.31
MSL3-207ENST00000398527 RBM28Q9NW13 759 aaKnown RBP13.13□□□□□ -0.31
MSL3-207ENST00000398527 ANKARQ7Z5J8 1434 aa13.13□□□□□ -0.31
MSL3-207ENST00000398527 MTERF4Q7Z6M4 381 aaKnown RBP13.13□□□□□ -0.31
MSL3-207ENST00000398527 ATF5Q9Y2D1 282 aaPredicted RBP13.13□□□□□ -0.31
MSL3-207ENST00000398527 PLSCR1O15162 318 aa13.12□□□□□ -0.31
MSL3-207ENST00000398527 ERCC3P19447 782 aa13.12□□□□□ -0.31
MSL3-207ENST00000398527 ANKRD13AQ8IZ07 590 aa13.12□□□□□ -0.31
MSL3-207ENST00000398527 CCDC97Q96F63 343 aaPredicted RBP13.12□□□□□ -0.31
MSL3-207ENST00000398527 PLEKHF1Q96S99 279 aa13.12□□□□□ -0.31
MSL3-207ENST00000398527 GPBP1L1Q9HC44 474 aaPredicted RBP13.12□□□□□ -0.31
MSL3-207ENST00000398527 SHANK3Q9BYB0 1731 aa13.12□□□□□ -0.31
MSL3-207ENST00000398527 CREBRFQ8IUR6 639 aa13.12□□□□□ -0.31
MSL3-207ENST00000398527 ITFG2Q969R8 447 aa13.12□□□□□ -0.31
MSL3-207ENST00000398527 ZBTB9Q96C00 473 aa13.12□□□□□ -0.31
MSL3-207ENST00000398527 CALR3Q96L12 384 aaKnown RBP13.12□□□□□ -0.31
MSL3-207ENST00000398527 STRN4Q9NRL3 753 aa13.12□□□□□ -0.31
MSL3-207ENST00000398527 FEZ2Q9UHY8 353 aaPredicted RBP13.12□□□□□ -0.31
MSL3-207ENST00000398527 MAP3K5Q99683 1374 aa13.11□□□□□ -0.31
MSL3-207ENST00000398527 CALRP27797 417 aaKnown RBP13.11□□□□□ -0.31
MSL3-207ENST00000398527 PROCA1Q8NCQ7 364 aaPredicted RBP13.11□□□□□ -0.31
MSL3-207ENST00000398527 PIK3R5Q8WYR1 880 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms