RNA–Protein interactions for RNA: ENST00000392399.3

UBBP1-201, Transcript of ubiquitin B pseudogene 1, humanhuman

BASIC

Gene UBBP1, Length 473 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBBP1-201ENST00000392399 DLG5Q8TDM6 1919 aa8.82□□□□□ -1
UBBP1-201ENST00000392399 ZNF831Q5JPB2 1677 aa8.81□□□□□ -1
UBBP1-201ENST00000392399 CNTNAP4Q9C0A0 1308 aa8.81□□□□□ -1
UBBP1-201ENST00000392399 ZNF853P0CG23 659 aa8.81□□□□□ -1
UBBP1-201ENST00000392399 KCNQ4P56696 695 aa8.81□□□□□ -1
UBBP1-201ENST00000392399 EIF4A1P60842 406 aaKnown RBP8.81□□□□□ -1
UBBP1-201ENST00000392399 R3HDM1Q15032 1099 aaKnown RBP8.81□□□□□ -1
UBBP1-201ENST00000392399 LINC00116Q8NCU8 138 aa8.81□□□□□ -1
UBBP1-201ENST00000392399 SLC16A10Q8TF71 515 aa8.81□□□□□ -1
UBBP1-201ENST00000392399 AK7Q96M32 723 aa8.81□□□□□ -1
UBBP1-201ENST00000392399 CHMP4AQ9BY43 222 aa8.81□□□□□ -1
UBBP1-201ENST00000392399 ANO8Q9HCE9 1232 aaPredicted RBP8.81□□□□□ -1
UBBP1-201ENST00000392399 MIS18AQ9NYP9 233 aa8.81□□□□□ -1
UBBP1-201ENST00000392399 VIRMAQ69YN4 1812 aaKnown RBP8.8□□□□□ -1
UBBP1-201ENST00000392399 KCNQ3O43525 872 aa8.8□□□□□ -1
UBBP1-201ENST00000392399 GIGYF1O75420 1035 aaPredicted RBP8.8□□□□□ -1
UBBP1-201ENST00000392399 RPS6KA4O75676 772 aa8.8□□□□□ -1
UBBP1-201ENST00000392399 CYP19A1P11511 503 aaPredicted RBP8.8□□□□□ -1
UBBP1-201ENST00000392399 SSFA2P28290 1259 aa8.8□□□□□ -1
UBBP1-201ENST00000392399 ZNF827Q17R98 1081 aa8.8□□□□□ -1
UBBP1-201ENST00000392399 DNAJC10Q8IXB1 793 aa8.8□□□□□ -1
UBBP1-201ENST00000392399 RTCBQ9Y3I0 505 aaKnown RBP8.8□□□□□ -1
UBBP1-201ENST00000392399 LAS1LQ9Y4W2 734 aaKnown RBP8.8□□□□□ -1
UBBP1-201ENST00000392399 SIPA1L3O60292 1781 aaPredicted RBP8.8□□□□□ -1
UBBP1-201ENST00000392399 NUP188Q5SRE5 1749 aa8.8□□□□□ -1
UBBP1-201ENST00000392399 KCPQ6ZWJ8 1503 aa8.8□□□□□ -1
UBBP1-201ENST00000392399 CRKLP46109 303 aaKnown RBP8.79□□□□□ -1
UBBP1-201ENST00000392399 TRAPPC3LQ5T215 181 aa8.79□□□□□ -1
UBBP1-201ENST00000392399 SPDYE1Q8NFV5 336 aaPredicted RBP8.79□□□□□ -1
UBBP1-201ENST00000392399 CCDC87Q9NVE4 849 aa8.79□□□□□ -1
UBBP1-201ENST00000392399 PAPPAQ13219 1627 aa8.79□□□□□ -1
UBBP1-201ENST00000392399 SOS1Q07889 1333 aaPredicted RBP8.79□□□□□ -1
UBBP1-201ENST00000392399 SRCAPQ6ZRS2 3230 aa8.78□□□□□ -1
UBBP1-201ENST00000392399 PSDA5PKW4 1024 aaPredicted RBP8.78□□□□□ -1
UBBP1-201ENST00000392399 GNPATO15228 680 aa8.78□□□□□ -1
UBBP1-201ENST00000392399 HOXB7P09629 217 aa8.78□□□□□ -1
UBBP1-201ENST00000392399 INTS5Q6P9B9 1019 aaKnown RBP8.78□□□□□ -1
UBBP1-201ENST00000392399 NPM2Q86SE8 214 aaKnown RBP8.78□□□□□ -1
UBBP1-201ENST00000392399 MBIPQ9NS73 344 aa8.78□□□□□ -1
UBBP1-201ENST00000392399 SALL2Q9Y467 1007 aaPredicted RBP8.78□□□□□ -1
UBBP1-201ENST00000392399 USP16Q9Y5T5 823 aa8.78□□□□□ -1
UBBP1-201ENST00000392399 PNPLA7Q6ZV29 1317 aa8.78□□□□□ -1
UBBP1-201ENST00000392399 ZNF521Q96K83 1311 aa8.78□□□□□ -1
UBBP1-201ENST00000392399 CICQ96RK0 1608 aaPredicted RBP8.77□□□□□ -1.01
UBBP1-201ENST00000392399 UBR2Q8IWV8 1755 aa8.77□□□□□ -1.01
UBBP1-201ENST00000392399 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.77□□□□□ -1.01
UBBP1-201ENST00000392399 IL6STP40189 918 aaPredicted RBP8.77□□□□□ -1.01
UBBP1-201ENST00000392399 COL23A1Q86Y22 540 aaPredicted RBP8.77□□□□□ -1.01
UBBP1-201ENST00000392399 MYH16Q9H6N6 1097 aa8.77□□□□□ -1.01
UBBP1-201ENST00000392399 C5P01031 1676 aa8.77□□□□□ -1.01
UBBP1-201ENST00000392399 TAF1LQ8IZX4 1826 aa8.77□□□□□ -1.01
UBBP1-201ENST00000392399 ERBB4Q15303 1308 aa8.77□□□□□ -1.01
UBBP1-201ENST00000392399 C4BP0C0L5 1744 aa8.77□□□□□ -1.01
UBBP1-201ENST00000392399 A0A087WZG4 1122 aa8.76□□□□□ -1.01
UBBP1-201ENST00000392399 RFC4P35249 363 aa8.76□□□□□ -1.01
UBBP1-201ENST00000392399 EIF5P55010 431 aaKnown RBP8.76□□□□□ -1.01
UBBP1-201ENST00000392399 GOLGA2Q08379 1002 aa8.76□□□□□ -1.01
UBBP1-201ENST00000392399 ARHGEF1Q92888 912 aaKnown RBP8.76□□□□□ -1.01
UBBP1-201ENST00000392399 MTFR1LQ9H019 292 aa8.76□□□□□ -1.01
UBBP1-201ENST00000392399 ZBTB1Q9Y2K1 713 aa8.76□□□□□ -1.01
UBBP1-201ENST00000392399 PRAMEF22A3QJZ6 481 aa8.75□□□□□ -1.01
UBBP1-201ENST00000392399 E9PSI1 815 aa8.75□□□□□ -1.01
UBBP1-201ENST00000392399 PHF14O94880 888 aa8.75□□□□□ -1.01
UBBP1-201ENST00000392399 A1BGP04217 495 aa8.75□□□□□ -1.01
UBBP1-201ENST00000392399 CANXP27824 592 aaKnown RBP8.75□□□□□ -1.01
UBBP1-201ENST00000392399 NLGN1Q8N2Q7 840 aa8.75□□□□□ -1.01
UBBP1-201ENST00000392399 SPON1Q9HCB6 807 aa8.75□□□□□ -1.01
UBBP1-201ENST00000392399 KDM3BQ7LBC6 1761 aa8.75□□□□□ -1.01
UBBP1-201ENST00000392399 COL5A3P25940 1745 aaPredicted RBP8.74□□□□□ -1.01
UBBP1-201ENST00000392399 QSER1Q2KHR3 1735 aa8.74□□□□□ -1.01
UBBP1-201ENST00000392399 SENP3-EIF4A1A0A087X0R7 540 aa8.74□□□□□ -1.01
UBBP1-201ENST00000392399 RGL2O15211 777 aa8.74□□□□□ -1.01
UBBP1-201ENST00000392399 ZPR1O75312 459 aa8.74□□□□□ -1.01
UBBP1-201ENST00000392399 EIF2S2P20042 333 aaKnown RBP8.74□□□□□ -1.01
UBBP1-201ENST00000392399 DUSP27Q5VZP5 1158 aa8.74□□□□□ -1.01
UBBP1-201ENST00000392399 NARFQ9UHQ1 456 aa8.74□□□□□ -1.01
UBBP1-201ENST00000392399 CLEC11AQ9Y240 323 aa8.74□□□□□ -1.01
UBBP1-201ENST00000392399 TJP1Q07157 1748 aa8.74□□□□□ -1.01
UBBP1-201ENST00000392399 MYH14Q7Z406 1995 aaKnown RBP8.73□□□□□ -1.01
UBBP1-201ENST00000392399 POLD1P28340 1107 aa8.73□□□□□ -1.01
UBBP1-201ENST00000392399 HNRNPUQ00839 825 aaKnown RBP eCLIP8.73□□□□□ -1.01
UBBP1-201ENST00000392399 SLFN5Q08AF3 891 aa8.73□□□□□ -1.01
UBBP1-201ENST00000392399 HDGFL1Q5TGJ6 251 aa8.73□□□□□ -1.01
UBBP1-201ENST00000392399 CCDC30Q5VVM6 783 aa8.73□□□□□ -1.01
UBBP1-201ENST00000392399 AMIGO3Q86WK7 504 aa8.73□□□□□ -1.01
UBBP1-201ENST00000392399 C8orf58Q8NAV2 365 aa8.73□□□□□ -1.01
UBBP1-201ENST00000392399 TSR2Q969E8 191 aaKnown RBP8.73□□□□□ -1.01
UBBP1-201ENST00000392399 PDGFDQ9GZP0 370 aaPredicted RBP8.73□□□□□ -1.01
UBBP1-201ENST00000392399 DDX21Q9NR30 783 aaKnown RBP eCLIP8.73□□□□□ -1.01
UBBP1-201ENST00000392399 DBF4Q9UBU7 674 aaPredicted RBP8.73□□□□□ -1.01
UBBP1-201ENST00000392399 FANCIQ9NVI1 1328 aa8.73□□□□□ -1.01
UBBP1-201ENST00000392399 COL15A1P39059 1388 aa8.73□□□□□ -1.01
UBBP1-201ENST00000392399 UBR3Q6ZT12 1888 aa8.72□□□□□ -1.01
UBBP1-201ENST00000392399 NBPF26B4DH59 902 aa8.72□□□□□ -1.01
UBBP1-201ENST00000392399 ELL2O00472 640 aaPredicted RBP8.72□□□□□ -1.01
UBBP1-201ENST00000392399 ZBTB7AO95365 584 aa8.72□□□□□ -1.01
UBBP1-201ENST00000392399 GYS1P13807 737 aa8.72□□□□□ -1.01
UBBP1-201ENST00000392399 KRT24Q2M2I5 525 aa8.72□□□□□ -1.01
UBBP1-201ENST00000392399 TWISTNBQ3B726 338 aaPredicted RBP8.72□□□□□ -1.01
UBBP1-201ENST00000392399 NBPF10Q6P3W6 841 aaKnown RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms