RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 BABAM1Q9NWV8 329 aa27.71■■■□□ 2.03
TSPAN4-206ENST00000397408 ATF5Q9Y2D1 282 aaPredicted RBP27.71■■■□□ 2.03
TSPAN4-206ENST00000397408 LAS1LQ9Y4W2 734 aaKnown RBP27.71■■■□□ 2.03
TSPAN4-206ENST00000397408 PRAMEF22A3QJZ6 481 aa27.7■■■□□ 2.03
TSPAN4-206ENST00000397408 SNRPA1P09661 255 aaKnown RBP27.7■■■□□ 2.03
TSPAN4-206ENST00000397408 ZBTB1Q9Y2K1 713 aa27.7■■■□□ 2.03
TSPAN4-206ENST00000397408 EIF4A1P60842 406 aaKnown RBP27.69■■■□□ 2.02
TSPAN4-206ENST00000397408 CALD1Q05682 793 aaKnown RBP27.68■■■□□ 2.02
TSPAN4-206ENST00000397408 CHL1O00533 1208 aa27.67■■■□□ 2.02
TSPAN4-206ENST00000397408 ADRA2BP18089 450 aa27.67■■■□□ 2.02
TSPAN4-206ENST00000397408 CCDC27Q2M243 656 aa27.67■■■□□ 2.02
TSPAN4-206ENST00000397408 TRAPPC3LQ5T215 181 aa27.67■■■□□ 2.02
TSPAN4-206ENST00000397408 LAMB4A4D0S4 1761 aa27.67■■■□□ 2.02
TSPAN4-206ENST00000397408 USP16Q9Y5T5 823 aa27.67■■■□□ 2.02
TSPAN4-206ENST00000397408 SOS1Q07889 1333 aaPredicted RBP27.66■■■□□ 2.02
TSPAN4-206ENST00000397408 C4AP0C0L4 1744 aa27.66■■■□□ 2.02
TSPAN4-206ENST00000397408 CANXP27824 592 aaKnown RBP27.66■■■□□ 2.02
TSPAN4-206ENST00000397408 CFAP44Q96MT7 982 aa27.66■■■□□ 2.02
TSPAN4-206ENST00000397408 SALL2Q9Y467 1007 aaPredicted RBP27.66■■■□□ 2.02
TSPAN4-206ENST00000397408 NCBP3Q53F19 620 aaKnown RBP27.65■■■□□ 2.02
TSPAN4-206ENST00000397408 MSL1Q68DK7 614 aa27.65■■■□□ 2.02
TSPAN4-206ENST00000397408 WWC1Q8IX03 1113 aa27.65■■■□□ 2.02
TSPAN4-206ENST00000397408 ARHGEF1Q92888 912 aaKnown RBP27.65■■■□□ 2.02
TSPAN4-206ENST00000397408 GIGYF1O75420 1035 aaPredicted RBP27.64■■■□□ 2.02
TSPAN4-206ENST00000397408 IFT57Q9NWB7 429 aa27.64■■■□□ 2.02
TSPAN4-206ENST00000397408 A1BGP04217 495 aa27.63■■■□□ 2.01
TSPAN4-206ENST00000397408 PTGER2P43116 358 aa27.63■■■□□ 2.01
TSPAN4-206ENST00000397408 COL15A1P39059 1388 aa27.63■■■□□ 2.01
TSPAN4-206ENST00000397408 ZNF853P0CG23 659 aa27.62■■■□□ 2.01
TSPAN4-206ENST00000397408 RFC4P35249 363 aa27.62■■■□□ 2.01
TSPAN4-206ENST00000397408 COL24A1Q17RW2 1714 aa27.62■■■□□ 2.01
TSPAN4-206ENST00000397408 GNAI1P63096 354 aa27.61■■■□□ 2.01
TSPAN4-206ENST00000397408 SGIP1Q9BQI5 828 aa27.61■■■□□ 2.01
TSPAN4-206ENST00000397408 MBIPQ9NS73 344 aa27.61■■■□□ 2.01
TSPAN4-206ENST00000397408 ZNF330Q9Y3S2 320 aaPredicted RBP27.59■■■□□ 2.01
TSPAN4-206ENST00000397408 PIP4K2AP48426 406 aaPredicted RBP27.58■■■□□ 2.01
TSPAN4-206ENST00000397408 EIF5P55010 431 aaKnown RBP27.58■■■□□ 2.01
TSPAN4-206ENST00000397408 PPP1R1BQ9UD71 204 aaPredicted RBP27.58■■■□□ 2.01
TSPAN4-206ENST00000397408 USP42Q9H9J4 1324 aaKnown RBP27.58■■■□□ 2.01
TSPAN4-206ENST00000397408 POLD1P28340 1107 aa27.58■■■□□ 2
TSPAN4-206ENST00000397408 IL6STP40189 918 aaPredicted RBP27.58■■■□□ 2
TSPAN4-206ENST00000397408 KRT24Q2M2I5 525 aa27.58■■■□□ 2
TSPAN4-206ENST00000397408 SRP68Q9UHB9 627 aaKnown RBP27.58■■■□□ 2
TSPAN4-206ENST00000397408 NGEFQ8N5V2 710 aa27.57■■■□□ 2
TSPAN4-206ENST00000397408 GYS1P13807 737 aa27.55■■■□□ 2
TSPAN4-206ENST00000397408 IL16Q14005 1332 aa27.54■■■□□ 2
TSPAN4-206ENST00000397408 NBPF26B4DH59 902 aa27.54■■■□□ 2
TSPAN4-206ENST00000397408 NBPF10Q6P3W6 841 aaKnown RBP27.54■■■□□ 2
TSPAN4-206ENST00000397408 NPM2Q86SE8 214 aaKnown RBP27.54■■■□□ 2
TSPAN4-206ENST00000397408 NBPF15Q8N660 670 aa27.54■■■□□ 2
TSPAN4-206ENST00000397408 A0A087WZG4 1122 aa27.53■■■□□ 2
TSPAN4-206ENST00000397408 ZPR1O75312 459 aa27.53■■■□□ 2
TSPAN4-206ENST00000397408 ARXQ96QS3 562 aa27.53■■■□□ 2
TSPAN4-206ENST00000397408 EIF2S2P20042 333 aaKnown RBP27.52■■■□□ 2
TSPAN4-206ENST00000397408 USPL1Q5W0Q7 1092 aa27.52■■■□□ 2
TSPAN4-206ENST00000397408 WDR63Q8IWG1 891 aa27.52■■■□□ 2
TSPAN4-206ENST00000397408 TSR2Q969E8 191 aaKnown RBP27.52■■■□□ 2
TSPAN4-206ENST00000397408 NARFQ9UHQ1 456 aa27.52■■■□□ 2
TSPAN4-206ENST00000397408 NLGN1Q8N2Q7 840 aa27.5■■□□□ 1.99
TSPAN4-206ENST00000397408 SCN7AQ01118 1682 aa27.5■■□□□ 1.99
TSPAN4-206ENST00000397408 DUSP27Q5VZP5 1158 aa27.5■■□□□ 1.99
TSPAN4-206ENST00000397408 TBC1D2BQ9UPU7 963 aa27.5■■□□□ 1.99
TSPAN4-206ENST00000397408 ERBB4Q15303 1308 aa27.49■■□□□ 1.99
TSPAN4-206ENST00000397408 MMP10P09238 476 aa27.49■■□□□ 1.99
TSPAN4-206ENST00000397408 HOXB7P09629 217 aa27.49■■□□□ 1.99
TSPAN4-206ENST00000397408 FKBP8Q14318 412 aa27.49■■□□□ 1.99
TSPAN4-206ENST00000397408 NECTIN2Q92692 538 aa27.49■■□□□ 1.99
TSPAN4-206ENST00000397408 MYL6BP14649 208 aa27.48■■□□□ 1.99
TSPAN4-206ENST00000397408 DZIP3Q86Y13 1208 aaKnown RBP27.48■■□□□ 1.99
TSPAN4-206ENST00000397408 ZNF521Q96K83 1311 aa27.47■■□□□ 1.99
TSPAN4-206ENST00000397408 HDGFL1Q5TGJ6 251 aa27.47■■□□□ 1.99
TSPAN4-206ENST00000397408 FANCIQ9NVI1 1328 aa27.47■■□□□ 1.99
TSPAN4-206ENST00000397408 BCL2L12Q9HB09 334 aa27.46■■□□□ 1.99
TSPAN4-206ENST00000397408 BCORQ6W2J9 1755 aa27.46■■□□□ 1.99
TSPAN4-206ENST00000397408 ELL2O00472 640 aaPredicted RBP27.45■■□□□ 1.98
TSPAN4-206ENST00000397408 C8orf58Q8NAV2 365 aa27.45■■□□□ 1.98
TSPAN4-206ENST00000397408 KLHL34Q8N239 644 aa27.44■■□□□ 1.98
TSPAN4-206ENST00000397408 FHDC1Q9C0D6 1143 aaPredicted RBP27.44■■□□□ 1.98
TSPAN4-206ENST00000397408 SPINK5Q9NQ38 1064 aaPredicted RBP27.44■■□□□ 1.98
TSPAN4-206ENST00000397408 CAMTA2O94983 1202 aa27.43■■□□□ 1.98
TSPAN4-206ENST00000397408 PDIA6Q15084 440 aa27.43■■□□□ 1.98
TSPAN4-206ENST00000397408 PROSER3Q2NL68 480 aa27.43■■□□□ 1.98
TSPAN4-206ENST00000397408 ANXA1P04083 346 aa27.42■■□□□ 1.98
TSPAN4-206ENST00000397408 TSPYL6Q8N831 410 aa27.41■■□□□ 1.98
TSPAN4-206ENST00000397408 MYH16Q9H6N6 1097 aa27.41■■□□□ 1.98
TSPAN4-206ENST00000397408 CHPF2Q9P2E5 772 aa27.41■■□□□ 1.98
TSPAN4-206ENST00000397408 DDR1Q08345 913 aa27.4■■□□□ 1.98
TSPAN4-206ENST00000397408 NFIXQ14938 502 aa27.4■■□□□ 1.98
TSPAN4-206ENST00000397408 LRP10Q7Z4F1 713 aa27.4■■□□□ 1.98
TSPAN4-206ENST00000397408 DDX21Q9NR30 783 aaKnown RBP eCLIP27.4■■□□□ 1.98
TSPAN4-206ENST00000397408 PARP3Q9Y6F1 533 aa27.4■■□□□ 1.98
TSPAN4-206ENST00000397408 GOLGA2Q08379 1002 aa27.39■■□□□ 1.97
TSPAN4-206ENST00000397408 TTLL7Q6ZT98 887 aa27.39■■□□□ 1.97
TSPAN4-206ENST00000397408 TM4SF1P30408 202 aa27.38■■□□□ 1.97
TSPAN4-206ENST00000397408 KIF6Q6ZMV9 814 aa27.38■■□□□ 1.97
TSPAN4-206ENST00000397408 BICDL1Q6ZP65 573 aa27.38■■□□□ 1.97
TSPAN4-206ENST00000397408 SYT17Q9BSW7 474 aa27.38■■□□□ 1.97
TSPAN4-206ENST00000397408 POLRMTO00411 1230 aaKnown RBP27.37■■□□□ 1.97
TSPAN4-206ENST00000397408 TWISTNBQ3B726 338 aaPredicted RBP27.37■■□□□ 1.97
TSPAN4-206ENST00000397408 TBC1D9BQ66K14 1250 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms