RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 ANXA1P04083 346 aa12.8□□□□□ -0.36
TUBB-208ENST00000396389 ASAP1Q9ULH1 1129 aa12.8□□□□□ -0.36
TUBB-208ENST00000396389 ZNF330Q9Y3S2 320 aaPredicted RBP12.8□□□□□ -0.36
TUBB-208ENST00000396389 RXRBP28702 533 aa12.8□□□□□ -0.36
TUBB-208ENST00000396389 MRE11P49959 708 aa12.8□□□□□ -0.36
TUBB-208ENST00000396389 SAMD1Q6SPF0 538 aaPredicted RBP12.8□□□□□ -0.36
TUBB-208ENST00000396389 NGEFQ8N5V2 710 aa12.8□□□□□ -0.36
TUBB-208ENST00000396389 ARID3AQ99856 593 aa12.8□□□□□ -0.36
TUBB-208ENST00000396389 RBM10P98175 930 aaKnown RBP12.79□□□□□ -0.36
TUBB-208ENST00000396389 ZNF772Q68DY9 489 aaPredicted RBP12.79□□□□□ -0.36
TUBB-208ENST00000396389 RBM42Q9BTD8 480 aaKnown RBP12.79□□□□□ -0.36
TUBB-208ENST00000396389 TAF7Q15545 349 aaPredicted RBP12.79□□□□□ -0.36
TUBB-208ENST00000396389 WDR63Q8IWG1 891 aa12.79□□□□□ -0.36
TUBB-208ENST00000396389 DCAF5Q96JK2 942 aa12.79□□□□□ -0.36
TUBB-208ENST00000396389 CFAP44Q96MT7 982 aa12.79□□□□□ -0.36
TUBB-208ENST00000396389 KDM6AO15550 1401 aaPredicted RBP12.79□□□□□ -0.36
TUBB-208ENST00000396389 SLC52A2Q9HAB3 445 aa12.78□□□□□ -0.36
TUBB-208ENST00000396389 TMOD3Q9NYL9 352 aa12.78□□□□□ -0.36
TUBB-208ENST00000396389 GNAI1P63096 354 aa12.78□□□□□ -0.36
TUBB-208ENST00000396389 CCDC27Q2M243 656 aa12.78□□□□□ -0.36
TUBB-208ENST00000396389 PIGBQ92521 554 aa12.78□□□□□ -0.36
TUBB-208ENST00000396389 C22orf23Q9BZE7 217 aa12.78□□□□□ -0.36
TUBB-208ENST00000396389 CHMP5Q9NZZ3 219 aa12.78□□□□□ -0.36
TUBB-208ENST00000396389 TRIM44Q96DX7 344 aaPredicted RBP12.78□□□□□ -0.36
TUBB-208ENST00000396389 FAM208AQ9UK61 1670 aaKnown RBP12.77□□□□□ -0.36
TUBB-208ENST00000396389 KCNA4P22459 653 aa12.77□□□□□ -0.36
TUBB-208ENST00000396389 PDE3AQ14432 1141 aa12.77□□□□□ -0.36
TUBB-208ENST00000396389 BARGINQ6ZT62 677 aa12.77□□□□□ -0.36
TUBB-208ENST00000396389 THRAP3Q9Y2W1 955 aaKnown RBP12.77□□□□□ -0.36
TUBB-208ENST00000396389 SMIM5Q71RC9 77 aa12.77□□□□□ -0.37
TUBB-208ENST00000396389 TTC5Q8N0Z6 440 aa12.77□□□□□ -0.37
TUBB-208ENST00000396389 TRIM37O94972 964 aa12.76□□□□□ -0.37
TUBB-208ENST00000396389 RBM6P78332 1123 aaKnown RBP12.76□□□□□ -0.37
TUBB-208ENST00000396389 TWISTNBQ3B726 338 aaPredicted RBP12.76□□□□□ -0.37
TUBB-208ENST00000396389 ZNF496Q96IT1 587 aaPredicted RBP12.76□□□□□ -0.37
TUBB-208ENST00000396389 IFT57Q9NWB7 429 aa12.76□□□□□ -0.37
TUBB-208ENST00000396389 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.76□□□□□ -0.37
TUBB-208ENST00000396389 CHL1O00533 1208 aa12.75□□□□□ -0.37
TUBB-208ENST00000396389 TPRNQ4KMQ1 711 aa12.75□□□□□ -0.37
TUBB-208ENST00000396389 ZNF790Q6PG37 636 aa12.75□□□□□ -0.37
TUBB-208ENST00000396389 KRT27Q7Z3Y8 459 aa12.75□□□□□ -0.37
TUBB-208ENST00000396389 CALD1Q05682 793 aaKnown RBP12.75□□□□□ -0.37
TUBB-208ENST00000396389 NCAPD2Q15021 1401 aa12.75□□□□□ -0.37
TUBB-208ENST00000396389 KIAA1211Q6ZU35 1233 aa12.75□□□□□ -0.37
TUBB-208ENST00000396389 SMC4Q9NTJ3 1288 aa12.75□□□□□ -0.37
TUBB-208ENST00000396389 DISP2A7MBM2 1401 aa12.74□□□□□ -0.37
TUBB-208ENST00000396389 RARSP54136 660 aaKnown RBP12.74□□□□□ -0.37
TUBB-208ENST00000396389 MYL6BP14649 208 aa12.74□□□□□ -0.37
TUBB-208ENST00000396389 ATRNO75882 1429 aa12.73□□□□□ -0.37
TUBB-208ENST00000396389 HSP90AB1P08238 724 aaKnown RBP12.73□□□□□ -0.37
TUBB-208ENST00000396389 ZNF853P0CG23 659 aa12.73□□□□□ -0.37
TUBB-208ENST00000396389 SSH1Q8WYL5 1049 aa12.73□□□□□ -0.37
TUBB-208ENST00000396389 TNPO1Q92973 898 aaKnown RBP12.73□□□□□ -0.37
TUBB-208ENST00000396389 DLG5Q8TDM6 1919 aa12.73□□□□□ -0.37
TUBB-208ENST00000396389 NRAPQ86VF7 1730 aa12.73□□□□□ -0.37
TUBB-208ENST00000396389 CEMIPQ8WUJ3 1361 aa12.73□□□□□ -0.37
TUBB-208ENST00000396389 GLI3P10071 1580 aa12.73□□□□□ -0.37
TUBB-208ENST00000396389 CDCA7Q9BWT1 371 aaPredicted RBP12.72□□□□□ -0.37
TUBB-208ENST00000396389 AIMP1Q12904 312 aaKnown RBP12.72□□□□□ -0.37
TUBB-208ENST00000396389 USP16Q9Y5T5 823 aa12.72□□□□□ -0.37
TUBB-208ENST00000396389 TNS2Q63HR2 1409 aa12.72□□□□□ -0.37
TUBB-208ENST00000396389 HTATSF1O43719 755 aaKnown RBP12.72□□□□□ -0.37
TUBB-208ENST00000396389 EIF4A1P60842 406 aaKnown RBP12.72□□□□□ -0.37
TUBB-208ENST00000396389 ATG3Q9NT62 314 aa12.72□□□□□ -0.37
TUBB-208ENST00000396389 HSCBQ8IWL3 235 aa12.71□□□□□ -0.37
TUBB-208ENST00000396389 ABCC6O95255 1503 aa12.71□□□□□ -0.38
TUBB-208ENST00000396389 VAMP4O75379 141 aa12.71□□□□□ -0.38
TUBB-208ENST00000396389 HDGFL1Q5TGJ6 251 aa12.71□□□□□ -0.38
TUBB-208ENST00000396389 SLC4A2P04920 1241 aa12.7□□□□□ -0.38
TUBB-208ENST00000396389 PROSER3Q2NL68 480 aa12.7□□□□□ -0.38
TUBB-208ENST00000396389 RWDD1Q9H446 243 aaPredicted RBP12.7□□□□□ -0.38
TUBB-208ENST00000396389 FAM13BQ9NYF5 915 aa12.7□□□□□ -0.38
TUBB-208ENST00000396389 CHPF2Q9P2E5 772 aa12.7□□□□□ -0.38
TUBB-208ENST00000396389 G2E3Q7L622 706 aa12.69□□□□□ -0.38
TUBB-208ENST00000396389 ERVV-2B6SEH9 535 aa12.69□□□□□ -0.38
TUBB-208ENST00000396389 CD2BP2O95400 341 aaKnown RBP12.69□□□□□ -0.38
TUBB-208ENST00000396389 A1BGP04217 495 aa12.69□□□□□ -0.38
TUBB-208ENST00000396389 NKX1-1Q15270 411 aaPredicted RBP12.69□□□□□ -0.38
TUBB-208ENST00000396389 DNAJC10Q8IXB1 793 aa12.69□□□□□ -0.38
TUBB-208ENST00000396389 PHAXQ9H814 394 aaKnown RBP12.69□□□□□ -0.38
TUBB-208ENST00000396389 SLC4A9Q96Q91 983 aa12.68□□□□□ -0.38
TUBB-208ENST00000396389 NOB1Q9ULX3 412 aaKnown RBP12.68□□□□□ -0.38
TUBB-208ENST00000396389 IL16Q14005 1332 aa12.68□□□□□ -0.38
TUBB-208ENST00000396389 DDX11L8A8MPP1 907 aa12.68□□□□□ -0.38
TUBB-208ENST00000396389 F6X3S4 739 aa12.68□□□□□ -0.38
TUBB-208ENST00000396389 ATP6V1AP38606 617 aa12.68□□□□□ -0.38
TUBB-208ENST00000396389 FBXO3Q9UK99 471 aa12.68□□□□□ -0.38
TUBB-208ENST00000396389 NWD2Q9ULI1 1742 aa12.68□□□□□ -0.38
TUBB-208ENST00000396389 GIGYF1O75420 1035 aaPredicted RBP12.68□□□□□ -0.38
TUBB-208ENST00000396389 SLC4A10Q6U841 1118 aa12.68□□□□□ -0.38
TUBB-208ENST00000396389 RGS12O14924 1447 aa12.68□□□□□ -0.38
TUBB-208ENST00000396389 ONECUT3O60422 494 aaPredicted RBP12.67□□□□□ -0.38
TUBB-208ENST00000396389 FMNL2Q96PY5 1086 aa12.67□□□□□ -0.38
TUBB-208ENST00000396389 PDCL3Q9H2J4 239 aa12.67□□□□□ -0.38
TUBB-208ENST00000396389 R3HCC1Q9Y3T6 440 aaKnown RBP12.67□□□□□ -0.38
TUBB-208ENST00000396389 PAXIP1Q6ZW49 1069 aaPredicted RBP12.66□□□□□ -0.38
TUBB-208ENST00000396389 VIRMAQ69YN4 1812 aaKnown RBP12.66□□□□□ -0.38
TUBB-208ENST00000396389 APBA3O96018 575 aa12.66□□□□□ -0.38
TUBB-208ENST00000396389 LRRC37A3O60309 1634 aa12.65□□□□□ -0.38
TUBB-208ENST00000396389 SSFA2P28290 1259 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms