RNA–Protein interactions for RNA: ENST00000394752.7

SFMBT1-201, Transcript of Scm like with four mbt domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFMBT1, Length 4,548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFMBT1-201ENST00000394752 ZNF592Q92610 1267 aa17.59■□□□□ 0.41
SFMBT1-201ENST00000394752 DNAAF4Q8WXU2 420 aa17.59■□□□□ 0.41
SFMBT1-201ENST00000394752 DCTPP1Q9H773 170 aa17.59■□□□□ 0.41
SFMBT1-201ENST00000394752 G2E3Q7L622 706 aa17.58■□□□□ 0.41
SFMBT1-201ENST00000394752 ORAI2Q96SN7 254 aa17.58■□□□□ 0.41
SFMBT1-201ENST00000394752 PRDM11Q9NQV5 511 aa17.58■□□□□ 0.41
SFMBT1-201ENST00000394752 CYP46A1Q9Y6A2 500 aa17.58■□□□□ 0.4
SFMBT1-201ENST00000394752 CABP4P57796 275 aa17.57■□□□□ 0.4
SFMBT1-201ENST00000394752 TOM1L2Q6ZVM7 507 aa17.57■□□□□ 0.4
SFMBT1-201ENST00000394752 KIAA0232Q92628 1395 aa17.57■□□□□ 0.4
SFMBT1-201ENST00000394752 USP32Q8NFA0 1604 aa17.57■□□□□ 0.4
SFMBT1-201ENST00000394752 CCDC173Q0VFZ6 552 aa17.57■□□□□ 0.4
SFMBT1-201ENST00000394752 DBF4Q9UBU7 674 aaPredicted RBP17.57■□□□□ 0.4
SFMBT1-201ENST00000394752 OTUD7AQ8TE49 926 aaPredicted RBP17.57■□□□□ 0.4
SFMBT1-201ENST00000394752 TSPY26PQ9H489 355 aa17.57■□□□□ 0.4
SFMBT1-201ENST00000394752 BRPF1P55201 1214 aaPredicted RBP17.56■□□□□ 0.4
SFMBT1-201ENST00000394752 AKAP4Q5JQC9 854 aa17.56■□□□□ 0.4
SFMBT1-201ENST00000394752 FAM177BA6PVY3 158 aa17.56■□□□□ 0.4
SFMBT1-201ENST00000394752 XRCC6P12956 609 aaKnown RBP eCLIP17.56■□□□□ 0.4
SFMBT1-201ENST00000394752 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.56■□□□□ 0.4
SFMBT1-201ENST00000394752 STRN4Q9NRL3 753 aa17.56■□□□□ 0.4
SFMBT1-201ENST00000394752 PI4KAP2A4QPH2 592 aa17.56■□□□□ 0.4
SFMBT1-201ENST00000394752 CASTP20810 708 aaKnown RBP17.56■□□□□ 0.4
SFMBT1-201ENST00000394752 PI4KAP1Q8N8J0 262 aa17.56■□□□□ 0.4
SFMBT1-201ENST00000394752 KIF1BPQ96EK5 621 aa17.56■□□□□ 0.4
SFMBT1-201ENST00000394752 WDR33Q9C0J8 1336 aaKnown RBP17.56■□□□□ 0.4
SFMBT1-201ENST00000394752 BAG4O95429 457 aaKnown RBP17.55■□□□□ 0.4
SFMBT1-201ENST00000394752 PSMA5P28066 241 aa17.55■□□□□ 0.4
SFMBT1-201ENST00000394752 CCDC85AQ96PX6 553 aaPredicted RBP17.55■□□□□ 0.4
SFMBT1-201ENST00000394752 C19orf44Q9H6X5 657 aa17.55■□□□□ 0.4
SFMBT1-201ENST00000394752 CHPF2Q9P2E5 772 aa17.55■□□□□ 0.4
SFMBT1-201ENST00000394752 CD163L1Q9NR16 1453 aa17.55■□□□□ 0.4
SFMBT1-201ENST00000394752 ERC1Q8IUD2 1116 aa17.55■□□□□ 0.4
SFMBT1-201ENST00000394752 CCDC8Q9H0W5 538 aaPredicted RBP17.55■□□□□ 0.4
SFMBT1-201ENST00000394752 BOLA2Q9H3K6 86 aa17.55■□□□□ 0.4
SFMBT1-201ENST00000394752 CDC42BPGQ6DT37 1551 aa17.55■□□□□ 0.4
SFMBT1-201ENST00000394752 ADAMTS13Q76LX8 1427 aa17.54■□□□□ 0.4
SFMBT1-201ENST00000394752 LARP1BQ659C4 914 aaKnown RBP17.54■□□□□ 0.4
SFMBT1-201ENST00000394752 SASS6Q6UVJ0 657 aa17.54■□□□□ 0.4
SFMBT1-201ENST00000394752 PPP1R42Q7Z4L9 355 aa17.54■□□□□ 0.4
SFMBT1-201ENST00000394752 SPC24Q8NBT2 197 aa17.54■□□□□ 0.4
SFMBT1-201ENST00000394752 RBM10P98175 930 aaKnown RBP17.54■□□□□ 0.4
SFMBT1-201ENST00000394752 PRPF40BQ6NWY9 871 aaKnown RBP17.54■□□□□ 0.4
SFMBT1-201ENST00000394752 CADPS2Q86UW7 1296 aa17.53■□□□□ 0.4
SFMBT1-201ENST00000394752 CCDC83Q8IWF9 413 aa17.53■□□□□ 0.4
SFMBT1-201ENST00000394752 IGSF1Q8N6C5 1336 aa17.53■□□□□ 0.4
SFMBT1-201ENST00000394752 RBM27Q9P2N5 1060 aaKnown RBP17.53■□□□□ 0.4
SFMBT1-201ENST00000394752 TPM4P67936 248 aa17.53■□□□□ 0.4
SFMBT1-201ENST00000394752 NBPF6Q5VWK0 638 aa17.53■□□□□ 0.4
SFMBT1-201ENST00000394752 NBPF4Q96M43 638 aa17.53■□□□□ 0.4
SFMBT1-201ENST00000394752 CPS1P31327 1500 aa17.52■□□□□ 0.4
SFMBT1-201ENST00000394752 MYO5BQ9ULV0 1848 aa17.52■□□□□ 0.4
SFMBT1-201ENST00000394752 RAB11FIP3O75154 756 aa17.52■□□□□ 0.4
SFMBT1-201ENST00000394752 PDE1AP54750 535 aa17.52■□□□□ 0.4
SFMBT1-201ENST00000394752 CHRNA2Q15822 529 aa17.52■□□□□ 0.4
SFMBT1-201ENST00000394752 TRDNQ13061 729 aa17.52■□□□□ 0.4
SFMBT1-201ENST00000394752 PLEKHM2Q8IWE5 1019 aa17.52■□□□□ 0.4
SFMBT1-201ENST00000394752 JARID2Q92833 1246 aaPredicted RBP17.52■□□□□ 0.4
SFMBT1-201ENST00000394752 BLOC1S2Q6QNY1 142 aa17.52■□□□□ 0.39
SFMBT1-201ENST00000394752 PDRG1Q9NUG6 133 aa17.52■□□□□ 0.39
SFMBT1-201ENST00000394752 CDK11BP21127 795 aaKnown RBP17.51■□□□□ 0.39
SFMBT1-201ENST00000394752 CCDC73Q6ZRK6 1079 aa17.51■□□□□ 0.39
SFMBT1-201ENST00000394752 RALYLQ86SE5 291 aaKnown RBP17.51■□□□□ 0.39
SFMBT1-201ENST00000394752 TECPR2O15040 1411 aa17.51■□□□□ 0.39
SFMBT1-201ENST00000394752 CPLX2Q6PUV4 134 aaKnown RBP17.51■□□□□ 0.39
SFMBT1-201ENST00000394752 SDF4Q9BRK5 362 aa17.51■□□□□ 0.39
SFMBT1-201ENST00000394752 REREQ9P2R6 1566 aa17.51■□□□□ 0.39
SFMBT1-201ENST00000394752 HYPKQ9NX55 129 aa17.51■□□□□ 0.39
SFMBT1-201ENST00000394752 CCDC39Q9UFE4 941 aa17.51■□□□□ 0.39
SFMBT1-201ENST00000394752 MAP3K2Q9Y2U5 619 aa17.51■□□□□ 0.39
SFMBT1-201ENST00000394752 PTCD1O75127 700 aaKnown RBP17.5■□□□□ 0.39
SFMBT1-201ENST00000394752 GLRX3O76003 335 aaKnown RBP17.5■□□□□ 0.39
SFMBT1-201ENST00000394752 FMNL2Q96PY5 1086 aa17.5■□□□□ 0.39
SFMBT1-201ENST00000394752 SOS1Q07889 1333 aaPredicted RBP17.5■□□□□ 0.39
SFMBT1-201ENST00000394752 TRIM5Q9C035 493 aa17.5■□□□□ 0.39
SFMBT1-201ENST00000394752 PHAXQ9H814 394 aaKnown RBP17.5■□□□□ 0.39
SFMBT1-201ENST00000394752 BABAM1Q9NWV8 329 aa17.5■□□□□ 0.39
SFMBT1-201ENST00000394752 KIF24Q5T7B8 1368 aa17.5■□□□□ 0.39
SFMBT1-201ENST00000394752 PDCP20941 246 aa17.5■□□□□ 0.39
SFMBT1-201ENST00000394752 RASSF8Q8NHQ8 419 aa17.5■□□□□ 0.39
SFMBT1-201ENST00000394752 ATP8B2P98198 1209 aa17.49■□□□□ 0.39
SFMBT1-201ENST00000394752 LRRFIP1Q32MZ4 808 aaKnown RBP17.49■□□□□ 0.39
SFMBT1-201ENST00000394752 IL17REQ8NFR9 667 aa17.49■□□□□ 0.39
SFMBT1-201ENST00000394752 DDX11Q96FC9 970 aa17.49■□□□□ 0.39
SFMBT1-201ENST00000394752 LGR6Q9HBX8 967 aa17.49■□□□□ 0.39
SFMBT1-201ENST00000394752 NFXL1Q6ZNB6 911 aa17.49■□□□□ 0.39
SFMBT1-201ENST00000394752 ZGPATQ8N5A5 531 aaKnown RBP17.49■□□□□ 0.39
SFMBT1-201ENST00000394752 NPHP3Q7Z494 1330 aa17.49■□□□□ 0.39
SFMBT1-201ENST00000394752 COL3A1P02461 1466 aaPredicted RBP17.49■□□□□ 0.39
SFMBT1-201ENST00000394752 ANKARQ7Z5J8 1434 aa17.48■□□□□ 0.39
SFMBT1-201ENST00000394752 IFNL2Q8IZJ0 200 aa17.48■□□□□ 0.39
SFMBT1-201ENST00000394752 CABLES1Q8TDN4 633 aa17.48■□□□□ 0.39
SFMBT1-201ENST00000394752 TMX3Q96JJ7 454 aa17.48■□□□□ 0.39
SFMBT1-201ENST00000394752 LARP1Q6PKG0 1096 aaKnown RBP17.47■□□□□ 0.39
SFMBT1-201ENST00000394752 USP19O94966 1318 aa17.47■□□□□ 0.39
SFMBT1-201ENST00000394752 FKBP4Q02790 459 aaKnown RBP eCLIP17.47■□□□□ 0.39
SFMBT1-201ENST00000394752 PTCH1Q13635 1447 aa17.47■□□□□ 0.39
SFMBT1-201ENST00000394752 HIP1O00291 1037 aa17.47■□□□□ 0.39
SFMBT1-201ENST00000394752 RNMTO43148 476 aaKnown RBP17.47■□□□□ 0.39
SFMBT1-201ENST00000394752 PPFIA3O75145 1194 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms