RNA–Protein interactions for RNA: ENST00000393196.7

NME1-203, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NME1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-203ENST00000393196 NGEFQ8N5V2 710 aa24.48■■□□□ 1.51
NME1-203ENST00000393196 DLG5Q8TDM6 1919 aa24.48■■□□□ 1.51
NME1-203ENST00000393196 SOS1Q07889 1333 aaPredicted RBP24.46■■□□□ 1.51
NME1-203ENST00000393196 A0A087WZG4 1122 aa24.46■■□□□ 1.51
NME1-203ENST00000393196 CCDC27Q2M243 656 aa24.46■■□□□ 1.51
NME1-203ENST00000393196 DIEXFQ68CQ4 756 aaKnown RBP24.46■■□□□ 1.51
NME1-203ENST00000393196 SGIP1Q9BQI5 828 aa24.46■■□□□ 1.51
NME1-203ENST00000393196 MIS18AQ9NYP9 233 aa24.46■■□□□ 1.51
NME1-203ENST00000393196 UBR3Q6ZT12 1888 aa24.46■■□□□ 1.51
NME1-203ENST00000393196 TUBGCP6Q96RT7 1819 aa24.45■■□□□ 1.5
NME1-203ENST00000393196 AMIGO3Q86WK7 504 aa24.45■■□□□ 1.5
NME1-203ENST00000393196 ARHGEF1Q92888 912 aaKnown RBP24.45■■□□□ 1.5
NME1-203ENST00000393196 EIF4A1P60842 406 aaKnown RBP24.44■■□□□ 1.5
NME1-203ENST00000393196 NLGN1Q8N2Q7 840 aa24.44■■□□□ 1.5
NME1-203ENST00000393196 ARXQ96QS3 562 aa24.44■■□□□ 1.5
NME1-203ENST00000393196 CHL1O00533 1208 aa24.43■■□□□ 1.5
NME1-203ENST00000393196 IL6STP40189 918 aaPredicted RBP24.43■■□□□ 1.5
NME1-203ENST00000393196 FAM9BQ8IZU0 186 aa24.43■■□□□ 1.5
NME1-203ENST00000393196 CFAP44Q96MT7 982 aa24.43■■□□□ 1.5
NME1-203ENST00000393196 ZBTB1Q9Y2K1 713 aa24.43■■□□□ 1.5
NME1-203ENST00000393196 ZPR1O75312 459 aa24.42■■□□□ 1.5
NME1-203ENST00000393196 GNAI1P63096 354 aa24.42■■□□□ 1.5
NME1-203ENST00000393196 IFT57Q9NWB7 429 aa24.42■■□□□ 1.5
NME1-203ENST00000393196 COL15A1P39059 1388 aa24.42■■□□□ 1.5
NME1-203ENST00000393196 GIGYF1O75420 1035 aaPredicted RBP24.41■■□□□ 1.5
NME1-203ENST00000393196 CANXP27824 592 aaKnown RBP24.41■■□□□ 1.5
NME1-203ENST00000393196 USP42Q9H9J4 1324 aaKnown RBP24.4■■□□□ 1.5
NME1-203ENST00000393196 EIF5P55010 431 aaKnown RBP24.4■■□□□ 1.5
NME1-203ENST00000393196 KDM3BQ7LBC6 1761 aa24.39■■□□□ 1.5
NME1-203ENST00000393196 MSL1Q68DK7 614 aa24.39■■□□□ 1.49
NME1-203ENST00000393196 LAS1LQ9Y4W2 734 aaKnown RBP24.39■■□□□ 1.49
NME1-203ENST00000393196 USP16Q9Y5T5 823 aa24.39■■□□□ 1.49
NME1-203ENST00000393196 ERBB4Q15303 1308 aa24.38■■□□□ 1.49
NME1-203ENST00000393196 SMIM5Q71RC9 77 aa24.38■■□□□ 1.49
NME1-203ENST00000393196 NARFQ9UHQ1 456 aa24.38■■□□□ 1.49
NME1-203ENST00000393196 MYH14Q7Z406 1995 aaKnown RBP24.37■■□□□ 1.49
NME1-203ENST00000393196 A1BGP04217 495 aa24.37■■□□□ 1.49
NME1-203ENST00000393196 GYS1P13807 737 aa24.37■■□□□ 1.49
NME1-203ENST00000393196 CHMP4AQ9BY43 222 aa24.37■■□□□ 1.49
NME1-203ENST00000393196 IL16Q14005 1332 aa24.36■■□□□ 1.49
NME1-203ENST00000393196 HOXB7P09629 217 aa24.36■■□□□ 1.49
NME1-203ENST00000393196 WWC1Q8IX03 1113 aa24.36■■□□□ 1.49
NME1-203ENST00000393196 COL24A1Q17RW2 1714 aa24.35■■□□□ 1.49
NME1-203ENST00000393196 ZNF853P0CG23 659 aa24.35■■□□□ 1.49
NME1-203ENST00000393196 PRAMEF22A3QJZ6 481 aa24.33■■□□□ 1.49
NME1-203ENST00000393196 RGL2O15211 777 aa24.33■■□□□ 1.49
NME1-203ENST00000393196 MMP10P09238 476 aa24.33■■□□□ 1.49
NME1-203ENST00000393196 ZNF330Q9Y3S2 320 aaPredicted RBP24.33■■□□□ 1.49
NME1-203ENST00000393196 WDR63Q8IWG1 891 aa24.32■■□□□ 1.48
NME1-203ENST00000393196 FHDC1Q9C0D6 1143 aaPredicted RBP24.32■■□□□ 1.48
NME1-203ENST00000393196 SRP68Q9UHB9 627 aaKnown RBP24.32■■□□□ 1.48
NME1-203ENST00000393196 USPL1Q5W0Q7 1092 aa24.31■■□□□ 1.48
NME1-203ENST00000393196 MBIPQ9NS73 344 aa24.31■■□□□ 1.48
NME1-203ENST00000393196 CD2APQ9Y5K6 639 aa24.31■■□□□ 1.48
NME1-203ENST00000393196 PARP3Q9Y6F1 533 aa24.31■■□□□ 1.48
NME1-203ENST00000393196 DCAF8L1A6NGE4 600 aa24.3■■□□□ 1.48
NME1-203ENST00000393196 ZNF652Q9Y2D9 606 aa24.3■■□□□ 1.48
NME1-203ENST00000393196 NBPF26B4DH59 902 aa24.29■■□□□ 1.48
NME1-203ENST00000393196 FKBP8Q14318 412 aa24.29■■□□□ 1.48
NME1-203ENST00000393196 NBPF10Q6P3W6 841 aaKnown RBP24.29■■□□□ 1.48
NME1-203ENST00000393196 DZIP3Q86Y13 1208 aaKnown RBP24.29■■□□□ 1.48
NME1-203ENST00000393196 NBPF15Q8N660 670 aa24.29■■□□□ 1.48
NME1-203ENST00000393196 SYT17Q9BSW7 474 aa24.29■■□□□ 1.48
NME1-203ENST00000393196 LAMB4A4D0S4 1761 aa24.29■■□□□ 1.48
NME1-203ENST00000393196 C4AP0C0L4 1744 aa24.27■■□□□ 1.48
NME1-203ENST00000393196 CLEC4GQ6UXB4 293 aa24.27■■□□□ 1.48
NME1-203ENST00000393196 EIF2S2P20042 333 aaKnown RBP24.26■■□□□ 1.47
NME1-203ENST00000393196 KLHL34Q8N239 644 aa24.26■■□□□ 1.47
NME1-203ENST00000393196 TBC1D2BQ9UPU7 963 aa24.26■■□□□ 1.47
NME1-203ENST00000393196 CAMTA2O94983 1202 aa24.25■■□□□ 1.47
NME1-203ENST00000393196 TM4SF1P30408 202 aa24.25■■□□□ 1.47
NME1-203ENST00000393196 HDGFL1Q5TGJ6 251 aa24.25■■□□□ 1.47
NME1-203ENST00000393196 DUSP27Q5VZP5 1158 aa24.25■■□□□ 1.47
NME1-203ENST00000393196 KIF6Q6ZMV9 814 aa24.25■■□□□ 1.47
NME1-203ENST00000393196 PIP4K2AP48426 406 aaPredicted RBP24.23■■□□□ 1.47
NME1-203ENST00000393196 MIER1Q8N108 512 aa24.23■■□□□ 1.47
NME1-203ENST00000393196 MYH16Q9H6N6 1097 aa24.23■■□□□ 1.47
NME1-203ENST00000393196 BCL2L12Q9HB09 334 aa24.23■■□□□ 1.47
NME1-203ENST00000393196 DDX21Q9NR30 783 aaKnown RBP eCLIP24.23■■□□□ 1.47
NME1-203ENST00000393196 SALL2Q9Y467 1007 aaPredicted RBP24.23■■□□□ 1.47
NME1-203ENST00000393196 ERVV-1B6SEH8 477 aa24.22■■□□□ 1.47
NME1-203ENST00000393196 MYL6BP14649 208 aa24.21■■□□□ 1.47
NME1-203ENST00000393196 NFIXQ14938 502 aa24.21■■□□□ 1.47
NME1-203ENST00000393196 DBF4Q9UBU7 674 aaPredicted RBP24.21■■□□□ 1.47
NME1-203ENST00000393196 POLRMTO00411 1230 aaKnown RBP24.2■■□□□ 1.46
NME1-203ENST00000393196 DDR1Q08345 913 aa24.2■■□□□ 1.46
NME1-203ENST00000393196 KRT24Q2M2I5 525 aa24.2■■□□□ 1.46
NME1-203ENST00000393196 SETDB2Q96T68 719 aa24.2■■□□□ 1.46
NME1-203ENST00000393196 CARMIL3Q8ND23 1372 aa24.19■■□□□ 1.46
NME1-203ENST00000393196 MAP3K15Q6ZN16 1313 aa24.19■■□□□ 1.46
NME1-203ENST00000393196 SCN7AQ01118 1682 aa24.19■■□□□ 1.46
NME1-203ENST00000393196 GOLGA2Q08379 1002 aa24.19■■□□□ 1.46
NME1-203ENST00000393196 HYPKQ9NX55 129 aa24.19■■□□□ 1.46
NME1-203ENST00000393196 C10orf71Q711Q0 1435 aa24.18■■□□□ 1.46
NME1-203ENST00000393196 TGFB2P61812 414 aa24.18■■□□□ 1.46
NME1-203ENST00000393196 PDIA6Q15084 440 aa24.18■■□□□ 1.46
NME1-203ENST00000393196 SENP3-EIF4A1A0A087X0R7 540 aa24.17■■□□□ 1.46
NME1-203ENST00000393196 CCDC30Q5VVM6 783 aa24.17■■□□□ 1.46
NME1-203ENST00000393196 TSR2Q969E8 191 aaKnown RBP24.17■■□□□ 1.46
NME1-203ENST00000393196 FANCIQ9NVI1 1328 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 155 ms