RNA–Protein interactions for RNA: ENST00000395841.6

RAE1-203, Transcript of ribonucleic acid export 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAE1, Length 2,639 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-203ENST00000395841 NLRP2Q9NX02 1062 aa13.83□□□□□ -0.2
RAE1-203ENST00000395841 HEG1Q9ULI3 1381 aa13.83□□□□□ -0.2
RAE1-203ENST00000395841 NPHP3Q7Z494 1330 aa13.83□□□□□ -0.2
RAE1-203ENST00000395841 TSHZ3Q63HK5 1081 aa13.82□□□□□ -0.2
RAE1-203ENST00000395841 FOXD4L1Q9NU39 408 aa13.82□□□□□ -0.2
RAE1-203ENST00000395841 BRPF3Q9ULD4 1205 aa13.82□□□□□ -0.2
RAE1-203ENST00000395841 RGPD5Q99666 1765 aa13.82□□□□□ -0.2
RAE1-203ENST00000395841 GIGYF1O75420 1035 aaPredicted RBP13.82□□□□□ -0.2
RAE1-203ENST00000395841 ADCY9O60503 1353 aa13.82□□□□□ -0.2
RAE1-203ENST00000395841 ERBB3P21860 1342 aa13.82□□□□□ -0.2
RAE1-203ENST00000395841 ST18O60284 1047 aa13.81□□□□□ -0.2
RAE1-203ENST00000395841 L1TD1Q5T7N2 865 aaKnown RBP13.81□□□□□ -0.2
RAE1-203ENST00000395841 IL27Q8NEV9 243 aa13.81□□□□□ -0.2
RAE1-203ENST00000395841 NBPF7P0C2Y1 421 aaPredicted RBP13.81□□□□□ -0.2
RAE1-203ENST00000395841 CSB-PGBD3P0DP91 1061 aa13.81□□□□□ -0.2
RAE1-203ENST00000395841 ESYT1Q9BSJ8 1104 aa13.81□□□□□ -0.2
RAE1-203ENST00000395841 SRGAP3O43295 1099 aa13.8□□□□□ -0.2
RAE1-203ENST00000395841 SURF6O75683 361 aaKnown RBP13.8□□□□□ -0.2
RAE1-203ENST00000395841 PTMSP20962 102 aa13.8□□□□□ -0.2
RAE1-203ENST00000395841 SPATA31A3Q5VYP0 1347 aa13.8□□□□□ -0.2
RAE1-203ENST00000395841 ALS2Q96Q42 1657 aa13.8□□□□□ -0.2
RAE1-203ENST00000395841 ANXA1P04083 346 aa13.8□□□□□ -0.2
RAE1-203ENST00000395841 CHMLP26374 656 aa13.8□□□□□ -0.2
RAE1-203ENST00000395841 ADAMTS7Q9UKP4 1686 aa13.79□□□□□ -0.2
RAE1-203ENST00000395841 TRIM6-TRIM34B2RNG4 842 aa13.79□□□□□ -0.2
RAE1-203ENST00000395841 TUBGCP6Q96RT7 1819 aa13.79□□□□□ -0.2
RAE1-203ENST00000395841 ALDH1L1O75891 902 aa13.79□□□□□ -0.2
RAE1-203ENST00000395841 DCCP43146 1447 aa13.79□□□□□ -0.2
RAE1-203ENST00000395841 RHPN1Q8TCX5 695 aa13.79□□□□□ -0.2
RAE1-203ENST00000395841 RILPL2Q969X0 211 aa13.79□□□□□ -0.2
RAE1-203ENST00000395841 KIF1BPQ96EK5 621 aa13.79□□□□□ -0.2
RAE1-203ENST00000395841 IL1RAPL2Q9NP60 686 aa13.79□□□□□ -0.2
RAE1-203ENST00000395841 HSP90AB4PQ58FF6 505 aa13.78□□□□□ -0.2
RAE1-203ENST00000395841 KSR2Q6VAB6 950 aa13.78□□□□□ -0.2
RAE1-203ENST00000395841 CLEC17AQ6ZS10 378 aa13.78□□□□□ -0.2
RAE1-203ENST00000395841 HYPKQ9NX55 129 aa13.78□□□□□ -0.2
RAE1-203ENST00000395841 MTX1Q13505 466 aa13.78□□□□□ -0.2
RAE1-203ENST00000395841 RAPGEF4Q8WZA2 1011 aa13.78□□□□□ -0.2
RAE1-203ENST00000395841 MAP3K2Q9Y2U5 619 aa13.78□□□□□ -0.2
RAE1-203ENST00000395841 MCCP23508 829 aa13.77□□□□□ -0.2
RAE1-203ENST00000395841 GZF1Q9H116 711 aaPredicted RBP13.77□□□□□ -0.2
RAE1-203ENST00000395841 HDAC5Q9UQL6 1122 aa13.77□□□□□ -0.2
RAE1-203ENST00000395841 SIPA1L3O60292 1781 aaPredicted RBP13.77□□□□□ -0.2
RAE1-203ENST00000395841 FSD2A1L4K1 749 aa13.77□□□□□ -0.21
RAE1-203ENST00000395841 PRKCSHP14314 528 aaPredicted RBP13.77□□□□□ -0.21
RAE1-203ENST00000395841 PROSER3Q2NL68 480 aa13.77□□□□□ -0.21
RAE1-203ENST00000395841 SKOR2Q2VWA4 1001 aaPredicted RBP13.77□□□□□ -0.21
RAE1-203ENST00000395841 NUTM1Q86Y26 1132 aa13.77□□□□□ -0.21
RAE1-203ENST00000395841 CWC22Q9HCG8 908 aaKnown RBP13.77□□□□□ -0.21
RAE1-203ENST00000395841 TNS3Q68CZ2 1445 aa13.77□□□□□ -0.21
RAE1-203ENST00000395841 GOLGA6L3A6NEY3 463 aa13.77□□□□□ -0.21
RAE1-203ENST00000395841 SSFA2P28290 1259 aa13.77□□□□□ -0.21
RAE1-203ENST00000395841 NUCB2P80303 420 aa13.77□□□□□ -0.21
RAE1-203ENST00000395841 UNC5CLQ8IV45 518 aa13.77□□□□□ -0.21
RAE1-203ENST00000395841 EPB41L2O43491 1005 aaKnown RBP13.76□□□□□ -0.21
RAE1-203ENST00000395841 ANAPC15P60006 121 aa13.76□□□□□ -0.21
RAE1-203ENST00000395841 PRAMEF22A3QJZ6 481 aa13.76□□□□□ -0.21
RAE1-203ENST00000395841 TATP17735 454 aaPredicted RBP13.76□□□□□ -0.21
RAE1-203ENST00000395841 PI4K2BQ8TCG2 481 aa13.76□□□□□ -0.21
RAE1-203ENST00000395841 DDX21Q9NR30 783 aaKnown RBP eCLIP13.76□□□□□ -0.21
RAE1-203ENST00000395841 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.76□□□□□ -0.217e-6■□□□□ 9.2
RAE1-203ENST00000395841 C9orf78Q9NZ63 289 aaPredicted RBP13.76□□□□□ -0.21
RAE1-203ENST00000395841 SPG7Q9UQ90 795 aa13.76□□□□□ -0.21
RAE1-203ENST00000395841 ABCC6O95255 1503 aa13.75□□□□□ -0.21
RAE1-203ENST00000395841 DDX58O95786 925 aaKnown RBP13.75□□□□□ -0.21
RAE1-203ENST00000395841 IL17RAQ96F46 866 aa13.75□□□□□ -0.21
RAE1-203ENST00000395841 ANO2Q9NQ90 1003 aa13.75□□□□□ -0.21
RAE1-203ENST00000395841 STRN4Q9NRL3 753 aa13.75□□□□□ -0.21
RAE1-203ENST00000395841 PLEKHG2Q9H7P9 1386 aa13.75□□□□□ -0.21
RAE1-203ENST00000395841 SLC52A2Q9HAB3 445 aa13.75□□□□□ -0.21
RAE1-203ENST00000395841 PRDM11Q9NQV5 511 aa13.75□□□□□ -0.21
RAE1-203ENST00000395841 KDM6AO15550 1401 aaPredicted RBP13.74□□□□□ -0.21
RAE1-203ENST00000395841 USP42Q9H9J4 1324 aaKnown RBP13.74□□□□□ -0.21
RAE1-203ENST00000395841 GOLGA6L22H0YM25 854 aa13.74□□□□□ -0.21
RAE1-203ENST00000395841 MCM2P49736 904 aa13.74□□□□□ -0.21
RAE1-203ENST00000395841 ZNF790Q6PG37 636 aa13.74□□□□□ -0.21
RAE1-203ENST00000395841 LINS1Q8NG48 757 aa13.74□□□□□ -0.21
RAE1-203ENST00000395841 CYP2E1P05181 493 aaPredicted RBP13.74□□□□□ -0.21
RAE1-203ENST00000395841 PHKG2P15735 406 aa13.74□□□□□ -0.21
RAE1-203ENST00000395841 BAG4O95429 457 aaKnown RBP13.73□□□□□ -0.21
RAE1-203ENST00000395841 NEK4P51957 841 aa13.73□□□□□ -0.21
RAE1-203ENST00000395841 PDIA6Q15084 440 aa13.73□□□□□ -0.21
RAE1-203ENST00000395841 UTYO14607 1347 aa13.73□□□□□ -0.21
RAE1-203ENST00000395841 TTC41PQ6P2S7 1318 aa13.73□□□□□ -0.21
RAE1-203ENST00000395841 OS9Q13438 667 aaPredicted RBP13.73□□□□□ -0.21
RAE1-203ENST00000395841 CWF19L2Q2TBE0 894 aaKnown RBP13.73□□□□□ -0.21
RAE1-203ENST00000395841 ISY1Q9ULR0 285 aaKnown RBP13.73□□□□□ -0.21
RAE1-203ENST00000395841 MEGF6O75095 1541 aa13.72□□□□□ -0.21
RAE1-203ENST00000395841 SLC39A6Q13433 755 aa13.72□□□□□ -0.21
RAE1-203ENST00000395841 ERC1Q8IUD2 1116 aa13.72□□□□□ -0.21
RAE1-203ENST00000395841 IFNL2Q8IZJ0 200 aa13.72□□□□□ -0.21
RAE1-203ENST00000395841 CNTROBQ8N137 903 aa13.72□□□□□ -0.21
RAE1-203ENST00000395841 PALD1Q9ULE6 856 aa13.72□□□□□ -0.21
RAE1-203ENST00000395841 SOS2Q07890 1332 aaPredicted RBP13.72□□□□□ -0.21
RAE1-203ENST00000395841 GRM8O00222 908 aa13.72□□□□□ -0.21
RAE1-203ENST00000395841 COL18A1P39060 1754 aa13.72□□□□□ -0.21
RAE1-203ENST00000395841 CLASRPQ8N2M8 674 aaKnown RBP13.71□□□□□ -0.21
RAE1-203ENST00000395841 ZGPATQ8N5A5 531 aaKnown RBP13.71□□□□□ -0.21
RAE1-203ENST00000395841 GLRX3O76003 335 aaKnown RBP13.71□□□□□ -0.22
RAE1-203ENST00000395841 XRCC6P12956 609 aaKnown RBP eCLIP13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms