RNA–Protein interactions for RNA: ENST00000390009.7

ACTN4-202, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 2,102 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-202ENST00000390009 BECN1Q14457 450 aa22.56■■□□□ 1.2
ACTN4-202ENST00000390009 TBC1D9Q6ZT07 1266 aa22.55■■□□□ 1.2
ACTN4-202ENST00000390009 DDX21Q9NR30 783 aaKnown RBP eCLIP22.55■■□□□ 1.2
ACTN4-202ENST00000390009 KSR2Q6VAB6 950 aa22.54■■□□□ 1.2
ACTN4-202ENST00000390009 MAP3K2Q9Y2U5 619 aa22.54■■□□□ 1.2
ACTN4-202ENST00000390009 CDC45O75419 566 aa22.54■■□□□ 1.2
ACTN4-202ENST00000390009 NBPF7P0C2Y1 421 aaPredicted RBP22.54■■□□□ 1.2
ACTN4-202ENST00000390009 ZNF496Q96IT1 587 aaPredicted RBP22.54■■□□□ 1.2
ACTN4-202ENST00000390009 PDIA6Q15084 440 aa22.53■■□□□ 1.2
ACTN4-202ENST00000390009 TTC5Q8N0Z6 440 aa22.53■■□□□ 1.2
ACTN4-202ENST00000390009 PCDH11XQ9BZA7 1347 aa22.53■■□□□ 1.2
ACTN4-202ENST00000390009 PCDH11YQ9BZA8 1340 aa22.53■■□□□ 1.2
ACTN4-202ENST00000390009 IBTKQ9P2D0 1353 aaPredicted RBP22.53■■□□□ 1.2
ACTN4-202ENST00000390009 CABP4P57796 275 aa22.52■■□□□ 1.2
ACTN4-202ENST00000390009 ZCRB1Q8TBF4 217 aaKnown RBP22.52■■□□□ 1.2
ACTN4-202ENST00000390009 CARD10Q9BWT7 1032 aa22.52■■□□□ 1.2
ACTN4-202ENST00000390009 SSH3Q8TE77 659 aa22.52■■□□□ 1.2
ACTN4-202ENST00000390009 LRRCC1Q9C099 1032 aa22.52■■□□□ 1.2
ACTN4-202ENST00000390009 SHANK3Q9BYB0 1731 aa22.51■■□□□ 1.19
ACTN4-202ENST00000390009 RBM25P49756 843 aaKnown RBP22.51■■□□□ 1.19
ACTN4-202ENST00000390009 STRN4Q9NRL3 753 aa22.51■■□□□ 1.19
ACTN4-202ENST00000390009 ALDH1L1O75891 902 aa22.5■■□□□ 1.19
ACTN4-202ENST00000390009 DDX58O95786 925 aaKnown RBP22.5■■□□□ 1.19
ACTN4-202ENST00000390009 PPP1R42Q7Z4L9 355 aa22.5■■□□□ 1.19
ACTN4-202ENST00000390009 SNRPA1P09661 255 aaKnown RBP22.49■■□□□ 1.19
ACTN4-202ENST00000390009 IL2RBP14784 551 aa22.49■■□□□ 1.19
ACTN4-202ENST00000390009 LARP1Q6PKG0 1096 aaKnown RBP22.49■■□□□ 1.19
ACTN4-202ENST00000390009 OSBPL3Q9H4L5 887 aa22.49■■□□□ 1.19
ACTN4-202ENST00000390009 EVA1CP58658 441 aa22.49■■□□□ 1.19
ACTN4-202ENST00000390009 POLA2Q14181 598 aa22.49■■□□□ 1.19
ACTN4-202ENST00000390009 FMNL2Q96PY5 1086 aa22.49■■□□□ 1.19
ACTN4-202ENST00000390009 AIMP1Q12904 312 aaKnown RBP22.48■■□□□ 1.19
ACTN4-202ENST00000390009 LAMB4A4D0S4 1761 aa22.48■■□□□ 1.19
ACTN4-202ENST00000390009 ROBO1Q9Y6N7 1651 aa22.48■■□□□ 1.19
ACTN4-202ENST00000390009 GLI3P10071 1580 aa22.48■■□□□ 1.19
ACTN4-202ENST00000390009 PDE1AP54750 535 aa22.48■■□□□ 1.19
ACTN4-202ENST00000390009 TBC1D2Q9BYX2 928 aa22.48■■□□□ 1.19
ACTN4-202ENST00000390009 SALL3Q9BXA9 1300 aa22.47■■□□□ 1.19
ACTN4-202ENST00000390009 SDSP20132 328 aa22.47■■□□□ 1.19
ACTN4-202ENST00000390009 TUBGCP6Q96RT7 1819 aa22.47■■□□□ 1.19
ACTN4-202ENST00000390009 SRGAP3O43295 1099 aa22.46■■□□□ 1.19
ACTN4-202ENST00000390009 MYL6BP14649 208 aa22.46■■□□□ 1.19
ACTN4-202ENST00000390009 CWF19L2Q2TBE0 894 aaKnown RBP22.46■■□□□ 1.19
ACTN4-202ENST00000390009 C9orf78Q9NZ63 289 aaPredicted RBP22.46■■□□□ 1.19
ACTN4-202ENST00000390009 USP16Q9Y5T5 823 aa22.46■■□□□ 1.19
ACTN4-202ENST00000390009 LINS1Q8NG48 757 aa22.46■■□□□ 1.19
ACTN4-202ENST00000390009 UBR2Q8IWV8 1755 aa22.45■■□□□ 1.18
ACTN4-202ENST00000390009 ERVV-2B6SEH9 535 aa22.44■■□□□ 1.18
ACTN4-202ENST00000390009 EIF5BO60841 1220 aaKnown RBP22.44■■□□□ 1.18
ACTN4-202ENST00000390009 SURF6O75683 361 aaKnown RBP22.44■■□□□ 1.18
ACTN4-202ENST00000390009 NKX1-1Q15270 411 aaPredicted RBP22.44■■□□□ 1.18
ACTN4-202ENST00000390009 RIC3Q7Z5B4 369 aa22.44■■□□□ 1.18
ACTN4-202ENST00000390009 RAB11FIP3O75154 756 aa22.43■■□□□ 1.18
ACTN4-202ENST00000390009 XAGE3Q8WTP9 111 aa22.43■■□□□ 1.18
ACTN4-202ENST00000390009 MX1P20591 662 aa22.43■■□□□ 1.18
ACTN4-202ENST00000390009 COPS6Q7L5N1 327 aa22.43■■□□□ 1.18
ACTN4-202ENST00000390009 PAPPAQ13219 1627 aa22.42■■□□□ 1.18
ACTN4-202ENST00000390009 MTX1Q13505 466 aa22.42■■□□□ 1.18
ACTN4-202ENST00000390009 LRP10Q7Z4F1 713 aa22.42■■□□□ 1.18
ACTN4-202ENST00000390009 DDX54Q8TDD1 881 aaKnown RBP22.42■■□□□ 1.18
ACTN4-202ENST00000390009 HDAC5Q9UQL6 1122 aa22.42■■□□□ 1.18
ACTN4-202ENST00000390009 AHDC1Q5TGY3 1603 aaPredicted RBP22.42■■□□□ 1.18
ACTN4-202ENST00000390009 RTL5Q5HYW3 569 aaPredicted RBP22.42■■□□□ 1.18
ACTN4-202ENST00000390009 COL14A1Q05707 1796 aaKnown RBP22.41■■□□□ 1.18
ACTN4-202ENST00000390009 GRM8O00222 908 aa22.41■■□□□ 1.18
ACTN4-202ENST00000390009 BTG4Q9NY30 223 aa22.41■■□□□ 1.18
ACTN4-202ENST00000390009 UTYO14607 1347 aa22.41■■□□□ 1.18
ACTN4-202ENST00000390009 TSHZ3Q63HK5 1081 aa22.4■■□□□ 1.18
ACTN4-202ENST00000390009 CASC1Q6TDU7 716 aa22.4■■□□□ 1.18
ACTN4-202ENST00000390009 IL1RAPL2Q9NP60 686 aa22.4■■□□□ 1.18
ACTN4-202ENST00000390009 IGKV5-2P06315 115 aa22.4■■□□□ 1.18
ACTN4-202ENST00000390009 PIP4K2AP48426 406 aaPredicted RBP22.4■■□□□ 1.18
ACTN4-202ENST00000390009 USP35Q9P2H5 1018 aa22.4■■□□□ 1.18
ACTN4-202ENST00000390009 COL22A1Q8NFW1 1626 aaPredicted RBP22.39■■□□□ 1.18
ACTN4-202ENST00000390009 NEXNQ0ZGT2 675 aa22.39■■□□□ 1.18
ACTN4-202ENST00000390009 RHPN1Q8TCX5 695 aa22.39■■□□□ 1.18
ACTN4-202ENST00000390009 STAP2Q9UGK3 403 aa22.39■■□□□ 1.18
ACTN4-202ENST00000390009 TOGARAM1Q9Y4F4 1720 aa22.39■■□□□ 1.18
ACTN4-202ENST00000390009 ARFGEF2Q9Y6D5 1785 aa22.39■■□□□ 1.17
ACTN4-202ENST00000390009 KIF1BPQ96EK5 621 aa22.39■■□□□ 1.17
ACTN4-202ENST00000390009 KIF2CQ99661 725 aa22.39■■□□□ 1.17
ACTN4-202ENST00000390009 HSP90AB4PQ58FF6 505 aa22.38■■□□□ 1.17
ACTN4-202ENST00000390009 ANKRD13DQ6ZTN6 518 aa22.38■■□□□ 1.17
ACTN4-202ENST00000390009 METTL22Q9BUU2 404 aaPredicted RBP22.38■■□□□ 1.17
ACTN4-202ENST00000390009 AFDNP55196 1824 aaKnown RBP22.38■■□□□ 1.17
ACTN4-202ENST00000390009 KCPQ6ZWJ8 1503 aa22.38■■□□□ 1.17
ACTN4-202ENST00000390009 NEURL1BA8MQ27 555 aa22.37■■□□□ 1.17
ACTN4-202ENST00000390009 SLKQ9H2G2 1235 aaPredicted RBP22.37■■□□□ 1.17
ACTN4-202ENST00000390009 LTBP4Q8N2S1 1624 aa22.37■■□□□ 1.17
ACTN4-202ENST00000390009 SUCLG2Q96I99 432 aa22.36■■□□□ 1.17
ACTN4-202ENST00000390009 MYD88Q99836 296 aa22.36■■□□□ 1.17
ACTN4-202ENST00000390009 COL16A1Q07092 1604 aaPredicted RBP22.36■■□□□ 1.17
ACTN4-202ENST00000390009 AOX1Q06278 1338 aa22.36■■□□□ 1.17
ACTN4-202ENST00000390009 HSCBQ8IWL3 235 aa22.36■■□□□ 1.17
ACTN4-202ENST00000390009 KAZALD1Q96I82 304 aa22.36■■□□□ 1.17
ACTN4-202ENST00000390009 NFKBIBQ15653 356 aa22.35■■□□□ 1.17
ACTN4-202ENST00000390009 ERBB4Q15303 1308 aa22.35■■□□□ 1.17
ACTN4-202ENST00000390009 GCKRQ14397 625 aa22.34■■□□□ 1.17
ACTN4-202ENST00000390009 NUTM1Q86Y26 1132 aa22.34■■□□□ 1.17
ACTN4-202ENST00000390009 SNX21Q969T3 373 aa22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms