RNA–Protein interactions for RNA: ENST00000376238.4

SLC28A3-201, Transcript of solute carrier family 28 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A3, Length 4,887 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A3-201ENST00000376238 GRIPAP1Q4V328 841 aa6.73□□□□□ -1.33
SLC28A3-201ENST00000376238 PPLO60437 1756 aa6.73□□□□□ -1.33
SLC28A3-201ENST00000376238 KNDC1Q76NI1 1749 aa6.73□□□□□ -1.33
SLC28A3-201ENST00000376238 APBA3O96018 575 aa6.72□□□□□ -1.33
SLC28A3-201ENST00000376238 ANKRD13AQ8IZ07 590 aa6.72□□□□□ -1.33
SLC28A3-201ENST00000376238 FOXD4L1Q9NU39 408 aa6.72□□□□□ -1.33
SLC28A3-201ENST00000376238 GNAT3A8MTJ3 354 aa6.72□□□□□ -1.33
SLC28A3-201ENST00000376238 GIMAP7Q8NHV1 300 aa6.72□□□□□ -1.33
SLC28A3-201ENST00000376238 INSRP06213 1382 aa6.72□□□□□ -1.33
SLC28A3-201ENST00000376238 AKAP4Q5JQC9 854 aa6.72□□□□□ -1.33
SLC28A3-201ENST00000376238 LIMCH1Q9UPQ0 1083 aa6.72□□□□□ -1.33
SLC28A3-201ENST00000376238 FNBP4Q8N3X1 1017 aaPredicted RBP6.72□□□□□ -1.33
SLC28A3-201ENST00000376238 DNAJC2Q99543 621 aaKnown RBP6.72□□□□□ -1.33
SLC28A3-201ENST00000376238 BIN2Q9UBW5 565 aaPredicted RBP6.72□□□□□ -1.33
SLC28A3-201ENST00000376238 SALL2Q9Y467 1007 aaPredicted RBP6.72□□□□□ -1.33
SLC28A3-201ENST00000376238 CDK12Q9NYV4 1490 aaPredicted RBP6.71□□□□□ -1.33
SLC28A3-201ENST00000376238 AHDC1Q5TGY3 1603 aaPredicted RBP6.71□□□□□ -1.33
SLC28A3-201ENST00000376238 RBM33Q96EV2 1170 aaKnown RBP6.71□□□□□ -1.33
SLC28A3-201ENST00000376238 FMNL2Q96PY5 1086 aa6.71□□□□□ -1.33
SLC28A3-201ENST00000376238 ZHX3Q9H4I2 956 aa6.71□□□□□ -1.33
SLC28A3-201ENST00000376238 CT47B1P0C2W7 299 aaPredicted RBP6.71□□□□□ -1.34
SLC28A3-201ENST00000376238 ABCC6O95255 1503 aa6.71□□□□□ -1.34
SLC28A3-201ENST00000376238 GOLGA6L9A6NEM1 432 aa6.71□□□□□ -1.34
SLC28A3-201ENST00000376238 ARHGEF25Q86VW2 580 aa6.71□□□□□ -1.34
SLC28A3-201ENST00000376238 NYXQ9GZU5 481 aa6.71□□□□□ -1.34
SLC28A3-201ENST00000376238 CCDC87Q9NVE4 849 aa6.71□□□□□ -1.34
SLC28A3-201ENST00000376238 TRIM6-TRIM34B2RNG4 842 aa6.71□□□□□ -1.34
SLC28A3-201ENST00000376238 ADRA2BP18089 450 aa6.71□□□□□ -1.34
SLC28A3-201ENST00000376238 JAKMIP3Q5VZ66 844 aa6.71□□□□□ -1.34
SLC28A3-201ENST00000376238 RBM42Q9BTD8 480 aaKnown RBP6.71□□□□□ -1.34
SLC28A3-201ENST00000376238 TRIM34Q9BYJ4 488 aa6.71□□□□□ -1.34
SLC28A3-201ENST00000376238 CHMP2AO43633 222 aa6.7□□□□□ -1.34
SLC28A3-201ENST00000376238 FAM98CQ17RN3 349 aaKnown RBP6.7□□□□□ -1.34
SLC28A3-201ENST00000376238 FOXD4L6Q3SYB3 417 aaPredicted RBP6.7□□□□□ -1.34
SLC28A3-201ENST00000376238 FOXD4L3Q6VB84 417 aaPredicted RBP6.7□□□□□ -1.34
SLC28A3-201ENST00000376238 NME9Q86XW9 330 aa6.7□□□□□ -1.34
SLC28A3-201ENST00000376238 ADGRB2O60241 1585 aa6.7□□□□□ -1.34
SLC28A3-201ENST00000376238 ST5P78524 1137 aa6.7□□□□□ -1.34
SLC28A3-201ENST00000376238 RTCBQ9Y3I0 505 aaKnown RBP6.7□□□□□ -1.34
SLC28A3-201ENST00000376238 PARP3Q9Y6F1 533 aa6.7□□□□□ -1.34
SLC28A3-201ENST00000376238 PHLPP1O60346 1717 aa6.7□□□□□ -1.34
SLC28A3-201ENST00000376238 PEX14O75381 377 aa6.7□□□□□ -1.34
SLC28A3-201ENST00000376238 BECN1Q14457 450 aa6.7□□□□□ -1.34
SLC28A3-201ENST00000376238 USP19O94966 1318 aa6.7□□□□□ -1.34
SLC28A3-201ENST00000376238 KIAA0232Q92628 1395 aa6.7□□□□□ -1.34
SLC28A3-201ENST00000376238 HOXC9P31274 260 aa6.7□□□□□ -1.34
SLC28A3-201ENST00000376238 RFC4P35249 363 aa6.7□□□□□ -1.34
SLC28A3-201ENST00000376238 HDAC1Q13547 482 aaPredicted RBP6.7□□□□□ -1.34
SLC28A3-201ENST00000376238 WDR75Q8IWA0 830 aaKnown RBP6.7□□□□□ -1.34
SLC28A3-201ENST00000376238 RFX1P22670 979 aa6.69□□□□□ -1.34
SLC28A3-201ENST00000376238 MFAP1P55081 439 aaKnown RBP6.69□□□□□ -1.34
SLC28A3-201ENST00000376238 LRRFIP1Q32MZ4 808 aaKnown RBP6.69□□□□□ -1.34
SLC28A3-201ENST00000376238 RUFY1Q96T51 708 aa6.69□□□□□ -1.34
SLC28A3-201ENST00000376238 SMC4Q9NTJ3 1288 aa6.69□□□□□ -1.34
SLC28A3-201ENST00000376238 KIF7Q2M1P5 1343 aa6.69□□□□□ -1.34
SLC28A3-201ENST00000376238 CHRNA2Q15822 529 aa6.69□□□□□ -1.34
SLC28A3-201ENST00000376238 CCDC30Q5VVM6 783 aa6.69□□□□□ -1.34
SLC28A3-201ENST00000376238 BANK1Q8NDB2 785 aa6.69□□□□□ -1.34
SLC28A3-201ENST00000376238 WDR66Q8TBY9 1149 aa6.69□□□□□ -1.34
SLC28A3-201ENST00000376238 INCENPQ9NQS7 918 aa6.69□□□□□ -1.34
SLC28A3-201ENST00000376238 MTMR7Q9Y216 660 aa6.69□□□□□ -1.34
SLC28A3-201ENST00000376238 PTPRUQ92729 1446 aa6.69□□□□□ -1.34
SLC28A3-201ENST00000376238 LIG1P18858 919 aa6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 INF2Q27J81 1249 aa6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 SULT6B1Q6IMI4 303 aa6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 NLGN1Q8N2Q7 840 aa6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 SPON1Q9HCB6 807 aa6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 FRMD4BQ9Y2L6 1034 aa6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 SPATA31A5Q5VU36 1347 aa6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 SPATA31A7Q8IWB4 1347 aa6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 SOCS7O14512 581 aa6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 HSP90AB2PQ58FF8 381 aa6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 TFCP2L1Q9NZI6 479 aa6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 CPSF2Q9P2I0 782 aaKnown RBP6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 ERBB4Q15303 1308 aa6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 GRIN3BO60391 1043 aa6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 HNRNPUQ00839 825 aaKnown RBP eCLIP6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 CCDC173Q0VFZ6 552 aa6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 C16orf71Q8IYS4 520 aaPredicted RBP6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 A0A1W2PP64 1363 aa6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 LTBP4Q8N2S1 1624 aa6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 CERS3Q8IU89 383 aa6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 RNF168Q8IYW5 571 aaPredicted RBP6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 PLEKHH1Q9ULM0 1364 aa6.68□□□□□ -1.34
SLC28A3-201ENST00000376238 CHD2O14647 1828 aaKnown RBP6.67□□□□□ -1.34
SLC28A3-201ENST00000376238 ATP6V1E1P36543 226 aa6.67□□□□□ -1.34
SLC28A3-201ENST00000376238 CCDC27Q2M243 656 aa6.67□□□□□ -1.34
SLC28A3-201ENST00000376238 PPP4R3CPQ6ZMV5 832 aa6.67□□□□□ -1.34
SLC28A3-201ENST00000376238 PPP1R42Q7Z4L9 355 aa6.67□□□□□ -1.34
SLC28A3-201ENST00000376238 TSPYL4Q9UJ04 414 aa6.67□□□□□ -1.34
SLC28A3-201ENST00000376238 CCNL1Q9UK58 526 aaPredicted RBP6.67□□□□□ -1.34
SLC28A3-201ENST00000376238 CPSF1Q10570 1443 aaKnown RBP6.67□□□□□ -1.34
SLC28A3-201ENST00000376238 NCAPD2Q15021 1401 aa6.67□□□□□ -1.34
SLC28A3-201ENST00000376238 SUPT20HQ8NEM7 779 aa6.67□□□□□ -1.34
SLC28A3-201ENST00000376238 PLIN1O60240 522 aa6.67□□□□□ -1.34
SLC28A3-201ENST00000376238 SF3A1Q15459 793 aaKnown RBP6.67□□□□□ -1.34
SLC28A3-201ENST00000376238 TRAPPC3LQ5T215 181 aa6.67□□□□□ -1.34
SLC28A3-201ENST00000376238 RPAINQ86UA6 219 aa6.67□□□□□ -1.34
SLC28A3-201ENST00000376238 XRN1Q8IZH2 1706 aaKnown RBP6.67□□□□□ -1.34
SLC28A3-201ENST00000376238 IPO4Q8TEX9 1081 aaKnown RBP6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms