RNA–Protein interactions for RNA: ENST00000376570.8

DDR1-227, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DDR1, Length 3,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-227ENST00000376570 PTPRCP08575 1304 aa14.06□□□□□ -0.16
DDR1-227ENST00000376570 SLC4A8Q2Y0W8 1093 aa14.06□□□□□ -0.16
DDR1-227ENST00000376570 SLFNL1Q499Z3 407 aa14.06□□□□□ -0.16
DDR1-227ENST00000376570 CCDC129Q6ZRS4 1044 aa14.06□□□□□ -0.16
DDR1-227ENST00000376570 KCNH5Q8NCM2 988 aa14.06□□□□□ -0.16
DDR1-227ENST00000376570 ACSBG1Q96GR2 724 aa14.06□□□□□ -0.16
DDR1-227ENST00000376570 IQSEC3Q9UPP2 1182 aaPredicted RBP14.06□□□□□ -0.16
DDR1-227ENST00000376570 SOS1Q07889 1333 aaPredicted RBP14.06□□□□□ -0.16
DDR1-227ENST00000376570 A1BGP04217 495 aa14.05□□□□□ -0.16
DDR1-227ENST00000376570 KIF1BPQ96EK5 621 aa14.05□□□□□ -0.16
DDR1-227ENST00000376570 ZNF594Q96JF6 807 aaPredicted RBP14.05□□□□□ -0.16
DDR1-227ENST00000376570 USP26Q9BXU7 913 aa14.05□□□□□ -0.16
DDR1-227ENST00000376570 PPP6R1Q9UPN7 881 aa14.05□□□□□ -0.16
DDR1-227ENST00000376570 MRE11P49959 708 aa14.05□□□□□ -0.16
DDR1-227ENST00000376570 ATP8B2P98198 1209 aa14.05□□□□□ -0.16
DDR1-227ENST00000376570 FAM184AQ8NB25 1140 aa14.05□□□□□ -0.16
DDR1-227ENST00000376570 ZNF496Q96IT1 587 aaPredicted RBP14.05□□□□□ -0.16
DDR1-227ENST00000376570 BICC1Q9H694 974 aaKnown RBP14.05□□□□□ -0.16
DDR1-227ENST00000376570 ABCA9Q8IUA7 1624 aa14.04□□□□□ -0.16
DDR1-227ENST00000376570 QRICH2Q9H0J4 1663 aa14.04□□□□□ -0.16
DDR1-227ENST00000376570 NUCB2P80303 420 aa14.04□□□□□ -0.16
DDR1-227ENST00000376570 ABCC4O15439 1325 aa14.04□□□□□ -0.16
DDR1-227ENST00000376570 ADGRB3O60242 1522 aa14.04□□□□□ -0.16
DDR1-227ENST00000376570 ESPNB1AK53 854 aa14.04□□□□□ -0.16
DDR1-227ENST00000376570 ZNF853P0CG23 659 aa14.04□□□□□ -0.16
DDR1-227ENST00000376570 GNL2Q13823 731 aaKnown RBP14.04□□□□□ -0.16
DDR1-227ENST00000376570 CCDC82Q8N4S0 544 aa14.04□□□□□ -0.16
DDR1-227ENST00000376570 SPC24Q8NBT2 197 aa14.04□□□□□ -0.16
DDR1-227ENST00000376570 HELBQ8NG08 1087 aaPredicted RBP14.04□□□□□ -0.16
DDR1-227ENST00000376570 IP6K1Q92551 441 aa14.04□□□□□ -0.16
DDR1-227ENST00000376570 ESYT1Q9BSJ8 1104 aa14.04□□□□□ -0.16
DDR1-227ENST00000376570 R3HCC1Q9Y3T6 440 aaKnown RBP14.04□□□□□ -0.16
DDR1-227ENST00000376570 CHGBP05060 677 aa14.03□□□□□ -0.16
DDR1-227ENST00000376570 FAM227BQ96M60 508 aa14.03□□□□□ -0.16
DDR1-227ENST00000376570 RTL1A6NKG5 1358 aa14.03□□□□□ -0.16
DDR1-227ENST00000376570 CPS1P31327 1500 aa14.03□□□□□ -0.16
DDR1-227ENST00000376570 RNMTO43148 476 aaKnown RBP14.03□□□□□ -0.16
DDR1-227ENST00000376570 TIMM10P62072 90 aa14.03□□□□□ -0.16
DDR1-227ENST00000376570 CCT2P78371 535 aaKnown RBP14.03□□□□□ -0.16
DDR1-227ENST00000376570 RRP12Q5JTH9 1297 aaKnown RBP14.03□□□□□ -0.16
DDR1-227ENST00000376570 RUFY2Q8WXA3 655 aa14.03□□□□□ -0.16
DDR1-227ENST00000376570 CREBRFQ8IUR6 639 aa14.03□□□□□ -0.16
DDR1-227ENST00000376570 BICD2Q8TD16 824 aa14.03□□□□□ -0.16
DDR1-227ENST00000376570 MAP3K5Q99683 1374 aa14.03□□□□□ -0.16
DDR1-227ENST00000376570 ZFYVE9O95405 1425 aa14.03□□□□□ -0.16
DDR1-227ENST00000376570 ALKQ9UM73 1620 aa14.03□□□□□ -0.16
DDR1-227ENST00000376570 GOLIM4O00461 696 aa14.02□□□□□ -0.16
DDR1-227ENST00000376570 LMBR1LQ6UX01 489 aa14.02□□□□□ -0.16
DDR1-227ENST00000376570 CCDC24Q8N4L8 307 aa14.02□□□□□ -0.16
DDR1-227ENST00000376570 INO80Q9ULG1 1556 aaPredicted RBP14.02□□□□□ -0.16
DDR1-227ENST00000376570 TTC21AQ8NDW8 1320 aa14.02□□□□□ -0.17
DDR1-227ENST00000376570 ZRSR1Q15695 479 aaKnown RBP14.02□□□□□ -0.17
DDR1-227ENST00000376570 KCNQ4P56696 695 aa14.02□□□□□ -0.17
DDR1-227ENST00000376570 PIBF1Q8WXW3 757 aa14.02□□□□□ -0.17
DDR1-227ENST00000376570 RAB11FIP3O75154 756 aa14.01□□□□□ -0.17
DDR1-227ENST00000376570 CHMLP26374 656 aa14.01□□□□□ -0.17
DDR1-227ENST00000376570 ANKRD13DQ6ZTN6 518 aa14.01□□□□□ -0.17
DDR1-227ENST00000376570 PDRG1Q9NUG6 133 aa14.01□□□□□ -0.17
DDR1-227ENST00000376570 CAMSAP1Q5T5Y3 1602 aa14.01□□□□□ -0.17
DDR1-227ENST00000376570 EIF4A1P60842 406 aaKnown RBP14.01□□□□□ -0.17
DDR1-227ENST00000376570 SUCLG2Q96I99 432 aa14.01□□□□□ -0.17
DDR1-227ENST00000376570 PKNOX2Q96KN3 472 aa14.01□□□□□ -0.17
DDR1-227ENST00000376570 TLR7Q9NYK1 1049 aaKnown RBP14.01□□□□□ -0.17
DDR1-227ENST00000376570 PTPRMP28827 1452 aa14.01□□□□□ -0.17
DDR1-227ENST00000376570 FMNL2Q96PY5 1086 aa14.01□□□□□ -0.17
DDR1-227ENST00000376570 UBE2Q2Q8WVN8 375 aa14□□□□□ -0.17
DDR1-227ENST00000376570 TBC1D2BQ9UPU7 963 aa14□□□□□ -0.17
DDR1-227ENST00000376570 ZNF830Q96NB3 372 aaPredicted RBP14□□□□□ -0.17
DDR1-227ENST00000376570 SBNO1A3KN83 1393 aa14□□□□□ -0.17
DDR1-227ENST00000376570 FRMPD1Q5SYB0 1578 aa13.99□□□□□ -0.17
DDR1-227ENST00000376570 HSP90AB4PQ58FF6 505 aa13.99□□□□□ -0.17
DDR1-227ENST00000376570 GAS2L3Q86XJ1 694 aa13.99□□□□□ -0.17
DDR1-227ENST00000376570 CCDC144CPQ8IYA2 1237 aa13.99□□□□□ -0.17
DDR1-227ENST00000376570 PIK3R4Q99570 1358 aa13.99□□□□□ -0.17
DDR1-227ENST00000376570 FAM135BQ49AJ0 1406 aa13.99□□□□□ -0.17
DDR1-227ENST00000376570 LRRC7Q96NW7 1537 aa13.99□□□□□ -0.17
DDR1-227ENST00000376570 GRM8O00222 908 aa13.99□□□□□ -0.17
DDR1-227ENST00000376570 SEC62Q99442 399 aaKnown RBP13.99□□□□□ -0.17
DDR1-227ENST00000376570 CNNM1Q9NRU3 951 aa13.99□□□□□ -0.17
DDR1-227ENST00000376570 ADGRB1O14514 1584 aa13.99□□□□□ -0.17
DDR1-227ENST00000376570 DIP2CQ9Y2E4 1556 aa13.99□□□□□ -0.17
DDR1-227ENST00000376570 USP6P35125 1406 aa13.99□□□□□ -0.17
DDR1-227ENST00000376570 AKAP4Q5JQC9 854 aa13.99□□□□□ -0.17
DDR1-227ENST00000376570 LARP1BQ659C4 914 aaKnown RBP13.99□□□□□ -0.17
DDR1-227ENST00000376570 CYP46A1Q9Y6A2 500 aa13.99□□□□□ -0.17
DDR1-227ENST00000376570 IDH1O75874 414 aaKnown RBP13.98□□□□□ -0.17
DDR1-227ENST00000376570 ECHDC1Q9NTX5 307 aa13.98□□□□□ -0.17
DDR1-227ENST00000376570 CNPY2Q9Y2B0 182 aa13.98□□□□□ -0.17
DDR1-227ENST00000376570 CKAP2LQ8IYA6 745 aa13.98□□□□□ -0.17
DDR1-227ENST00000376570 FAM89AQ96GI7 184 aa13.98□□□□□ -0.17
DDR1-227ENST00000376570 TFCP2Q12800 502 aa13.98□□□□□ -0.17
DDR1-227ENST00000376570 SF3A1Q15459 793 aaKnown RBP13.98□□□□□ -0.17
DDR1-227ENST00000376570 NEXMIFQ5QGS0 1516 aa13.98□□□□□ -0.17
DDR1-227ENST00000376570 JAG2Q9Y219 1238 aa13.97□□□□□ -0.17
DDR1-227ENST00000376570 GLRX3O76003 335 aaKnown RBP13.97□□□□□ -0.17
DDR1-227ENST00000376570 NMIQ13287 307 aaPredicted RBP13.97□□□□□ -0.17
DDR1-227ENST00000376570 IFNL2Q8IZJ0 200 aa13.97□□□□□ -0.17
DDR1-227ENST00000376570 ANTXR1Q9H6X2 564 aa13.97□□□□□ -0.17
DDR1-227ENST00000376570 ZNF790Q6PG37 636 aa13.97□□□□□ -0.17
DDR1-227ENST00000376570 LARP1Q6PKG0 1096 aaKnown RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms