RNA–Protein interactions for RNA: ENST00000394820.8

NFKB1-202, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NFKB1, Length 3,693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-202ENST00000394820 MED14O60244 1454 aa15.88■□□□□ 0.13
NFKB1-202ENST00000394820 FAM173BQ6P4H8 233 aa15.88■□□□□ 0.13
NFKB1-202ENST00000394820 ZNF530Q6P9A1 599 aaPredicted RBP15.88■□□□□ 0.13
NFKB1-202ENST00000394820 LGR6Q9HBX8 967 aa15.88■□□□□ 0.13
NFKB1-202ENST00000394820 CWC22Q9HCG8 908 aaKnown RBP15.88■□□□□ 0.13
NFKB1-202ENST00000394820 ADCY5O95622 1261 aa15.88■□□□□ 0.13
NFKB1-202ENST00000394820 CDK11BP21127 795 aaKnown RBP15.88■□□□□ 0.13
NFKB1-202ENST00000394820 LMBRD1Q9NUN5 540 aa15.88■□□□□ 0.13
NFKB1-202ENST00000394820 USP6P35125 1406 aa15.87■□□□□ 0.13
NFKB1-202ENST00000394820 OFD1O75665 1012 aa15.87■□□□□ 0.13
NFKB1-202ENST00000394820 TBX22Q9Y458 520 aa15.87■□□□□ 0.13
NFKB1-202ENST00000394820 USP32Q8NFA0 1604 aa15.87■□□□□ 0.13
NFKB1-202ENST00000394820 NECAB1Q8N987 351 aa15.87■□□□□ 0.13
NFKB1-202ENST00000394820 IL17REQ8NFR9 667 aa15.87■□□□□ 0.13
NFKB1-202ENST00000394820 SETD1BQ9UPS6 1966 aaKnown RBP15.87■□□□□ 0.13
NFKB1-202ENST00000394820 ADGRB2O60241 1585 aa15.87■□□□□ 0.13
NFKB1-202ENST00000394820 CDK12Q9NYV4 1490 aaPredicted RBP15.87■□□□□ 0.13
NFKB1-202ENST00000394820 FLT4P35916 1363 aa15.87■□□□□ 0.13
NFKB1-202ENST00000394820 KCNQ3O43525 872 aa15.87■□□□□ 0.13
NFKB1-202ENST00000394820 CSB-PGBD3P0DP91 1061 aa15.87■□□□□ 0.13
NFKB1-202ENST00000394820 SRGAP3O43295 1099 aa15.86■□□□□ 0.13
NFKB1-202ENST00000394820 USP48Q86UV5 1035 aa15.86■□□□□ 0.13
NFKB1-202ENST00000394820 PNMA6EA0A0J9YXQ4 647 aa15.86■□□□□ 0.13
NFKB1-202ENST00000394820 H3BQV1 296 aa15.86■□□□□ 0.13
NFKB1-202ENST00000394820 MX1P20591 662 aa15.86■□□□□ 0.13
NFKB1-202ENST00000394820 CASTP20810 708 aaKnown RBP15.86■□□□□ 0.13
NFKB1-202ENST00000394820 CCT4P50991 539 aaKnown RBP15.86■□□□□ 0.13
NFKB1-202ENST00000394820 TAF7Q15545 349 aaPredicted RBP15.86■□□□□ 0.13
NFKB1-202ENST00000394820 IFFO2Q5TF58 517 aa15.86■□□□□ 0.13
NFKB1-202ENST00000394820 ANKLE2Q86XL3 938 aa15.86■□□□□ 0.13
NFKB1-202ENST00000394820 GPT2Q8TD30 523 aa15.86■□□□□ 0.13
NFKB1-202ENST00000394820 ORAI2Q96SN7 254 aa15.86■□□□□ 0.13
NFKB1-202ENST00000394820 JAKMIP1Q96N16 626 aaKnown RBP15.85■□□□□ 0.13
NFKB1-202ENST00000394820 ADAMTS13Q76LX8 1427 aa15.85■□□□□ 0.13
NFKB1-202ENST00000394820 DDX11Q96FC9 970 aa15.85■□□□□ 0.13
NFKB1-202ENST00000394820 C16orf45Q96MC5 204 aaPredicted RBP15.85■□□□□ 0.13
NFKB1-202ENST00000394820 TRERF1Q96PN7 1200 aa15.85■□□□□ 0.13
NFKB1-202ENST00000394820 ZKSCAN5Q9Y2L8 839 aa15.85■□□□□ 0.13
NFKB1-202ENST00000394820 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.85■□□□□ 0.13
NFKB1-202ENST00000394820 BECN2A8MW95 431 aa15.84■□□□□ 0.13
NFKB1-202ENST00000394820 IFIT2P09913 472 aaKnown RBP15.84■□□□□ 0.13
NFKB1-202ENST00000394820 LRSAM1Q6UWE0 723 aa15.84■□□□□ 0.13
NFKB1-202ENST00000394820 SIRT1Q96EB6 747 aa15.84■□□□□ 0.13
NFKB1-202ENST00000394820 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.84■□□□□ 0.13
NFKB1-202ENST00000394820 V9GYY5 206 aaPredicted RBP15.84■□□□□ 0.13
NFKB1-202ENST00000394820 PIK3R4Q99570 1358 aa15.84■□□□□ 0.13
NFKB1-202ENST00000394820 C1orf141Q5JVX7 400 aa15.84■□□□□ 0.13
NFKB1-202ENST00000394820 GORABQ5T7V8 394 aa15.84■□□□□ 0.13
NFKB1-202ENST00000394820 FILIP1Q7Z7B0 1213 aa15.84■□□□□ 0.13
NFKB1-202ENST00000394820 PALD1Q9ULE6 856 aa15.84■□□□□ 0.13
NFKB1-202ENST00000394820 PTPRUQ92729 1446 aa15.84■□□□□ 0.13
NFKB1-202ENST00000394820 PDE1AP54750 535 aa15.84■□□□□ 0.13
NFKB1-202ENST00000394820 NBPF6Q5VWK0 638 aa15.84■□□□□ 0.13
NFKB1-202ENST00000394820 NBPF4Q96M43 638 aa15.84■□□□□ 0.13
NFKB1-202ENST00000394820 PTPRCP08575 1304 aa15.84■□□□□ 0.13
NFKB1-202ENST00000394820 TTC21AQ8NDW8 1320 aa15.84■□□□□ 0.13
NFKB1-202ENST00000394820 PPP4R3BQ5MIZ7 849 aa15.83■□□□□ 0.13
NFKB1-202ENST00000394820 GOLGA6L6A8MZA4 724 aa15.83■□□□□ 0.12
NFKB1-202ENST00000394820 PRPF40BQ6NWY9 871 aaKnown RBP15.83■□□□□ 0.12
NFKB1-202ENST00000394820 DDX17Q92841 729 aaKnown RBP15.83■□□□□ 0.12
NFKB1-202ENST00000394820 BRPF1P55201 1214 aaPredicted RBP15.83■□□□□ 0.12
NFKB1-202ENST00000394820 NLRP2Q9NX02 1062 aa15.83■□□□□ 0.12
NFKB1-202ENST00000394820 RTL1A6NKG5 1358 aa15.82■□□□□ 0.12
NFKB1-202ENST00000394820 GOLGA6L19H0YKK7 550 aa15.82■□□□□ 0.12
NFKB1-202ENST00000394820 GNAI3P08754 354 aa15.82■□□□□ 0.12
NFKB1-202ENST00000394820 CCAR2Q8N163 923 aaKnown RBP15.82■□□□□ 0.12
NFKB1-202ENST00000394820 CHPF2Q9P2E5 772 aa15.82■□□□□ 0.12
NFKB1-202ENST00000394820 PLEKHG1Q9ULL1 1385 aa15.82■□□□□ 0.12
NFKB1-202ENST00000394820 BTBD11A6QL63 1104 aa15.82■□□□□ 0.12
NFKB1-202ENST00000394820 PIP4K2AP48426 406 aaPredicted RBP15.82■□□□□ 0.12
NFKB1-202ENST00000394820 PI4KAP2A4QPH2 592 aa15.82■□□□□ 0.12
NFKB1-202ENST00000394820 CREBRFQ8IUR6 639 aa15.82■□□□□ 0.12
NFKB1-202ENST00000394820 PI4KAP1Q8N8J0 262 aa15.82■□□□□ 0.12
NFKB1-202ENST00000394820 SPATA31D1Q6ZQQ2 1576 aa15.82■□□□□ 0.12
NFKB1-202ENST00000394820 ZKSCAN1P17029 563 aaPredicted RBP15.81■□□□□ 0.12
NFKB1-202ENST00000394820 LARP1BQ659C4 914 aaKnown RBP15.81■□□□□ 0.12
NFKB1-202ENST00000394820 SASS6Q6UVJ0 657 aa15.81■□□□□ 0.12
NFKB1-202ENST00000394820 PROSER2Q86WR7 435 aaPredicted RBP15.81■□□□□ 0.12
NFKB1-202ENST00000394820 FAM184AQ8NB25 1140 aa15.81■□□□□ 0.12
NFKB1-202ENST00000394820 SBNO1A3KN83 1393 aa15.81■□□□□ 0.12
NFKB1-202ENST00000394820 TPD52L1Q16890 204 aaPredicted RBP15.81■□□□□ 0.12
NFKB1-202ENST00000394820 WDR33Q9C0J8 1336 aaKnown RBP15.81■□□□□ 0.12
NFKB1-202ENST00000394820 PTCH1Q13635 1447 aa15.81■□□□□ 0.12
NFKB1-202ENST00000394820 KIF3AQ9Y496 699 aa15.81■□□□□ 0.12
NFKB1-202ENST00000394820 SRCIN1Q9C0H9 1055 aa15.8■□□□□ 0.12
NFKB1-202ENST00000394820 TRMT1Q9NXH9 659 aaKnown RBP15.8■□□□□ 0.12
NFKB1-202ENST00000394820 KIF2CQ99661 725 aa15.8■□□□□ 0.12
NFKB1-202ENST00000394820 ERICH4A6NGS2 130 aa15.8■□□□□ 0.12
NFKB1-202ENST00000394820 MYL6BP14649 208 aa15.8■□□□□ 0.12
NFKB1-202ENST00000394820 ATP6V1DQ9Y5K8 247 aa15.8■□□□□ 0.12
NFKB1-202ENST00000394820 AGLP35573 1532 aa15.79■□□□□ 0.12
NFKB1-202ENST00000394820 DNM1Q05193 864 aaKnown RBP15.79■□□□□ 0.12
NFKB1-202ENST00000394820 PODXL2Q9NZ53 605 aa15.79■□□□□ 0.12
NFKB1-202ENST00000394820 DLC1Q96QB1 1528 aa15.79■□□□□ 0.12
NFKB1-202ENST00000394820 PPP1R42Q7Z4L9 355 aa15.79■□□□□ 0.12
NFKB1-202ENST00000394820 GUCY1B3Q02153 619 aa15.79■□□□□ 0.12
NFKB1-202ENST00000394820 SLC39A6Q13433 755 aa15.79■□□□□ 0.12
NFKB1-202ENST00000394820 NOLC1Q14978 699 aaKnown RBP eCLIP15.79■□□□□ 0.12
NFKB1-202ENST00000394820 SF3A1Q15459 793 aaKnown RBP15.79■□□□□ 0.12
NFKB1-202ENST00000394820 FAM177A1Q8N128 213 aaPredicted RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms