RNA–Protein interactions for RNA: ENST00000393888.1

CNP-201, Transcript of 2',3'-cyclic nucleotide 3' phosphodiesterase, humanhuman

TSL 1 (best) BASIC

Gene CNP, Length 2,583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNP-201ENST00000393888 KIAA1524Q8TCG1 905 aa19.74■□□□□ 0.75
CNP-201ENST00000393888 CHMP3Q9Y3E7 222 aa19.74■□□□□ 0.75
CNP-201ENST00000393888 EDC4Q6P2E9 1401 aaKnown RBP19.74■□□□□ 0.75
CNP-201ENST00000393888 HSPA4P34932 840 aa19.74■□□□□ 0.75
CNP-201ENST00000393888 TMEM87AQ8NBN3 555 aa19.74■□□□□ 0.75
CNP-201ENST00000393888 TSPYL4Q9UJ04 414 aa19.74■□□□□ 0.75
CNP-201ENST00000393888 DNM1Q05193 864 aaKnown RBP19.73■□□□□ 0.75
CNP-201ENST00000393888 RASEFQ8IZ41 740 aa19.73■□□□□ 0.75
CNP-201ENST00000393888 LRRFIP2Q9Y608 721 aaKnown RBP19.73■□□□□ 0.75
CNP-201ENST00000393888 AATKQ6ZMQ8 1374 aa19.72■□□□□ 0.75
CNP-201ENST00000393888 LARGE1O95461 756 aa19.72■□□□□ 0.75
CNP-201ENST00000393888 BCL11BQ9C0K0 894 aaPredicted RBP19.72■□□□□ 0.75
CNP-201ENST00000393888 SNX14Q9Y5W7 946 aa19.72■□□□□ 0.75
CNP-201ENST00000393888 TUBGCP6Q96RT7 1819 aa19.72■□□□□ 0.75
CNP-201ENST00000393888 WASLO00401 505 aaPredicted RBP19.72■□□□□ 0.75
CNP-201ENST00000393888 F13A1P00488 732 aa19.72■□□□□ 0.75
CNP-201ENST00000393888 HSP90AB2PQ58FF8 381 aa19.72■□□□□ 0.75
CNP-201ENST00000393888 RUFY3Q7L099 469 aa19.72■□□□□ 0.75
CNP-201ENST00000393888 NUDT16Q96DE0 195 aaKnown RBP19.72■□□□□ 0.75
CNP-201ENST00000393888 FUCA2Q9BTY2 467 aa19.72■□□□□ 0.75
CNP-201ENST00000393888 LETM1O95202 739 aaPredicted RBP19.71■□□□□ 0.75
CNP-201ENST00000393888 ATP8B2P98198 1209 aa19.71■□□□□ 0.75
CNP-201ENST00000393888 SMC3Q9UQE7 1217 aa19.71■□□□□ 0.75
CNP-201ENST00000393888 TXNDC2Q86VQ3 553 aa19.7■□□□□ 0.74
CNP-201ENST00000393888 DDX54Q8TDD1 881 aaKnown RBP19.7■□□□□ 0.74
CNP-201ENST00000393888 PPP6R1Q9UPN7 881 aa19.7■□□□□ 0.74
CNP-201ENST00000393888 PLEKHG5O94827 1062 aa19.7■□□□□ 0.74
CNP-201ENST00000393888 CCDC83Q8IWF9 413 aa19.7■□□□□ 0.74
CNP-201ENST00000393888 SPG7Q9UQ90 795 aa19.7■□□□□ 0.74
CNP-201ENST00000393888 CHAF1AQ13111 956 aaPredicted RBP19.69■□□□□ 0.74
CNP-201ENST00000393888 STAP2Q9UGK3 403 aa19.69■□□□□ 0.74
CNP-201ENST00000393888 SSH2Q76I76 1423 aa19.69■□□□□ 0.74
CNP-201ENST00000393888 PTGS1P23219 599 aa19.69■□□□□ 0.74
CNP-201ENST00000393888 TTC14Q96N46 770 aa19.69■□□□□ 0.74
CNP-201ENST00000393888 CRB1P82279 1406 aa19.68■□□□□ 0.74
CNP-201ENST00000393888 CAMK4Q16566 473 aa19.68■□□□□ 0.74
CNP-201ENST00000393888 NUTM2FA1L443 756 aa19.68■□□□□ 0.74
CNP-201ENST00000393888 LIMCH1Q9UPQ0 1083 aa19.68■□□□□ 0.74
CNP-201ENST00000393888 GJB2P29033 226 aa19.67■□□□□ 0.74
CNP-201ENST00000393888 FLIIQ13045 1269 aa19.67■□□□□ 0.74
CNP-201ENST00000393888 CWC27Q6UX04 472 aaKnown RBP19.67■□□□□ 0.74
CNP-201ENST00000393888 STK31Q9BXU1 1019 aa19.67■□□□□ 0.74
CNP-201ENST00000393888 DIAPH3Q9NSV4 1193 aa19.67■□□□□ 0.74
CNP-201ENST00000393888 VPS37CA5D8V6 355 aaPredicted RBP19.67■□□□□ 0.74
CNP-201ENST00000393888 CASTP20810 708 aaKnown RBP19.67■□□□□ 0.74
CNP-201ENST00000393888 MTHFSDQ2M296 383 aaKnown RBP19.67■□□□□ 0.74
CNP-201ENST00000393888 GNAI3P08754 354 aa19.66■□□□□ 0.74
CNP-201ENST00000393888 RTF1Q92541 710 aaKnown RBP19.66■□□□□ 0.74
CNP-201ENST00000393888 GTPBP4Q9BZE4 634 aaKnown RBP19.66■□□□□ 0.74
CNP-201ENST00000393888 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.66■□□□□ 0.74
CNP-201ENST00000393888 IL17RAQ96F46 866 aa19.66■□□□□ 0.74
CNP-201ENST00000393888 PREX1Q8TCU6 1659 aa19.66■□□□□ 0.74
CNP-201ENST00000393888 RAD50Q92878 1312 aa19.65■□□□□ 0.74
CNP-201ENST00000393888 LRMPQ12912 555 aa19.65■□□□□ 0.74
CNP-201ENST00000393888 FAM173BQ6P4H8 233 aa19.65■□□□□ 0.74
CNP-201ENST00000393888 SGSM2O43147 1006 aa19.65■□□□□ 0.74
CNP-201ENST00000393888 LUZP1Q86V48 1076 aa19.65■□□□□ 0.74
CNP-201ENST00000393888 ANKRD7Q92527 254 aa19.65■□□□□ 0.74
CNP-201ENST00000393888 LSG1Q9H089 658 aaKnown RBP19.65■□□□□ 0.74
CNP-201ENST00000393888 SURF6O75683 361 aaKnown RBP19.64■□□□□ 0.73
CNP-201ENST00000393888 NAA30Q147X3 362 aaPredicted RBP19.64■□□□□ 0.73
CNP-201ENST00000393888 MTMR6Q9Y217 621 aa19.64■□□□□ 0.73
CNP-201ENST00000393888 CCDC61Q9Y6R9 512 aa19.64■□□□□ 0.73
CNP-201ENST00000393888 C16orf45Q96MC5 204 aaPredicted RBP19.64■□□□□ 0.73
CNP-201ENST00000393888 NRBP1Q9UHY1 535 aa19.64■□□□□ 0.73
CNP-201ENST00000393888 FERMT3Q86UX7 667 aa19.63■□□□□ 0.73
CNP-201ENST00000393888 NECAB1Q8N987 351 aa19.63■□□□□ 0.73
CNP-201ENST00000393888 ADCK5Q3MIX3 580 aa19.63■□□□□ 0.73
CNP-201ENST00000393888 CKAP2LQ8IYA6 745 aa19.63■□□□□ 0.73
CNP-201ENST00000393888 PI4K2BQ8TCG2 481 aa19.63■□□□□ 0.73
CNP-201ENST00000393888 ATP6V1DQ9Y5K8 247 aa19.63■□□□□ 0.73
CNP-201ENST00000393888 CCDC192P0DO97 292 aa19.62■□□□□ 0.73
CNP-201ENST00000393888 CCDC186Q7Z3E2 898 aa19.62■□□□□ 0.73
CNP-201ENST00000393888 DRC7Q8IY82 874 aa19.62■□□□□ 0.73
CNP-201ENST00000393888 USP44Q9H0E7 712 aa19.62■□□□□ 0.73
CNP-201ENST00000393888 FER1L4A9Z1Z3 1794 aa19.62■□□□□ 0.73
CNP-201ENST00000393888 RIMS1Q86UR5 1692 aaKnown RBP19.62■□□□□ 0.73
CNP-201ENST00000393888 GOLGA6L6A8MZA4 724 aa19.62■□□□□ 0.73
CNP-201ENST00000393888 HYPKQ9NX55 129 aa19.62■□□□□ 0.73
CNP-201ENST00000393888 MAP3K19Q56UN5 1328 aa19.62■□□□□ 0.73
CNP-201ENST00000393888 LIG1P18858 919 aa19.61■□□□□ 0.73
CNP-201ENST00000393888 CTIFO43310 598 aaKnown RBP19.61■□□□□ 0.73
CNP-201ENST00000393888 UBTFL1P0CB47 393 aaPredicted RBP19.61■□□□□ 0.73
CNP-201ENST00000393888 NCBP1Q09161 790 aaKnown RBP19.61■□□□□ 0.73
CNP-201ENST00000393888 PPP1R42Q7Z4L9 355 aa19.61■□□□□ 0.73
CNP-201ENST00000393888 JAKMIP1Q96N16 626 aaKnown RBP19.6■□□□□ 0.73
CNP-201ENST00000393888 PTH1RQ03431 593 aa19.6■□□□□ 0.73
CNP-201ENST00000393888 TTC6Q86TZ1 520 aa19.6■□□□□ 0.73
CNP-201ENST00000393888 MRVI1Q9Y6F6 885 aa19.6■□□□□ 0.73
CNP-201ENST00000393888 PRPF40BQ6NWY9 871 aaKnown RBP19.59■□□□□ 0.73
CNP-201ENST00000393888 RHPN1Q8TCX5 695 aa19.59■□□□□ 0.73
CNP-201ENST00000393888 PDRG1Q9NUG6 133 aa19.59■□□□□ 0.73
CNP-201ENST00000393888 SOS1Q07889 1333 aaPredicted RBP19.59■□□□□ 0.73
CNP-201ENST00000393888 PRR36Q9H6K5 1346 aa19.59■□□□□ 0.73
CNP-201ENST00000393888 ST3GAL1Q11201 340 aa19.59■□□□□ 0.73
CNP-201ENST00000393888 TPM3P06753 285 aa19.58■□□□□ 0.73
CNP-201ENST00000393888 TYRO3Q06418 890 aa19.58■□□□□ 0.73
CNP-201ENST00000393888 COL9A3Q14050 684 aaPredicted RBP19.58■□□□□ 0.73
CNP-201ENST00000393888 KIF20AO95235 890 aa19.58■□□□□ 0.72
CNP-201ENST00000393888 CCDC30Q5VVM6 783 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms