RNA–Protein interactions for RNA: ENST00000380535.8

TNFSF13-203, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-203ENST00000380535 SMC5Q8IY18 1101 aa17.32■□□□□ 0.36
TNFSF13-203ENST00000380535 THRAP3Q9Y2W1 955 aaKnown RBP17.32■□□□□ 0.36
TNFSF13-203ENST00000380535 DISP2A7MBM2 1401 aa17.32■□□□□ 0.36
TNFSF13-203ENST00000380535 LAMB4A4D0S4 1761 aa17.32■□□□□ 0.36
TNFSF13-203ENST00000380535 LRP6O75581 1613 aa17.32■□□□□ 0.36
TNFSF13-203ENST00000380535 HYPKQ9NX55 129 aa17.32■□□□□ 0.36
TNFSF13-203ENST00000380535 NBR1Q14596 966 aa17.31■□□□□ 0.36
TNFSF13-203ENST00000380535 TMEM132AQ24JP5 1023 aa17.31■□□□□ 0.36
TNFSF13-203ENST00000380535 NAP1L5Q96NT1 182 aaPredicted RBP17.31■□□□□ 0.36
TNFSF13-203ENST00000380535 FMNL2Q96PY5 1086 aa17.31■□□□□ 0.36
TNFSF13-203ENST00000380535 PAPPAQ13219 1627 aa17.31■□□□□ 0.36
TNFSF13-203ENST00000380535 UBAP1LF5GYI3 381 aa17.3■□□□□ 0.36
TNFSF13-203ENST00000380535 GNAI3P08754 354 aa17.3■□□□□ 0.36
TNFSF13-203ENST00000380535 C8orf34Q49A92 452 aa17.3■□□□□ 0.36
TNFSF13-203ENST00000380535 G2E3Q7L622 706 aa17.3■□□□□ 0.36
TNFSF13-203ENST00000380535 NFATC2IPQ8NCF5 419 aa17.3■□□□□ 0.36
TNFSF13-203ENST00000380535 UBR2Q8IWV8 1755 aa17.3■□□□□ 0.36
TNFSF13-203ENST00000380535 KCNQ3O43525 872 aa17.29■□□□□ 0.36
TNFSF13-203ENST00000380535 EIF2S2P20042 333 aaKnown RBP17.29■□□□□ 0.36
TNFSF13-203ENST00000380535 PAXIP1Q6ZW49 1069 aaPredicted RBP17.29■□□□□ 0.36
TNFSF13-203ENST00000380535 IBTKQ9P2D0 1353 aaPredicted RBP17.29■□□□□ 0.36
TNFSF13-203ENST00000380535 ERBB4Q15303 1308 aa17.29■□□□□ 0.36
TNFSF13-203ENST00000380535 ATP10DQ9P241 1426 aa17.29■□□□□ 0.36
TNFSF13-203ENST00000380535 SNRPA1P09661 255 aaKnown RBP17.29■□□□□ 0.36
TNFSF13-203ENST00000380535 PDZRN3Q9UPQ7 1066 aa17.29■□□□□ 0.36
TNFSF13-203ENST00000380535 HDAC5Q9UQL6 1122 aa17.29■□□□□ 0.36
TNFSF13-203ENST00000380535 JCADQ9P266 1359 aa17.29■□□□□ 0.36
TNFSF13-203ENST00000380535 DDX58O95786 925 aaKnown RBP17.28■□□□□ 0.36
TNFSF13-203ENST00000380535 DDX21Q9NR30 783 aaKnown RBP eCLIP17.28■□□□□ 0.36
TNFSF13-203ENST00000380535 HMMRO75330 724 aa17.28■□□□□ 0.36
TNFSF13-203ENST00000380535 PIP4K2BP78356 416 aa17.28■□□□□ 0.36
TNFSF13-203ENST00000380535 CHPF2Q9P2E5 772 aa17.28■□□□□ 0.36
TNFSF13-203ENST00000380535 C5P01031 1676 aa17.27■□□□□ 0.36
TNFSF13-203ENST00000380535 ANKRD44Q8N8A2 993 aa17.27■□□□□ 0.36
TNFSF13-203ENST00000380535 SLC4A10Q6U841 1118 aa17.26■□□□□ 0.35
TNFSF13-203ENST00000380535 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.26■□□□□ 0.35
TNFSF13-203ENST00000380535 NECTIN2Q92692 538 aa17.26■□□□□ 0.35
TNFSF13-203ENST00000380535 SLIT2O94813 1529 aa17.25■□□□□ 0.35
TNFSF13-203ENST00000380535 TNS2Q63HR2 1409 aa17.25■□□□□ 0.35
TNFSF13-203ENST00000380535 GNAI2P04899 355 aa17.25■□□□□ 0.35
TNFSF13-203ENST00000380535 DNAAF4Q8WXU2 420 aa17.25■□□□□ 0.35
TNFSF13-203ENST00000380535 NUCB1Q02818 461 aa17.24■□□□□ 0.35
TNFSF13-203ENST00000380535 DDRGK1Q96HY6 314 aa17.24■□□□□ 0.35
TNFSF13-203ENST00000380535 SRCIN1Q9C0H9 1055 aa17.24■□□□□ 0.35
TNFSF13-203ENST00000380535 SPATA31A6Q5VVP1 1343 aa17.24■□□□□ 0.35
TNFSF13-203ENST00000380535 F6X3S4 739 aa17.23■□□□□ 0.35
TNFSF13-203ENST00000380535 EXOC5O00471 708 aa17.23■□□□□ 0.35
TNFSF13-203ENST00000380535 ALDH1L1O75891 902 aa17.23■□□□□ 0.35
TNFSF13-203ENST00000380535 KSR2Q6VAB6 950 aa17.23■□□□□ 0.35
TNFSF13-203ENST00000380535 DDX54Q8TDD1 881 aaKnown RBP17.23■□□□□ 0.35
TNFSF13-203ENST00000380535 ZNF496Q96IT1 587 aaPredicted RBP17.23■□□□□ 0.35
TNFSF13-203ENST00000380535 PHAXQ9H814 394 aaKnown RBP17.23■□□□□ 0.35
TNFSF13-203ENST00000380535 TOGARAM1Q9Y4F4 1720 aa17.23■□□□□ 0.35
TNFSF13-203ENST00000380535 SPATA31A1Q5TZJ5 1347 aa17.23■□□□□ 0.35
TNFSF13-203ENST00000380535 SLC39A6Q13433 755 aa17.22■□□□□ 0.35
TNFSF13-203ENST00000380535 RTL5Q5HYW3 569 aaPredicted RBP17.22■□□□□ 0.35
TNFSF13-203ENST00000380535 TMOD3Q9NYL9 352 aa17.22■□□□□ 0.35
TNFSF13-203ENST00000380535 CEP85Q6P2H3 762 aa17.22■□□□□ 0.35
TNFSF13-203ENST00000380535 BARGINQ6ZT62 677 aa17.22■□□□□ 0.35
TNFSF13-203ENST00000380535 CERKQ8TCT0 537 aa17.22■□□□□ 0.35
TNFSF13-203ENST00000380535 MEIS3Q99687 375 aa17.22■□□□□ 0.35
TNFSF13-203ENST00000380535 TEX13AQ9BXU3 409 aaPredicted RBP17.22■□□□□ 0.35
TNFSF13-203ENST00000380535 GLI3P10071 1580 aa17.22■□□□□ 0.35
TNFSF13-203ENST00000380535 DCTPP1Q9H773 170 aa17.21■□□□□ 0.35
TNFSF13-203ENST00000380535 KCPQ6ZWJ8 1503 aa17.21■□□□□ 0.35
TNFSF13-203ENST00000380535 ADAMTS2O95450 1211 aa17.21■□□□□ 0.34
TNFSF13-203ENST00000380535 CHD1LQ86WJ1 897 aa17.21■□□□□ 0.34
TNFSF13-203ENST00000380535 USP35Q9P2H5 1018 aa17.21■□□□□ 0.34
TNFSF13-203ENST00000380535 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.2■□□□□ 0.34
TNFSF13-203ENST00000380535 ITGB4P16144 1822 aa17.2■□□□□ 0.34
TNFSF13-203ENST00000380535 VSIG10Q8N0Z9 540 aa17.2■□□□□ 0.34
TNFSF13-203ENST00000380535 C1orf115Q9H7X2 142 aa17.2■□□□□ 0.34
TNFSF13-203ENST00000380535 SPATA31A5Q5VU36 1347 aa17.2■□□□□ 0.34
TNFSF13-203ENST00000380535 SPATA31A7Q8IWB4 1347 aa17.2■□□□□ 0.34
TNFSF13-203ENST00000380535 PI4KAP2A4QPH2 592 aa17.19■□□□□ 0.34
TNFSF13-203ENST00000380535 UBTFL1P0CB47 393 aaPredicted RBP17.19■□□□□ 0.34
TNFSF13-203ENST00000380535 SIRT2Q8IXJ6 389 aa17.19■□□□□ 0.34
TNFSF13-203ENST00000380535 PI4KAP1Q8N8J0 262 aa17.19■□□□□ 0.34
TNFSF13-203ENST00000380535 ADCY9O60503 1353 aa17.19■□□□□ 0.34
TNFSF13-203ENST00000380535 BEND3Q5T5X7 828 aa17.19■□□□□ 0.34
TNFSF13-203ENST00000380535 PDIA6Q15084 440 aa17.18■□□□□ 0.34
TNFSF13-203ENST00000380535 NUTM2BA6NNL0 878 aaPredicted RBP17.18■□□□□ 0.34
TNFSF13-203ENST00000380535 NUTM2EB1AL46 878 aaPredicted RBP17.18■□□□□ 0.34
TNFSF13-203ENST00000380535 NUTM2AQ8IVF1 878 aaPredicted RBP17.18■□□□□ 0.34
TNFSF13-203ENST00000380535 NEXNQ0ZGT2 675 aa17.17■□□□□ 0.34
TNFSF13-203ENST00000380535 UNC5CLQ8IV45 518 aa17.17■□□□□ 0.34
TNFSF13-203ENST00000380535 LINS1Q8NG48 757 aa17.17■□□□□ 0.34
TNFSF13-203ENST00000380535 ATP8B2P98198 1209 aa17.16■□□□□ 0.34
TNFSF13-203ENST00000380535 USP44Q9H0E7 712 aa17.16■□□□□ 0.34
TNFSF13-203ENST00000380535 MAP3K2Q9Y2U5 619 aa17.16■□□□□ 0.34
TNFSF13-203ENST00000380535 DDB1Q16531 1140 aa17.16■□□□□ 0.34
TNFSF13-203ENST00000380535 ANKRD45Q5TZF3 282 aa17.15■□□□□ 0.34
TNFSF13-203ENST00000380535 BCL9O00512 1426 aa17.15■□□□□ 0.34
TNFSF13-203ENST00000380535 PRAMEF22A3QJZ6 481 aa17.15■□□□□ 0.34
TNFSF13-203ENST00000380535 VPS72Q15906 364 aa17.15■□□□□ 0.34
TNFSF13-203ENST00000380535 RIC3Q7Z5B4 369 aa17.15■□□□□ 0.34
TNFSF13-203ENST00000380535 PROSER3Q2NL68 480 aa17.14■□□□□ 0.33
TNFSF13-203ENST00000380535 USP16Q9Y5T5 823 aa17.14■□□□□ 0.33
TNFSF13-203ENST00000380535 DOT1LQ8TEK3 1739 aa17.13■□□□□ 0.33
TNFSF13-203ENST00000380535 UTYO14607 1347 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms