RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 LINC00116Q8NCU8 138 aa27.41■■□□□ 1.98
CBWD3-202ENST00000377342 SSH1Q8WYL5 1049 aa27.41■■□□□ 1.98
CBWD3-202ENST00000377342 RCAN3Q9UKA8 241 aa27.41■■□□□ 1.98
CBWD3-202ENST00000377342 CENPBP07199 599 aaPredicted RBP27.4■■□□□ 1.98
CBWD3-202ENST00000377342 TXNRD1Q16881 649 aa27.4■■□□□ 1.98
CBWD3-202ENST00000377342 BCL2L13Q9BXK5 485 aa27.4■■□□□ 1.98
CBWD3-202ENST00000377342 TEX13AQ9BXU3 409 aaPredicted RBP27.4■■□□□ 1.98
CBWD3-202ENST00000377342 CHPF2Q9P2E5 772 aa27.39■■□□□ 1.97
CBWD3-202ENST00000377342 ALDH1L2Q3SY69 923 aa27.38■■□□□ 1.97
CBWD3-202ENST00000377342 SLC27A3Q5K4L6 730 aa27.38■■□□□ 1.97
CBWD3-202ENST00000377342 CCDC30Q5VVM6 783 aa27.38■■□□□ 1.97
CBWD3-202ENST00000377342 PDIA6Q15084 440 aa27.37■■□□□ 1.97
CBWD3-202ENST00000377342 PROSER3Q2NL68 480 aa27.37■■□□□ 1.97
CBWD3-202ENST00000377342 CAMKK2Q96RR4 588 aa27.37■■□□□ 1.97
CBWD3-202ENST00000377342 UBR3Q6ZT12 1888 aa27.37■■□□□ 1.97
CBWD3-202ENST00000377342 TUBGCP6Q96RT7 1819 aa27.37■■□□□ 1.97
CBWD3-202ENST00000377342 ERBB4Q15303 1308 aa27.36■■□□□ 1.97
CBWD3-202ENST00000377342 NBPF26B4DH59 902 aa27.36■■□□□ 1.97
CBWD3-202ENST00000377342 BCAR3O75815 825 aa27.36■■□□□ 1.97
CBWD3-202ENST00000377342 STARD3NLO95772 234 aa27.36■■□□□ 1.97
CBWD3-202ENST00000377342 ANXA1P04083 346 aa27.36■■□□□ 1.97
CBWD3-202ENST00000377342 A1BGP04217 495 aa27.36■■□□□ 1.97
CBWD3-202ENST00000377342 PIP4K2AP48426 406 aaPredicted RBP27.36■■□□□ 1.97
CBWD3-202ENST00000377342 EN1Q05925 392 aaPredicted RBP27.36■■□□□ 1.97
CBWD3-202ENST00000377342 NBPF14Q5TI25 921 aa27.36■■□□□ 1.97
CBWD3-202ENST00000377342 NBPF10Q6P3W6 841 aaKnown RBP27.36■■□□□ 1.97
CBWD3-202ENST00000377342 NBPF15Q8N660 670 aa27.36■■□□□ 1.97
CBWD3-202ENST00000377342 SF3B2Q13435 895 aaKnown RBP27.35■■□□□ 1.97
CBWD3-202ENST00000377342 LRP10Q7Z4F1 713 aa27.35■■□□□ 1.97
CBWD3-202ENST00000377342 DEFB132Q7Z7B7 95 aa27.35■■□□□ 1.97
CBWD3-202ENST00000377342 CCDC125Q86Z20 511 aa27.35■■□□□ 1.97
CBWD3-202ENST00000377342 MRPL50Q8N5N7 158 aaKnown RBP27.35■■□□□ 1.97
CBWD3-202ENST00000377342 SMC4Q9NTJ3 1288 aa27.35■■□□□ 1.97
CBWD3-202ENST00000377342 CNTNAP4Q9C0A0 1308 aa27.34■■□□□ 1.97
CBWD3-202ENST00000377342 CRKLP46109 303 aaKnown RBP27.34■■□□□ 1.97
CBWD3-202ENST00000377342 UPF1Q92900 1129 aaKnown RBP eCLIP27.34■■□□□ 1.97
CBWD3-202ENST00000377342 ZBTB1Q9Y2K1 713 aa27.34■■□□□ 1.97
CBWD3-202ENST00000377342 BAG6P46379 1132 aa27.33■■□□□ 1.97
CBWD3-202ENST00000377342 EZH2Q15910 746 aaKnown RBP27.33■■□□□ 1.97
CBWD3-202ENST00000377342 INTS5Q6P9B9 1019 aaKnown RBP27.33■■□□□ 1.97
CBWD3-202ENST00000377342 DBF4Q9UBU7 674 aaPredicted RBP27.33■■□□□ 1.97
CBWD3-202ENST00000377342 STK31Q9BXU1 1019 aa27.33■■□□□ 1.97
CBWD3-202ENST00000377342 DDX21Q9NR30 783 aaKnown RBP eCLIP27.33■■□□□ 1.97
CBWD3-202ENST00000377342 CCDC87Q9NVE4 849 aa27.33■■□□□ 1.97
CBWD3-202ENST00000377342 CHMP4AQ9BY43 222 aa27.32■■□□□ 1.96
CBWD3-202ENST00000377342 C4AP0C0L4 1744 aa27.32■■□□□ 1.96
CBWD3-202ENST00000377342 SLC4A2P04920 1241 aa27.31■■□□□ 1.96
CBWD3-202ENST00000377342 BRPF1P55201 1214 aaPredicted RBP27.31■■□□□ 1.96
CBWD3-202ENST00000377342 G2E3Q7L622 706 aa27.3■■□□□ 1.96
CBWD3-202ENST00000377342 MYL6BP14649 208 aa27.29■■□□□ 1.96
CBWD3-202ENST00000377342 ARFGEF2Q9Y6D5 1785 aa27.28■■□□□ 1.96
CBWD3-202ENST00000377342 PHAXQ9H814 394 aaKnown RBP27.28■■□□□ 1.96
CBWD3-202ENST00000377342 CANXP27824 592 aaKnown RBP27.27■■□□□ 1.96
CBWD3-202ENST00000377342 RC3H1Q5TC82 1133 aaKnown RBP27.27■■□□□ 1.96
CBWD3-202ENST00000377342 BCORQ6W2J9 1755 aa27.27■■□□□ 1.96
CBWD3-202ENST00000377342 AMIGO3Q86WK7 504 aa27.27■■□□□ 1.96
CBWD3-202ENST00000377342 HYPKQ9NX55 129 aa27.27■■□□□ 1.96
CBWD3-202ENST00000377342 KIF16BQ96L93 1317 aa27.26■■□□□ 1.95
CBWD3-202ENST00000377342 N4BP2Q86UW6 1770 aaPredicted RBP27.26■■□□□ 1.95
CBWD3-202ENST00000377342 SCN7AQ01118 1682 aa27.26■■□□□ 1.95
CBWD3-202ENST00000377342 QSER1Q2KHR3 1735 aa27.25■■□□□ 1.95
CBWD3-202ENST00000377342 FLIIQ13045 1269 aa27.25■■□□□ 1.95
CBWD3-202ENST00000377342 RNF123Q5XPI4 1314 aa27.25■■□□□ 1.95
CBWD3-202ENST00000377342 IL6STP40189 918 aaPredicted RBP27.24■■□□□ 1.95
CBWD3-202ENST00000377342 ZNF827Q17R98 1081 aa27.24■■□□□ 1.95
CBWD3-202ENST00000377342 COL15A1P39059 1388 aa27.24■■□□□ 1.95
CBWD3-202ENST00000377342 EIF5P55010 431 aaKnown RBP27.24■■□□□ 1.95
CBWD3-202ENST00000377342 NOB1Q9ULX3 412 aaKnown RBP27.24■■□□□ 1.95
CBWD3-202ENST00000377342 GNPATO15228 680 aa27.23■■□□□ 1.95
CBWD3-202ENST00000377342 AKT1S1Q96B36 256 aa27.23■■□□□ 1.95
CBWD3-202ENST00000377342 XAGE3Q8WTP9 111 aa27.22■■□□□ 1.95
CBWD3-202ENST00000377342 ANO8Q9HCE9 1232 aaPredicted RBP27.22■■□□□ 1.95
CBWD3-202ENST00000377342 RRP1P56182 461 aaKnown RBP27.21■■□□□ 1.95
CBWD3-202ENST00000377342 SMIM5Q71RC9 77 aa27.21■■□□□ 1.95
CBWD3-202ENST00000377342 AK7Q96M32 723 aa27.21■■□□□ 1.95
CBWD3-202ENST00000377342 SUPT16HQ9Y5B9 1047 aaKnown RBP27.21■■□□□ 1.95
CBWD3-202ENST00000377342 RPS6KA4O75676 772 aa27.21■■□□□ 1.95
CBWD3-202ENST00000377342 COPS6Q7L5N1 327 aa27.21■■□□□ 1.95
CBWD3-202ENST00000377342 FRAT1Q92837 279 aaPredicted RBP27.21■■□□□ 1.95
CBWD3-202ENST00000377342 TNNQ9UQP3 1299 aa27.21■■□□□ 1.95
CBWD3-202ENST00000377342 ZNF330Q9Y3S2 320 aaPredicted RBP27.21■■□□□ 1.95
CBWD3-202ENST00000377342 PTPRCP08575 1304 aa27.2■■□□□ 1.95
CBWD3-202ENST00000377342 ADCY9O60503 1353 aa27.2■■□□□ 1.95
CBWD3-202ENST00000377342 PLIN1O60240 522 aa27.2■■□□□ 1.94
CBWD3-202ENST00000377342 TTLL7Q6ZT98 887 aa27.2■■□□□ 1.94
CBWD3-202ENST00000377342 ANKRD36CQ5JPF3 1778 aa27.2■■□□□ 1.94
CBWD3-202ENST00000377342 NUP98P52948 1817 aa27.19■■□□□ 1.94
CBWD3-202ENST00000377342 AIMP1Q12904 312 aaKnown RBP27.18■■□□□ 1.94
CBWD3-202ENST00000377342 TRIM27P14373 513 aa27.17■■□□□ 1.94
CBWD3-202ENST00000377342 FKBP5Q13451 457 aaPredicted RBP27.17■■□□□ 1.94
CBWD3-202ENST00000377342 RTCBQ9Y3I0 505 aaKnown RBP27.17■■□□□ 1.94
CBWD3-202ENST00000377342 HMGB2P26583 209 aaKnown RBP27.17■■□□□ 1.94
CBWD3-202ENST00000377342 ZKSCAN2Q63HK3 967 aa27.17■■□□□ 1.94
CBWD3-202ENST00000377342 ARHGAP45Q92619 1136 aa27.17■■□□□ 1.94
CBWD3-202ENST00000377342 ATF7IPQ6VMQ6 1270 aa27.16■■□□□ 1.94
CBWD3-202ENST00000377342 PXDNLA1KZ92 1463 aa27.15■■□□□ 1.94
CBWD3-202ENST00000377342 ABCC4O15439 1325 aa27.14■■□□□ 1.93
CBWD3-202ENST00000377342 F6X3S4 739 aa27.14■■□□□ 1.93
CBWD3-202ENST00000377342 PHF14O94880 888 aa27.14■■□□□ 1.93
CBWD3-202ENST00000377342 AFDNP55196 1824 aaKnown RBP27.13■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 98.7 ms