RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 AK7Q96M32 723 aa19.5■□□□□ 0.71
HSPG2-201ENST00000374673 USP16Q9Y5T5 823 aa19.5■□□□□ 0.71
HSPG2-201ENST00000374673 FANCIQ9NVI1 1328 aa19.5■□□□□ 0.71
HSPG2-201ENST00000374673 MYH16Q9H6N6 1097 aa19.49■□□□□ 0.71
HSPG2-201ENST00000374673 CASZ1Q86V15 1759 aa19.48■□□□□ 0.71
HSPG2-201ENST00000374673 HOXB7P09629 217 aa19.48■□□□□ 0.71
HSPG2-201ENST00000374673 KRT24Q2M2I5 525 aa19.48■□□□□ 0.71
HSPG2-201ENST00000374673 INTS5Q6P9B9 1019 aaKnown RBP19.48■□□□□ 0.71
HSPG2-201ENST00000374673 CCDC87Q9NVE4 849 aa19.48■□□□□ 0.71
HSPG2-201ENST00000374673 ZBED9Q6R2W3 1325 aa19.48■□□□□ 0.71
HSPG2-201ENST00000374673 E9PSI1 815 aa19.47■□□□□ 0.71
HSPG2-201ENST00000374673 TFCP2L1Q9NZI6 479 aa19.47■□□□□ 0.71
HSPG2-201ENST00000374673 C4AP0C0L4 1744 aa19.46■□□□□ 0.71
HSPG2-201ENST00000374673 GNPATO15228 680 aa19.46■□□□□ 0.71
HSPG2-201ENST00000374673 RPS6KA4O75676 772 aa19.46■□□□□ 0.71
HSPG2-201ENST00000374673 SLFN5Q08AF3 891 aa19.46■□□□□ 0.71
HSPG2-201ENST00000374673 ZBTB1Q9Y2K1 713 aa19.46■□□□□ 0.71
HSPG2-201ENST00000374673 SOS1Q07889 1333 aaPredicted RBP19.46■□□□□ 0.71
HSPG2-201ENST00000374673 SSFA2P28290 1259 aa19.45■□□□□ 0.7
HSPG2-201ENST00000374673 R3HDM1Q15032 1099 aaKnown RBP19.45■□□□□ 0.7
HSPG2-201ENST00000374673 DUSP27Q5VZP5 1158 aa19.45■□□□□ 0.7
HSPG2-201ENST00000374673 RTCBQ9Y3I0 505 aaKnown RBP19.45■□□□□ 0.7
HSPG2-201ENST00000374673 PNPLA7Q6ZV29 1317 aa19.45■□□□□ 0.7
HSPG2-201ENST00000374673 AMIGO3Q86WK7 504 aa19.44■□□□□ 0.7
HSPG2-201ENST00000374673 C8orf58Q8NAV2 365 aa19.44■□□□□ 0.7
HSPG2-201ENST00000374673 FLAD1Q8NFF5 587 aa19.44■□□□□ 0.7
HSPG2-201ENST00000374673 CDCA7LQ96GN5 454 aa19.44■□□□□ 0.7
HSPG2-201ENST00000374673 ERBB4Q15303 1308 aa19.44■□□□□ 0.7
HSPG2-201ENST00000374673 A1BGP04217 495 aa19.43■□□□□ 0.7
HSPG2-201ENST00000374673 ADRA2BP18089 450 aa19.43■□□□□ 0.7
HSPG2-201ENST00000374673 TRMT2AQ8IZ69 625 aaKnown RBP19.43■□□□□ 0.7
HSPG2-201ENST00000374673 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.42■□□□□ 0.7
HSPG2-201ENST00000374673 PSDA5PKW4 1024 aaPredicted RBP19.42■□□□□ 0.7
HSPG2-201ENST00000374673 CANXP27824 592 aaKnown RBP19.42■□□□□ 0.7
HSPG2-201ENST00000374673 IL6STP40189 918 aaPredicted RBP19.42■□□□□ 0.7
HSPG2-201ENST00000374673 TSPYL6Q8N831 410 aa19.42■□□□□ 0.7
HSPG2-201ENST00000374673 EIF2S2P20042 333 aaKnown RBP19.41■□□□□ 0.7
HSPG2-201ENST00000374673 EIF5P55010 431 aaKnown RBP19.41■□□□□ 0.7
HSPG2-201ENST00000374673 EXOSC9Q06265 439 aaKnown RBP19.41■□□□□ 0.7
HSPG2-201ENST00000374673 TWISTNBQ3B726 338 aaPredicted RBP19.41■□□□□ 0.7
HSPG2-201ENST00000374673 COL15A1P39059 1388 aa19.41■□□□□ 0.7
HSPG2-201ENST00000374673 NBPF26B4DH59 902 aa19.4■□□□□ 0.7
HSPG2-201ENST00000374673 ELL2O00472 640 aaPredicted RBP19.4■□□□□ 0.7
HSPG2-201ENST00000374673 PHF14O94880 888 aa19.4■□□□□ 0.7
HSPG2-201ENST00000374673 TRAPPC3LQ5T215 181 aa19.4■□□□□ 0.7
HSPG2-201ENST00000374673 HDGFL1Q5TGJ6 251 aa19.4■□□□□ 0.7
HSPG2-201ENST00000374673 NBPF10Q6P3W6 841 aaKnown RBP19.4■□□□□ 0.7
HSPG2-201ENST00000374673 COL23A1Q86Y22 540 aaPredicted RBP19.4■□□□□ 0.7
HSPG2-201ENST00000374673 NBPF15Q8N660 670 aa19.4■□□□□ 0.7
HSPG2-201ENST00000374673 CHMP4AQ9BY43 222 aa19.4■□□□□ 0.7
HSPG2-201ENST00000374673 SMIM5Q71RC9 77 aa19.39■□□□□ 0.69
HSPG2-201ENST00000374673 COL24A1Q17RW2 1714 aa19.39■□□□□ 0.69
HSPG2-201ENST00000374673 BCORQ6W2J9 1755 aa19.39■□□□□ 0.69
HSPG2-201ENST00000374673 CACNA1FO60840 1977 aa19.39■□□□□ 0.69
HSPG2-201ENST00000374673 PIP4K2AP48426 406 aaPredicted RBP19.38■□□□□ 0.69
HSPG2-201ENST00000374673 SCN7AQ01118 1682 aa19.38■□□□□ 0.69
HSPG2-201ENST00000374673 PDIA6Q15084 440 aa19.38■□□□□ 0.69
HSPG2-201ENST00000374673 ARHGEF1Q92888 912 aaKnown RBP19.38■□□□□ 0.69
HSPG2-201ENST00000374673 VAMP4O75379 141 aa19.37■□□□□ 0.69
HSPG2-201ENST00000374673 SLC16A10Q8TF71 515 aa19.37■□□□□ 0.69
HSPG2-201ENST00000374673 NECTIN2Q92692 538 aa19.37■□□□□ 0.69
HSPG2-201ENST00000374673 PDGFDQ9GZP0 370 aaPredicted RBP19.37■□□□□ 0.69
HSPG2-201ENST00000374673 A0A087WZG4 1122 aa19.36■□□□□ 0.69
HSPG2-201ENST00000374673 CCDC30Q5VVM6 783 aa19.36■□□□□ 0.69
HSPG2-201ENST00000374673 LRP10Q7Z4F1 713 aa19.36■□□□□ 0.69
HSPG2-201ENST00000374673 DDX21Q9NR30 783 aaKnown RBP eCLIP19.36■□□□□ 0.69
HSPG2-201ENST00000374673 DBF4Q9UBU7 674 aaPredicted RBP19.36■□□□□ 0.69
HSPG2-201ENST00000374673 RFC4P35249 363 aa19.35■□□□□ 0.69
HSPG2-201ENST00000374673 NPM2Q86SE8 214 aaKnown RBP19.35■□□□□ 0.69
HSPG2-201ENST00000374673 CHPF2Q9P2E5 772 aa19.35■□□□□ 0.69
HSPG2-201ENST00000374673 ZNF330Q9Y3S2 320 aaPredicted RBP19.35■□□□□ 0.69
HSPG2-201ENST00000374673 USP42Q9H9J4 1324 aaKnown RBP19.34■□□□□ 0.69
HSPG2-201ENST00000374673 MSH5O43196 834 aa19.34■□□□□ 0.69
HSPG2-201ENST00000374673 MYL6BP14649 208 aa19.34■□□□□ 0.69
HSPG2-201ENST00000374673 PROSER3Q2NL68 480 aa19.34■□□□□ 0.69
HSPG2-201ENST00000374673 NARFQ9UHQ1 456 aa19.34■□□□□ 0.69
HSPG2-201ENST00000374673 ANXA1P04083 346 aa19.33■□□□□ 0.68
HSPG2-201ENST00000374673 CT47B1P0C2W7 299 aaPredicted RBP19.33■□□□□ 0.68
HSPG2-201ENST00000374673 DZIP3Q86Y13 1208 aaKnown RBP19.32■□□□□ 0.68
HSPG2-201ENST00000374673 MTFR1LQ9H019 292 aa19.32■□□□□ 0.68
HSPG2-201ENST00000374673 HYPKQ9NX55 129 aa19.32■□□□□ 0.68
HSPG2-201ENST00000374673 ZPR1O75312 459 aa19.31■□□□□ 0.68
HSPG2-201ENST00000374673 ZNF428Q96B54 188 aa19.31■□□□□ 0.68
HSPG2-201ENST00000374673 STK31Q9BXU1 1019 aa19.31■□□□□ 0.68
HSPG2-201ENST00000374673 SRP68Q9UHB9 627 aaKnown RBP19.31■□□□□ 0.68
HSPG2-201ENST00000374673 TBC1D2BQ9UPU7 963 aa19.31■□□□□ 0.68
HSPG2-201ENST00000374673 NUP98P52948 1817 aa19.3■□□□□ 0.68
HSPG2-201ENST00000374673 RGL2O15211 777 aa19.3■□□□□ 0.68
HSPG2-201ENST00000374673 GYS1P13807 737 aa19.3■□□□□ 0.68
HSPG2-201ENST00000374673 USPL1Q5W0Q7 1092 aa19.3■□□□□ 0.68
HSPG2-201ENST00000374673 YTHDC1Q96MU7 727 aaKnown RBP19.3■□□□□ 0.68
HSPG2-201ENST00000374673 CAMTA2O94983 1202 aa19.29■□□□□ 0.68
HSPG2-201ENST00000374673 ZBTB7AO95365 584 aa19.29■□□□□ 0.68
HSPG2-201ENST00000374673 TTLL7Q6ZT98 887 aa19.29■□□□□ 0.68
HSPG2-201ENST00000374673 BCL2L12Q9HB09 334 aa19.29■□□□□ 0.68
HSPG2-201ENST00000374673 KIF6Q6ZMV9 814 aa19.28■□□□□ 0.68
HSPG2-201ENST00000374673 COPS6Q7L5N1 327 aa19.28■□□□□ 0.68
HSPG2-201ENST00000374673 XAGE3Q8WTP9 111 aa19.28■□□□□ 0.68
HSPG2-201ENST00000374673 ARFGEF2Q9Y6D5 1785 aa19.28■□□□□ 0.68
HSPG2-201ENST00000374673 LRP5O75197 1615 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms