RNA–Protein interactions for RNA: ENST00000376836.7

COMMD3-201, Transcript of COMM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMMD3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD3-201ENST00000376836 TSPYL4Q9UJ04 414 aa35.53■■■■□ 3.28
COMMD3-201ENST00000376836 PTGER2P43116 358 aa35.52■■■■□ 3.28
COMMD3-201ENST00000376836 FAM9BQ8IZU0 186 aa35.51■■■■□ 3.27
COMMD3-201ENST00000376836 ARHGEF1Q92888 912 aaKnown RBP35.51■■■■□ 3.27
COMMD3-201ENST00000376836 CALD1Q05682 793 aaKnown RBP35.49■■■■□ 3.27
COMMD3-201ENST00000376836 MSL1Q68DK7 614 aa35.48■■■■□ 3.27
COMMD3-201ENST00000376836 LAS1LQ9Y4W2 734 aaKnown RBP35.48■■■■□ 3.27
COMMD3-201ENST00000376836 CANXP27824 592 aaKnown RBP35.47■■■■□ 3.27
COMMD3-201ENST00000376836 DIEXFQ68CQ4 756 aaKnown RBP35.47■■■■□ 3.27
COMMD3-201ENST00000376836 NPM2Q86SE8 214 aaKnown RBP35.47■■■■□ 3.27
COMMD3-201ENST00000376836 ARXQ96QS3 562 aa35.46■■■■□ 3.27
COMMD3-201ENST00000376836 SGIP1Q9BQI5 828 aa35.46■■■■□ 3.27
COMMD3-201ENST00000376836 ZBTB1Q9Y2K1 713 aa35.46■■■■□ 3.27
COMMD3-201ENST00000376836 EIF4A1P60842 406 aaKnown RBP35.44■■■■□ 3.26
COMMD3-201ENST00000376836 SOS1Q07889 1333 aaPredicted RBP35.44■■■■□ 3.26
COMMD3-201ENST00000376836 USP16Q9Y5T5 823 aa35.43■■■■□ 3.26
COMMD3-201ENST00000376836 MYH14Q7Z406 1995 aaKnown RBP35.43■■■■□ 3.26
COMMD3-201ENST00000376836 A0A087WZG4 1122 aa35.41■■■■□ 3.26
COMMD3-201ENST00000376836 ZPR1O75312 459 aa35.41■■■■□ 3.26
COMMD3-201ENST00000376836 NLGN1Q8N2Q7 840 aa35.41■■■■□ 3.26
COMMD3-201ENST00000376836 CCER2I3L3R5 266 aa35.4■■■■□ 3.26
COMMD3-201ENST00000376836 A1BGP04217 495 aa35.4■■■■□ 3.26
COMMD3-201ENST00000376836 KDM3BQ7LBC6 1761 aa35.4■■■■□ 3.26
COMMD3-201ENST00000376836 PRAMEF22A3QJZ6 481 aa35.39■■■■□ 3.26
COMMD3-201ENST00000376836 CHL1O00533 1208 aa35.39■■■■□ 3.26
COMMD3-201ENST00000376836 ZNF330Q9Y3S2 320 aaPredicted RBP35.39■■■■□ 3.26
COMMD3-201ENST00000376836 GIGYF1O75420 1035 aaPredicted RBP35.38■■■■□ 3.25
COMMD3-201ENST00000376836 CFAP44Q96MT7 982 aa35.38■■■■□ 3.25
COMMD3-201ENST00000376836 COL15A1P39059 1388 aa35.38■■■■□ 3.25
COMMD3-201ENST00000376836 IL6STP40189 918 aaPredicted RBP35.37■■■■□ 3.25
COMMD3-201ENST00000376836 CCDC27Q2M243 656 aa35.36■■■■□ 3.25
COMMD3-201ENST00000376836 NCBP3Q53F19 620 aaKnown RBP35.36■■■■□ 3.25
COMMD3-201ENST00000376836 GYS1P13807 737 aa35.35■■■■□ 3.25
COMMD3-201ENST00000376836 EIF5P55010 431 aaKnown RBP35.35■■■■□ 3.25
COMMD3-201ENST00000376836 GNAI1P63096 354 aa35.35■■■■□ 3.25
COMMD3-201ENST00000376836 USP42Q9H9J4 1324 aaKnown RBP35.35■■■■□ 3.25
COMMD3-201ENST00000376836 IFT57Q9NWB7 429 aa35.34■■■■□ 3.25
COMMD3-201ENST00000376836 SRP68Q9UHB9 627 aaKnown RBP35.34■■■■□ 3.25
COMMD3-201ENST00000376836 SENP3-EIF4A1A0A087X0R7 540 aa35.33■■■■□ 3.25
COMMD3-201ENST00000376836 KLHL34Q8N239 644 aa35.33■■■■□ 3.25
COMMD3-201ENST00000376836 NARFQ9UHQ1 456 aa35.33■■■■□ 3.25
COMMD3-201ENST00000376836 FHDC1Q9C0D6 1143 aaPredicted RBP35.32■■■■□ 3.25
COMMD3-201ENST00000376836 COL24A1Q17RW2 1714 aa35.32■■■■□ 3.24
COMMD3-201ENST00000376836 USPL1Q5W0Q7 1092 aa35.32■■■■□ 3.24
COMMD3-201ENST00000376836 WWC1Q8IX03 1113 aa35.31■■■■□ 3.24
COMMD3-201ENST00000376836 MMP10P09238 476 aa35.3■■■■□ 3.24
COMMD3-201ENST00000376836 NGEFQ8N5V2 710 aa35.3■■■■□ 3.24
COMMD3-201ENST00000376836 SALL2Q9Y467 1007 aaPredicted RBP35.3■■■■□ 3.24
COMMD3-201ENST00000376836 C4AP0C0L4 1744 aa35.28■■■■□ 3.24
COMMD3-201ENST00000376836 PIP4K2AP48426 406 aaPredicted RBP35.28■■■■□ 3.24
COMMD3-201ENST00000376836 MBIPQ9NS73 344 aa35.28■■■■□ 3.24
COMMD3-201ENST00000376836 ZNF853P0CG23 659 aa35.27■■■■□ 3.24
COMMD3-201ENST00000376836 SYT17Q9BSW7 474 aa35.27■■■■□ 3.24
COMMD3-201ENST00000376836 PARP3Q9Y6F1 533 aa35.27■■■■□ 3.24
COMMD3-201ENST00000376836 EIF2S2P20042 333 aaKnown RBP35.26■■■■□ 3.23
COMMD3-201ENST00000376836 FKBP8Q14318 412 aa35.26■■■■□ 3.23
COMMD3-201ENST00000376836 TBC1D2BQ9UPU7 963 aa35.26■■■■□ 3.23
COMMD3-201ENST00000376836 DZIP3Q86Y13 1208 aaKnown RBP35.25■■■■□ 3.23
COMMD3-201ENST00000376836 ERBB4Q15303 1308 aa35.23■■■■□ 3.23
COMMD3-201ENST00000376836 LAMB4A4D0S4 1761 aa35.23■■■■□ 3.23
COMMD3-201ENST00000376836 DCAF8L1A6NGE4 600 aa35.23■■■■□ 3.23
COMMD3-201ENST00000376836 NBPF26B4DH59 902 aa35.23■■■■□ 3.23
COMMD3-201ENST00000376836 NBPF10Q6P3W6 841 aaKnown RBP35.23■■■■□ 3.23
COMMD3-201ENST00000376836 NBPF15Q8N660 670 aa35.23■■■■□ 3.23
COMMD3-201ENST00000376836 IL16Q14005 1332 aa35.21■■■■□ 3.23
COMMD3-201ENST00000376836 MIER1Q8N108 512 aa35.21■■■■□ 3.23
COMMD3-201ENST00000376836 HOXB7P09629 217 aa35.2■■■■□ 3.23
COMMD3-201ENST00000376836 MYL6BP14649 208 aa35.2■■■■□ 3.23
COMMD3-201ENST00000376836 WDR63Q8IWG1 891 aa35.2■■■■□ 3.23
COMMD3-201ENST00000376836 CD2APQ9Y5K6 639 aa35.2■■■■□ 3.23
COMMD3-201ENST00000376836 KRT24Q2M2I5 525 aa35.18■■■■□ 3.22
COMMD3-201ENST00000376836 BCL2L12Q9HB09 334 aa35.17■■■■□ 3.22
COMMD3-201ENST00000376836 ZNF652Q9Y2D9 606 aa35.17■■■■□ 3.22
COMMD3-201ENST00000376836 TM4SF1P30408 202 aa35.16■■■■□ 3.22
COMMD3-201ENST00000376836 DUSP27Q5VZP5 1158 aa35.16■■■■□ 3.22
COMMD3-201ENST00000376836 NECTIN2Q92692 538 aa35.16■■■■□ 3.22
COMMD3-201ENST00000376836 CAMTA2O94983 1202 aa35.15■■■■□ 3.22
COMMD3-201ENST00000376836 HDGFL1Q5TGJ6 251 aa35.15■■■■□ 3.22
COMMD3-201ENST00000376836 CHMP4AQ9BY43 222 aa35.15■■■■□ 3.22
COMMD3-201ENST00000376836 KIF6Q6ZMV9 814 aa35.14■■■■□ 3.22
COMMD3-201ENST00000376836 NFIXQ14938 502 aa35.13■■■■□ 3.21
COMMD3-201ENST00000376836 BICDL1Q6ZP65 573 aa35.13■■■■□ 3.21
COMMD3-201ENST00000376836 CLEC4GQ6UXB4 293 aa35.12■■■■□ 3.21
COMMD3-201ENST00000376836 TSR2Q969E8 191 aaKnown RBP35.11■■■■□ 3.21
COMMD3-201ENST00000376836 POLRMTO00411 1230 aaKnown RBP35.1■■■■□ 3.21
COMMD3-201ENST00000376836 ELL2O00472 640 aaPredicted RBP35.1■■■■□ 3.21
COMMD3-201ENST00000376836 RGL2O15211 777 aa35.1■■■■□ 3.21
COMMD3-201ENST00000376836 DDR1Q08345 913 aa35.1■■■■□ 3.21
COMMD3-201ENST00000376836 SETDB2Q96T68 719 aa35.1■■■■□ 3.21
COMMD3-201ENST00000376836 TBC1D9BQ66K14 1250 aa35.09■■■■□ 3.21
COMMD3-201ENST00000376836 DDX21Q9NR30 783 aaKnown RBP eCLIP35.09■■■■□ 3.21
COMMD3-201ENST00000376836 NLGN2Q8NFZ4 835 aa35.08■■■■□ 3.21
COMMD3-201ENST00000376836 PDIA6Q15084 440 aa35.07■■■■□ 3.21
COMMD3-201ENST00000376836 DBF4Q9UBU7 674 aaPredicted RBP35.07■■■■□ 3.21
COMMD3-201ENST00000376836 ERVV-1B6SEH8 477 aa35.06■■■■□ 3.2
COMMD3-201ENST00000376836 SERPINB2P05120 415 aa35.06■■■■□ 3.2
COMMD3-201ENST00000376836 C8orf58Q8NAV2 365 aa35.06■■■■□ 3.2
COMMD3-201ENST00000376836 MYH16Q9H6N6 1097 aa35.06■■■■□ 3.2
COMMD3-201ENST00000376836 SCN7AQ01118 1682 aa35.06■■■■□ 3.2
COMMD3-201ENST00000376836 MAP3K15Q6ZN16 1313 aa35.06■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms