RNA–Protein interactions for RNA: ENST00000391611.6

PCNX4-202, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 4,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-202ENST00000391611 TRMT2AQ8IZ69 625 aaKnown RBP15.28■□□□□ 0.04
PCNX4-202ENST00000391611 DBF4Q9UBU7 674 aaPredicted RBP15.28■□□□□ 0.04
PCNX4-202ENST00000391611 ZNF521Q96K83 1311 aa15.28■□□□□ 0.04
PCNX4-202ENST00000391611 ZSCAN22P10073 491 aaPredicted RBP15.28■□□□□ 0.04
PCNX4-202ENST00000391611 PA2G4Q9UQ80 394 aaKnown RBP15.28■□□□□ 0.04
PCNX4-202ENST00000391611 SPDYE4A6NLX3 237 aa15.27■□□□□ 0.04
PCNX4-202ENST00000391611 ATP8B2P98198 1209 aa15.27■□□□□ 0.04
PCNX4-202ENST00000391611 CCDC57Q2TAC2 916 aa15.27■□□□□ 0.04
PCNX4-202ENST00000391611 ZKSCAN5Q9Y2L8 839 aa15.27■□□□□ 0.04
PCNX4-202ENST00000391611 ZNF165P49910 485 aa15.27■□□□□ 0.03
PCNX4-202ENST00000391611 SKIDA1Q1XH10 827 aa15.27■□□□□ 0.03
PCNX4-202ENST00000391611 RAB11FIP4Q86YS3 637 aa15.27■□□□□ 0.03
PCNX4-202ENST00000391611 TTC21BQ7Z4L5 1316 aa15.27■□□□□ 0.03
PCNX4-202ENST00000391611 ATP5J2-PTCD1G3V325 749 aa15.27■□□□□ 0.03
PCNX4-202ENST00000391611 CHPF2Q9P2E5 772 aa15.27■□□□□ 0.03
PCNX4-202ENST00000391611 BIN1O00499 593 aa15.26■□□□□ 0.03
PCNX4-202ENST00000391611 CLIP2Q9UDT6 1046 aa15.26■□□□□ 0.03
PCNX4-202ENST00000391611 CCDC82Q8N4S0 544 aa15.26■□□□□ 0.03
PCNX4-202ENST00000391611 TNNT1P13805 278 aa15.26■□□□□ 0.03
PCNX4-202ENST00000391611 LARP1Q6PKG0 1096 aaKnown RBP15.26■□□□□ 0.03
PCNX4-202ENST00000391611 UBE2Q2Q8WVN8 375 aa15.26■□□□□ 0.03
PCNX4-202ENST00000391611 SHANK2Q9UPX8 1470 aa15.25■□□□□ 0.03
PCNX4-202ENST00000391611 IDH1O75874 414 aaKnown RBP15.25■□□□□ 0.03
PCNX4-202ENST00000391611 GAS2L3Q86XJ1 694 aa15.25■□□□□ 0.03
PCNX4-202ENST00000391611 NUP133Q8WUM0 1156 aa15.25■□□□□ 0.03
PCNX4-202ENST00000391611 ADAMTS12P58397 1594 aa15.25■□□□□ 0.03
PCNX4-202ENST00000391611 ISM2Q6H9L7 571 aa15.25■□□□□ 0.03
PCNX4-202ENST00000391611 SNRKQ9NRH2 765 aa15.25■□□□□ 0.03
PCNX4-202ENST00000391611 PTPN14Q15678 1187 aa15.25■□□□□ 0.03
PCNX4-202ENST00000391611 ZHX1Q9UKY1 873 aaPredicted RBP15.25■□□□□ 0.03
PCNX4-202ENST00000391611 CHMLP26374 656 aa15.24■□□□□ 0.03
PCNX4-202ENST00000391611 NOLC1Q14978 699 aaKnown RBP eCLIP15.24■□□□□ 0.03
PCNX4-202ENST00000391611 PKP1Q13835 747 aa15.24■□□□□ 0.03
PCNX4-202ENST00000391611 EVI5LQ96CN4 794 aa15.24■□□□□ 0.03
PCNX4-202ENST00000391611 A0A087WZG4 1122 aa15.24■□□□□ 0.03
PCNX4-202ENST00000391611 CFAP100Q494V2 611 aa15.24■□□□□ 0.03
PCNX4-202ENST00000391611 TOM1L2Q6ZVM7 507 aa15.24■□□□□ 0.03
PCNX4-202ENST00000391611 JMYQ8N9B5 988 aa15.24■□□□□ 0.03
PCNX4-202ENST00000391611 PHAXQ9H814 394 aaKnown RBP15.24■□□□□ 0.03
PCNX4-202ENST00000391611 SAMD9Q5K651 1589 aa15.24■□□□□ 0.03
PCNX4-202ENST00000391611 AK2P54819 239 aa15.23■□□□□ 0.03
PCNX4-202ENST00000391611 SART3Q15020 963 aaKnown RBP15.23■□□□□ 0.03
PCNX4-202ENST00000391611 PIP4K2AP48426 406 aaPredicted RBP15.23■□□□□ 0.03
PCNX4-202ENST00000391611 UBE3BQ7Z3V4 1068 aa15.23■□□□□ 0.03
PCNX4-202ENST00000391611 ERICH4A6NGS2 130 aa15.23■□□□□ 0.03
PCNX4-202ENST00000391611 MCM5P33992 734 aa15.23■□□□□ 0.03
PCNX4-202ENST00000391611 RBM8AQ9Y5S9 174 aaKnown RBP15.23■□□□□ 0.03
PCNX4-202ENST00000391611 PTPRTO14522 1441 aa15.23■□□□□ 0.03
PCNX4-202ENST00000391611 HAND2P61296 217 aa15.22■□□□□ 0.03
PCNX4-202ENST00000391611 DDX46Q7L014 1031 aaKnown RBP15.22■□□□□ 0.03
PCNX4-202ENST00000391611 BRF1Q92994 677 aa15.22■□□□□ 0.03
PCNX4-202ENST00000391611 DACT1Q9NYF0 836 aa15.22■□□□□ 0.03
PCNX4-202ENST00000391611 PHF8Q9UPP1 1060 aa15.22■□□□□ 0.03
PCNX4-202ENST00000391611 PPP4R3BQ5MIZ7 849 aa15.22■□□□□ 0.03
PCNX4-202ENST00000391611 CCDC186Q7Z3E2 898 aa15.22■□□□□ 0.03
PCNX4-202ENST00000391611 PIBF1Q8WXW3 757 aa15.22■□□□□ 0.03
PCNX4-202ENST00000391611 GOLIM4O00461 696 aa15.22■□□□□ 0.03
PCNX4-202ENST00000391611 OFD1O75665 1012 aa15.22■□□□□ 0.03
PCNX4-202ENST00000391611 POLR3DP05423 398 aaPredicted RBP15.22■□□□□ 0.03
PCNX4-202ENST00000391611 HSP90B2PQ58FF3 399 aa15.22■□□□□ 0.03
PCNX4-202ENST00000391611 FAM173BQ6P4H8 233 aa15.22■□□□□ 0.03
PCNX4-202ENST00000391611 FSIP1Q8NA03 581 aa15.22■□□□□ 0.03
PCNX4-202ENST00000391611 IFIT1P09914 478 aaKnown RBP15.22■□□□□ 0.03
PCNX4-202ENST00000391611 NAP1L1P55209 391 aaKnown RBP15.22■□□□□ 0.03
PCNX4-202ENST00000391611 U3KPZ7 1027 aaPredicted RBP15.22■□□□□ 0.03
PCNX4-202ENST00000391611 G3V3G9 751 aa15.21■□□□□ 0.03
PCNX4-202ENST00000391611 CD2BP2O95400 341 aaKnown RBP15.21■□□□□ 0.03
PCNX4-202ENST00000391611 DCAF8Q5TAQ9 597 aa15.21■□□□□ 0.03
PCNX4-202ENST00000391611 PPIP5K1Q6PFW1 1433 aa15.21■□□□□ 0.03
PCNX4-202ENST00000391611 SFPQP23246 707 aaKnown RBP eCLIP15.21■□□□□ 0.03
PCNX4-202ENST00000391611 ANAPC15P60006 121 aa15.21■□□□□ 0.03
PCNX4-202ENST00000391611 EYA1Q99502 592 aa15.21■□□□□ 0.03
PCNX4-202ENST00000391611 IL13P35225 146 aa15.21■□□□□ 0.02
PCNX4-202ENST00000391611 SLC39A6Q13433 755 aa15.21■□□□□ 0.02
PCNX4-202ENST00000391611 PUS7Q96PZ0 661 aaKnown RBP15.21■□□□□ 0.02
PCNX4-202ENST00000391611 F13A1P00488 732 aa15.2■□□□□ 0.02
PCNX4-202ENST00000391611 GSPT1P15170 499 aaKnown RBP15.2■□□□□ 0.02
PCNX4-202ENST00000391611 XBP1P17861 261 aa15.2■□□□□ 0.02
PCNX4-202ENST00000391611 SYT1P21579 422 aa15.2■□□□□ 0.02
PCNX4-202ENST00000391611 CWF19L2Q2TBE0 894 aaKnown RBP15.2■□□□□ 0.02
PCNX4-202ENST00000391611 C8orf76Q96K31 380 aa15.2■□□□□ 0.02
PCNX4-202ENST00000391611 CTNNA3Q9UI47 895 aa15.2■□□□□ 0.02
PCNX4-202ENST00000391611 MSH6P52701 1360 aa15.2■□□□□ 0.02
PCNX4-202ENST00000391611 DYNC1I1O14576 645 aa15.2■□□□□ 0.02
PCNX4-202ENST00000391611 MAPK8IP2Q13387 824 aaPredicted RBP15.2■□□□□ 0.02
PCNX4-202ENST00000391611 CCDC70Q6NSX1 233 aa15.2■□□□□ 0.02
PCNX4-202ENST00000391611 KIF6Q6ZMV9 814 aa15.2■□□□□ 0.02
PCNX4-202ENST00000391611 C17orf53Q8N3J3 647 aaPredicted RBP15.2■□□□□ 0.02
PCNX4-202ENST00000391611 NEK1Q96PY6 1258 aa15.2■□□□□ 0.02
PCNX4-202ENST00000391611 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.2■□□□□ 0.02
PCNX4-202ENST00000391611 DDX19AQ9NUU7 478 aaKnown RBP15.2■□□□□ 0.02
PCNX4-202ENST00000391611 ANO10Q9NW15 660 aa15.2■□□□□ 0.02
PCNX4-202ENST00000391611 PIK3R4Q99570 1358 aa15.19■□□□□ 0.02
PCNX4-202ENST00000391611 PNMA6EA0A0J9YXQ4 647 aa15.19■□□□□ 0.02
PCNX4-202ENST00000391611 TRIM22Q8IYM9 498 aa15.19■□□□□ 0.02
PCNX4-202ENST00000391611 UBXN4Q92575 508 aa15.19■□□□□ 0.02
PCNX4-202ENST00000391611 ABCC10Q5T3U5 1492 aa15.19■□□□□ 0.02
PCNX4-202ENST00000391611 INSRP06213 1382 aa15.19■□□□□ 0.02
PCNX4-202ENST00000391611 EIF2AK4Q9P2K8 1649 aaKnown RBP15.19■□□□□ 0.02
PCNX4-202ENST00000391611 IMMTQ16891 758 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms