RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 IFFO1Q0D2I5 559 aa17.44■□□□□ 0.38
CHL1-202ENST00000397491 KIF1BPQ96EK5 621 aa17.44■□□□□ 0.38
CHL1-202ENST00000397491 NFE2L2Q16236 605 aa17.44■□□□□ 0.38
CHL1-202ENST00000397491 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.44■□□□□ 0.38
CHL1-202ENST00000397491 TIAM1Q13009 1591 aa17.43■□□□□ 0.38
CHL1-202ENST00000397491 EVA1CP58658 441 aa17.43■□□□□ 0.38
CHL1-202ENST00000397491 CTNNA3Q9UI47 895 aa17.43■□□□□ 0.38
CHL1-202ENST00000397491 PTGS1P23219 599 aa17.43■□□□□ 0.38
CHL1-202ENST00000397491 TTC22Q5TAA0 569 aa17.43■□□□□ 0.38
CHL1-202ENST00000397491 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.43■□□□□ 0.38
CHL1-202ENST00000397491 U2AF2P26368 475 aaKnown RBP eCLIP17.43■□□□□ 0.38
CHL1-202ENST00000397491 DNA2P51530 1060 aa17.43■□□□□ 0.38
CHL1-202ENST00000397491 NUTM2GQ5VZR2 741 aa17.43■□□□□ 0.38
CHL1-202ENST00000397491 CCDC175P0C221 793 aa17.42■□□□□ 0.38
CHL1-202ENST00000397491 MAP3K1Q13233 1512 aa17.42■□□□□ 0.38
CHL1-202ENST00000397491 NUCB1Q02818 461 aa17.42■□□□□ 0.38
CHL1-202ENST00000397491 ZHX3Q9H4I2 956 aa17.42■□□□□ 0.38
CHL1-202ENST00000397491 C8orf76Q96K31 380 aa17.42■□□□□ 0.38
CHL1-202ENST00000397491 ANKRD18AQ8IVF6 992 aa17.42■□□□□ 0.38
CHL1-202ENST00000397491 GTF3C6Q969F1 213 aa17.42■□□□□ 0.38
CHL1-202ENST00000397491 HDAC1Q13547 482 aaPredicted RBP17.41■□□□□ 0.38
CHL1-202ENST00000397491 RBSNQ9H1K0 784 aa17.41■□□□□ 0.38
CHL1-202ENST00000397491 RNF216Q9NWF9 866 aaPredicted RBP17.41■□□□□ 0.38
CHL1-202ENST00000397491 TERF1P54274 439 aa17.41■□□□□ 0.38
CHL1-202ENST00000397491 FKBP4Q02790 459 aaKnown RBP eCLIP17.41■□□□□ 0.38
CHL1-202ENST00000397491 RAPGEF4Q8WZA2 1011 aa17.41■□□□□ 0.38
CHL1-202ENST00000397491 SPG7Q9UQ90 795 aa17.41■□□□□ 0.38
CHL1-202ENST00000397491 PRDM2Q13029 1718 aa17.41■□□□□ 0.38
CHL1-202ENST00000397491 CNNM3Q8NE01 707 aa17.41■□□□□ 0.38
CHL1-202ENST00000397491 ISM2Q6H9L7 571 aa17.41■□□□□ 0.38
CHL1-202ENST00000397491 DNAJC5BQ9UF47 199 aa17.41■□□□□ 0.38
CHL1-202ENST00000397491 NSD3Q9BZ95 1437 aa17.41■□□□□ 0.38
CHL1-202ENST00000397491 YEATS4O95619 227 aa17.4■□□□□ 0.38
CHL1-202ENST00000397491 SEPT11Q9NVA2 429 aaKnown RBP17.4■□□□□ 0.38
CHL1-202ENST00000397491 SPECC1Q5M775 1068 aa17.4■□□□□ 0.38
CHL1-202ENST00000397491 NLRP6P59044 892 aa17.4■□□□□ 0.38
CHL1-202ENST00000397491 CEP131Q9UPN4 1083 aa17.4■□□□□ 0.38
CHL1-202ENST00000397491 ATP2C2O75185 946 aa17.4■□□□□ 0.38
CHL1-202ENST00000397491 MYRIPQ8NFW9 859 aa17.4■□□□□ 0.38
CHL1-202ENST00000397491 VPS18Q9P253 973 aa17.4■□□□□ 0.38
CHL1-202ENST00000397491 SRRTQ9BXP5 876 aaKnown RBP17.39■□□□□ 0.38
CHL1-202ENST00000397491 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.39■□□□□ 0.37
CHL1-202ENST00000397491 EZRP15311 586 aaKnown RBP17.39■□□□□ 0.37
CHL1-202ENST00000397491 HLTFQ14527 1009 aaKnown RBP eCLIP17.39■□□□□ 0.37
CHL1-202ENST00000397491 WASF1Q92558 559 aa17.39■□□□□ 0.37
CHL1-202ENST00000397491 DNAJC25Q9H1X3 360 aa17.39■□□□□ 0.37
CHL1-202ENST00000397491 USO1O60763 962 aaKnown RBP17.39■□□□□ 0.37
CHL1-202ENST00000397491 CABP1Q9NZU7 370 aa17.39■□□□□ 0.37
CHL1-202ENST00000397491 SMC1AQ14683 1233 aaKnown RBP17.38■□□□□ 0.37
CHL1-202ENST00000397491 MAATS1Q7Z4T9 603 aa17.38■□□□□ 0.37
CHL1-202ENST00000397491 ZBTB9Q96C00 473 aa17.38■□□□□ 0.37
CHL1-202ENST00000397491 PRAM1Q96QH2 718 aa17.38■□□□□ 0.37
CHL1-202ENST00000397491 NACAP1Q9BZK3 213 aa17.38■□□□□ 0.37
CHL1-202ENST00000397491 HSPA4P34932 840 aa17.38■□□□□ 0.37
CHL1-202ENST00000397491 CCDC178Q5BJE1 867 aa17.38■□□□□ 0.37
CHL1-202ENST00000397491 KRBA2Q6ZNG9 492 aa17.38■□□□□ 0.37
CHL1-202ENST00000397491 DACT1Q9NYF0 836 aa17.38■□□□□ 0.37
CHL1-202ENST00000397491 CTAGE15A4D2H0 777 aa17.37■□□□□ 0.37
CHL1-202ENST00000397491 CTAGE8P0CG41 777 aa17.37■□□□□ 0.37
CHL1-202ENST00000397491 CTAGE6Q86UF2 777 aa17.37■□□□□ 0.37
CHL1-202ENST00000397491 CTAGE4Q8IX94 777 aa17.37■□□□□ 0.37
CHL1-202ENST00000397491 GOPCQ9HD26 462 aa17.37■□□□□ 0.37
CHL1-202ENST00000397491 RIOK3O14730 519 aaKnown RBP17.37■□□□□ 0.37
CHL1-202ENST00000397491 MATR3P43243 847 aaKnown RBP eCLIP17.37■□□□□ 0.37
CHL1-202ENST00000397491 GABPB1Q06547 395 aaPredicted RBP17.37■□□□□ 0.37
CHL1-202ENST00000397491 U3KPZ7 1027 aaPredicted RBP17.37■□□□□ 0.37
CHL1-202ENST00000397491 CCDC57Q2TAC2 916 aa17.37■□□□□ 0.37
CHL1-202ENST00000397491 TSHZ3Q63HK5 1081 aa17.37■□□□□ 0.37
CHL1-202ENST00000397491 SAMD1Q6SPF0 538 aaPredicted RBP17.37■□□□□ 0.37
CHL1-202ENST00000397491 BOLA2Q9H3K6 86 aa17.37■□□□□ 0.37
CHL1-202ENST00000397491 UBASH3AP57075 661 aa17.36■□□□□ 0.37
CHL1-202ENST00000397491 EBAG9O00559 213 aa17.36■□□□□ 0.37
CHL1-202ENST00000397491 FKBP15Q5T1M5 1219 aa17.36■□□□□ 0.37
CHL1-202ENST00000397491 CEP57Q86XR8 500 aa17.36■□□□□ 0.37
CHL1-202ENST00000397491 JADE2Q9NQC1 790 aa17.36■□□□□ 0.37
CHL1-202ENST00000397491 CTDP1Q9Y5B0 961 aaPredicted RBP17.36■□□□□ 0.37
CHL1-202ENST00000397491 ABCC11Q96J66 1382 aa17.36■□□□□ 0.37
CHL1-202ENST00000397491 SYNJ2O15056 1496 aa17.36■□□□□ 0.37
CHL1-202ENST00000397491 PHACTR2O75167 634 aa17.36■□□□□ 0.37
CHL1-202ENST00000397491 SDSP20132 328 aa17.36■□□□□ 0.37
CHL1-202ENST00000397491 MEX3CQ5U5Q3 659 aaKnown RBP17.36■□□□□ 0.37
CHL1-202ENST00000397491 CCT2P78371 535 aaKnown RBP17.36■□□□□ 0.37
CHL1-202ENST00000397491 SYNJ1O43426 1573 aa17.36■□□□□ 0.37
CHL1-202ENST00000397491 TUBB4AP04350 444 aa17.35■□□□□ 0.37
CHL1-202ENST00000397491 TYRO3Q06418 890 aa17.35■□□□□ 0.37
CHL1-202ENST00000397491 A0A1B0GUL7 405 aa17.35■□□□□ 0.37
CHL1-202ENST00000397491 SSBP05455 408 aaKnown RBP eCLIP17.35■□□□□ 0.37
CHL1-202ENST00000397491 ZGPATQ8N5A5 531 aaKnown RBP17.35■□□□□ 0.37
CHL1-202ENST00000397491 GOLGA1Q92805 767 aa17.35■□□□□ 0.37
CHL1-202ENST00000397491 NAA15Q9BXJ9 866 aaKnown RBP17.35■□□□□ 0.37
CHL1-202ENST00000397491 MIS18AQ9NYP9 233 aa17.35■□□□□ 0.37
CHL1-202ENST00000397491 HSF2BPO75031 334 aa17.35■□□□□ 0.37
CHL1-202ENST00000397491 DNM1Q05193 864 aaKnown RBP17.35■□□□□ 0.37
CHL1-202ENST00000397491 SYT10Q6XYQ8 523 aa17.35■□□□□ 0.37
CHL1-202ENST00000397491 CCDC91Q7Z6B0 441 aa17.35■□□□□ 0.37
CHL1-202ENST00000397491 TDO2P48775 406 aa17.35■□□□□ 0.37
CHL1-202ENST00000397491 MRC2Q9UBG0 1479 aa17.34■□□□□ 0.37
CHL1-202ENST00000397491 SPECC1LQ69YQ0 1117 aa17.34■□□□□ 0.37
CHL1-202ENST00000397491 CACNA2D4Q7Z3S7 1137 aa17.34■□□□□ 0.37
CHL1-202ENST00000397491 F6X3S4 739 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms