RNA–Protein interactions for RNA: ENST00000374767.4

NIPSNAP3A-201, Transcript of nipsnap homolog 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPSNAP3A, Length 1,633 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPSNAP3A-201ENST00000374767 PROSER3Q2NL68 480 aa17.36■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 ERBB4Q15303 1308 aa17.36■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 UBTFL1P0CB47 393 aaPredicted RBP17.36■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 LRP10Q7Z4F1 713 aa17.36■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 ANXA1P04083 346 aa17.35■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 HDAC5Q9UQL6 1122 aa17.35■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 COL16A1Q07092 1604 aaPredicted RBP17.34■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 LINS1Q8NG48 757 aa17.33■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 SSH3Q8TE77 659 aa17.33■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 DDRGK1Q96HY6 314 aa17.33■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 CDCA7Q9BWT1 371 aaPredicted RBP17.33■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 MAP3K2Q9Y2U5 619 aa17.33■□□□□ 0.37
NIPSNAP3A-201ENST00000374767 UTYO14607 1347 aa17.33■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 TNS2Q63HR2 1409 aa17.33■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 PLEKHM2Q8IWE5 1019 aa17.32■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 USP16Q9Y5T5 823 aa17.32■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 LRRFIP2Q9Y608 721 aaKnown RBP17.32■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 SEC24BO95487 1268 aa17.32■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 MTX1Q13505 466 aa17.32■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 POLA2Q14181 598 aa17.32■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 DDX54Q8TDD1 881 aaKnown RBP17.32■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 ZBTB47Q9UFB7 747 aaPredicted RBP17.32■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 THRAP3Q9Y2W1 955 aaKnown RBP17.32■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 NPM2Q86SE8 214 aaKnown RBP17.31■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 SHANK3Q9BYB0 1731 aa17.31■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 PNMA6EA0A0J9YXQ4 647 aa17.3■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 OSBPL3Q9H4L5 887 aa17.3■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 GLI3P10071 1580 aa17.3■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 NBPF7P0C2Y1 421 aaPredicted RBP17.29■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 UPF2Q9HAU5 1272 aaKnown RBP17.29■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 COPS6Q7L5N1 327 aa17.29■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 VSIG10Q8N0Z9 540 aa17.29■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 NOP58Q9Y2X3 529 aaKnown RBP17.29■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 KCPQ6ZWJ8 1503 aa17.28■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 EIF5BO60841 1220 aaKnown RBP17.28■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 RAB11FIP3O75154 756 aa17.28■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 ANKRD13DQ6ZTN6 518 aa17.28■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 XAGE3Q8WTP9 111 aa17.28■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 TBC1D32Q96NH3 1257 aa17.28■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 METTL22Q9BUU2 404 aaPredicted RBP17.28■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 USP35Q9P2H5 1018 aa17.28■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 PHLPP1O60346 1717 aa17.27■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 EXOC5O00471 708 aa17.27■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 RIC3Q7Z5B4 369 aa17.27■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 TMOD3Q9NYL9 352 aa17.27■□□□□ 0.36
NIPSNAP3A-201ENST00000374767 PAPPAQ13219 1627 aa17.27■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 C5P01031 1676 aa17.27■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 PLCH1Q4KWH8 1693 aa17.27■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 PPP1R42Q7Z4L9 355 aa17.26■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 TEX13AQ9BXU3 409 aaPredicted RBP17.26■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 LRRCC1Q9C099 1032 aa17.26■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 SPATA31A1Q5TZJ5 1347 aa17.26■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 UBR2Q8IWV8 1755 aa17.26■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 LRP6O75581 1613 aa17.26■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 GRM8O00222 908 aa17.25■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 IGKV5-2P06315 115 aa17.25■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 NEXNQ0ZGT2 675 aa17.25■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 TTC22Q5TAA0 569 aa17.25■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 C9orf78Q9NZ63 289 aaPredicted RBP17.25■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 SALL3Q9BXA9 1300 aa17.25■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 MYL6BP14649 208 aa17.25■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 AIMP1Q12904 312 aaKnown RBP17.25■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 HSP90AB4PQ58FF6 505 aa17.25■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 C16orf71Q8IYS4 520 aaPredicted RBP17.25■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 PLBD2Q8NHP8 589 aa17.25■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 COL15A1P39059 1388 aa17.24■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 SLIT2O94813 1529 aa17.24■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 NEURL1BA8MQ27 555 aa17.24■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 GSPT1P15170 499 aaKnown RBP17.24■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 CWF19L2Q2TBE0 894 aaKnown RBP17.24■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 PIGBQ92521 554 aa17.24■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 EXOC6BQ9Y2D4 811 aa17.24■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 NBPF26B4DH59 902 aa17.23■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 SRGAP3O43295 1099 aa17.23■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 GCKRQ14397 625 aa17.23■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 NBPF14Q5TI25 921 aa17.23■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 NBPF10Q6P3W6 841 aaKnown RBP17.23■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 BARGINQ6ZT62 677 aa17.23■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 NBPF15Q8N660 670 aa17.23■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 STAP2Q9UGK3 403 aa17.23■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 LAMB4A4D0S4 1761 aa17.22■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 SMARCA5O60264 1052 aaPredicted RBP17.22■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 ADAMTS2O95450 1211 aa17.22■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 SPATA31A5Q5VU36 1347 aa17.22■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 SPATA31A7Q8IWB4 1347 aa17.22■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 BCL9O00512 1426 aa17.22■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 PDE1AP54750 535 aa17.21■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 PIP4K2BP78356 416 aa17.21■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 ATG3Q9NT62 314 aa17.21■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 UBAP1LF5GYI3 381 aa17.21■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 CDC45O75419 566 aa17.21■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 AOX1Q06278 1338 aa17.21■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 OTUD7AQ8TE49 926 aaPredicted RBP17.21■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 KIF1BPQ96EK5 621 aa17.21■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 KAZALD1Q96I82 304 aa17.21■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 TOGARAM1Q9Y4F4 1720 aa17.21■□□□□ 0.35
NIPSNAP3A-201ENST00000374767 NRAPQ86VF7 1730 aa17.2■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 PTCD1O75127 700 aaKnown RBP17.2■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 SURF6O75683 361 aaKnown RBP17.2■□□□□ 0.34
NIPSNAP3A-201ENST00000374767 TBC1D9Q6ZT07 1266 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms