RNA–Protein interactions for RNA: ENST00000397443.6

CPNE1-204, Transcript of copine 1, humanhuman

APPRIS P1 TSL 5

Gene CPNE1, Length 1,928 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-204ENST00000397443 PIP4K2AP48426 406 aaPredicted RBP27.04■■□□□ 1.92
CPNE1-204ENST00000397443 EXOC6Q8TAG9 804 aa27.04■■□□□ 1.92
CPNE1-204ENST00000397443 PROSER3Q2NL68 480 aa27.02■■□□□ 1.92
CPNE1-204ENST00000397443 PHAXQ9H814 394 aaKnown RBP27.02■■□□□ 1.92
CPNE1-204ENST00000397443 RGS12O14924 1447 aa27.02■■□□□ 1.92
CPNE1-204ENST00000397443 DZIP1LQ8IYY4 767 aaKnown RBP27.02■■□□□ 1.92
CPNE1-204ENST00000397443 CHMP4AQ9BY43 222 aa27.02■■□□□ 1.92
CPNE1-204ENST00000397443 COG6Q9Y2V7 657 aa27.02■■□□□ 1.92
CPNE1-204ENST00000397443 MYL6BP14649 208 aa27.01■■□□□ 1.91
CPNE1-204ENST00000397443 DBF4Q9UBU7 674 aaPredicted RBP27.01■■□□□ 1.91
CPNE1-204ENST00000397443 FLIIQ13045 1269 aa27■■□□□ 1.91
CPNE1-204ENST00000397443 PDE3AQ14432 1141 aa27■■□□□ 1.91
CPNE1-204ENST00000397443 DNAJC10Q8IXB1 793 aa27■■□□□ 1.91
CPNE1-204ENST00000397443 SLC4A9Q96Q91 983 aa27■■□□□ 1.91
CPNE1-204ENST00000397443 PALLDQ8WX93 1383 aa27■■□□□ 1.91
CPNE1-204ENST00000397443 FKBP5Q13451 457 aaPredicted RBP26.98■■□□□ 1.91
CPNE1-204ENST00000397443 FAM196AQ6ZSG2 479 aa26.98■■□□□ 1.91
CPNE1-204ENST00000397443 NHSQ6T4R5 1651 aa26.98■■□□□ 1.91
CPNE1-204ENST00000397443 SBF2Q86WG5 1849 aa26.98■■□□□ 1.91
CPNE1-204ENST00000397443 ARHGAP45Q92619 1136 aa26.98■■□□□ 1.91
CPNE1-204ENST00000397443 CACNA1FO60840 1977 aa26.97■■□□□ 1.91
CPNE1-204ENST00000397443 LAMB4A4D0S4 1761 aa26.97■■□□□ 1.91
CPNE1-204ENST00000397443 PDIA6Q15084 440 aa26.97■■□□□ 1.91
CPNE1-204ENST00000397443 API5Q9BZZ5 524 aaKnown RBP26.97■■□□□ 1.91
CPNE1-204ENST00000397443 BTAF1O14981 1849 aa26.97■■□□□ 1.91
CPNE1-204ENST00000397443 A1BGP04217 495 aa26.96■■□□□ 1.91
CPNE1-204ENST00000397443 PTPRCP08575 1304 aa26.96■■□□□ 1.91
CPNE1-204ENST00000397443 F6X3S4 739 aa26.96■■□□□ 1.91
CPNE1-204ENST00000397443 AIMP1Q12904 312 aaKnown RBP26.96■■□□□ 1.91
CPNE1-204ENST00000397443 VSIG10Q8N0Z9 540 aa26.96■■□□□ 1.91
CPNE1-204ENST00000397443 TMEM57Q8N5G2 664 aa26.96■■□□□ 1.91
CPNE1-204ENST00000397443 SMARCC1Q92922 1105 aaPredicted RBP26.96■■□□□ 1.91
CPNE1-204ENST00000397443 DDX21Q9NR30 783 aaKnown RBP eCLIP26.96■■□□□ 1.91
CPNE1-204ENST00000397443 LOC102724428A0A0B4J2F2 783 aa26.95■■□□□ 1.9
CPNE1-204ENST00000397443 TRIM37O94972 964 aa26.95■■□□□ 1.9
CPNE1-204ENST00000397443 MS4A1P11836 297 aa26.95■■□□□ 1.9
CPNE1-204ENST00000397443 ATP6V1AP38606 617 aa26.95■■□□□ 1.9
CPNE1-204ENST00000397443 SIK1P57059 783 aa26.95■■□□□ 1.9
CPNE1-204ENST00000397443 ITPRIPQ8IWB1 547 aa26.95■■□□□ 1.9
CPNE1-204ENST00000397443 KCNQ4P56696 695 aa26.94■■□□□ 1.9
CPNE1-204ENST00000397443 HYPKQ9NX55 129 aa26.94■■□□□ 1.9
CPNE1-204ENST00000397443 SLC4A10Q6U841 1118 aa26.93■■□□□ 1.9
CPNE1-204ENST00000397443 STARD3NLO95772 234 aa26.92■■□□□ 1.9
CPNE1-204ENST00000397443 TEX13AQ9BXU3 409 aaPredicted RBP26.92■■□□□ 1.9
CPNE1-204ENST00000397443 BCL11BQ9C0K0 894 aaPredicted RBP26.92■■□□□ 1.9
CPNE1-204ENST00000397443 NBPF26B4DH59 902 aa26.92■■□□□ 1.9
CPNE1-204ENST00000397443 NBPF14Q5TI25 921 aa26.92■■□□□ 1.9
CPNE1-204ENST00000397443 NBPF10Q6P3W6 841 aaKnown RBP26.92■■□□□ 1.9
CPNE1-204ENST00000397443 NBPF15Q8N660 670 aa26.92■■□□□ 1.9
CPNE1-204ENST00000397443 ZNF330Q9Y3S2 320 aaPredicted RBP26.92■■□□□ 1.9
CPNE1-204ENST00000397443 MVPQ14764 893 aaKnown RBP26.9■■□□□ 1.9
CPNE1-204ENST00000397443 ABCC4O15439 1325 aa26.9■■□□□ 1.9
CPNE1-204ENST00000397443 TJP1Q07157 1748 aa26.89■■□□□ 1.9
CPNE1-204ENST00000397443 CYP19A1P11511 503 aaPredicted RBP26.89■■□□□ 1.9
CPNE1-204ENST00000397443 ITPK1Q13572 414 aa26.89■■□□□ 1.9
CPNE1-204ENST00000397443 XAGE3Q8WTP9 111 aa26.89■■□□□ 1.9
CPNE1-204ENST00000397443 COPS6Q7L5N1 327 aa26.88■■□□□ 1.89
CPNE1-204ENST00000397443 PI4KAP2A4QPH2 592 aa26.88■■□□□ 1.89
CPNE1-204ENST00000397443 ERICH6BQ5W0A0 696 aa26.88■■□□□ 1.89
CPNE1-204ENST00000397443 PI4KAP1Q8N8J0 262 aa26.88■■□□□ 1.89
CPNE1-204ENST00000397443 LRP10Q7Z4F1 713 aa26.86■■□□□ 1.89
CPNE1-204ENST00000397443 ERBB4Q15303 1308 aa26.86■■□□□ 1.89
CPNE1-204ENST00000397443 PPP4R2Q9NY27 417 aa26.84■■□□□ 1.89
CPNE1-204ENST00000397443 ZBTB1Q9Y2K1 713 aa26.84■■□□□ 1.89
CPNE1-204ENST00000397443 ARXQ96QS3 562 aa26.84■■□□□ 1.89
CPNE1-204ENST00000397443 CCNL1Q9UK58 526 aaPredicted RBP26.84■■□□□ 1.89
CPNE1-204ENST00000397443 DDX19BQ9UMR2 479 aa26.84■■□□□ 1.89
CPNE1-204ENST00000397443 MAP3K2Q9Y2U5 619 aa26.84■■□□□ 1.89
CPNE1-204ENST00000397443 ADCY9O60503 1353 aa26.83■■□□□ 1.89
CPNE1-204ENST00000397443 CRKLP46109 303 aaKnown RBP26.83■■□□□ 1.89
CPNE1-204ENST00000397443 DDX58O95786 925 aaKnown RBP26.82■■□□□ 1.88
CPNE1-204ENST00000397443 B4GALNT3Q6L9W6 998 aa26.82■■□□□ 1.88
CPNE1-204ENST00000397443 DNAAF4Q8WXU2 420 aa26.82■■□□□ 1.88
CPNE1-204ENST00000397443 RIC3Q7Z5B4 369 aa26.82■■□□□ 1.88
CPNE1-204ENST00000397443 INTS3Q68E01 1043 aaKnown RBP26.81■■□□□ 1.88
CPNE1-204ENST00000397443 KSR2Q6VAB6 950 aa26.81■■□□□ 1.88
CPNE1-204ENST00000397443 TTLL7Q6ZT98 887 aa26.81■■□□□ 1.88
CPNE1-204ENST00000397443 LINC00116Q8NCU8 138 aa26.81■■□□□ 1.88
CPNE1-204ENST00000397443 CCDC87Q9NVE4 849 aa26.8■■□□□ 1.88
CPNE1-204ENST00000397443 INTS5Q6P9B9 1019 aaKnown RBP26.79■■□□□ 1.88
CPNE1-204ENST00000397443 ANKRD13DQ6ZTN6 518 aa26.79■■□□□ 1.88
CPNE1-204ENST00000397443 CCT4P50991 539 aaKnown RBP26.78■■□□□ 1.88
CPNE1-204ENST00000397443 CCDC136Q96JN2 1154 aa26.78■■□□□ 1.88
CPNE1-204ENST00000397443 ZBTB3Q9H5J0 574 aa26.78■■□□□ 1.88
CPNE1-204ENST00000397443 LY75O60449 1722 aa26.77■■□□□ 1.88
CPNE1-204ENST00000397443 APBA3O96018 575 aa26.77■■□□□ 1.88
CPNE1-204ENST00000397443 MYH14Q7Z406 1995 aaKnown RBP26.77■■□□□ 1.88
CPNE1-204ENST00000397443 NPM2Q86SE8 214 aaKnown RBP26.77■■□□□ 1.88
CPNE1-204ENST00000397443 ZBTB7BO15156 539 aaPredicted RBP26.76■■□□□ 1.87
CPNE1-204ENST00000397443 COL5A3P25940 1745 aaPredicted RBP26.75■■□□□ 1.87
CPNE1-204ENST00000397443 SRCIN1Q9C0H9 1055 aa26.75■■□□□ 1.87
CPNE1-204ENST00000397443 BEND3Q5T5X7 828 aa26.75■■□□□ 1.87
CPNE1-204ENST00000397443 C1orf115Q9H7X2 142 aa26.75■■□□□ 1.87
CPNE1-204ENST00000397443 LRRC4BQ9NT99 713 aa26.75■■□□□ 1.87
CPNE1-204ENST00000397443 CICQ96RK0 1608 aaPredicted RBP26.74■■□□□ 1.87
CPNE1-204ENST00000397443 PLBD2Q8NHP8 589 aa26.74■■□□□ 1.87
CPNE1-204ENST00000397443 MYD88Q99836 296 aa26.74■■□□□ 1.87
CPNE1-204ENST00000397443 ZNF831Q5JPB2 1677 aa26.74■■□□□ 1.87
CPNE1-204ENST00000397443 IL6STP40189 918 aaPredicted RBP26.73■■□□□ 1.87
CPNE1-204ENST00000397443 CWF19L2Q2TBE0 894 aaKnown RBP26.73■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms