RNA–Protein interactions for RNA: ENST00000373831.7

RCC1-201, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 1 (best) BASIC

Gene RCC1, Length 1,577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-201ENST00000373831 RREB1Q92766 1687 aa18.62■□□□□ 0.57
RCC1-201ENST00000373831 PTCD1O75127 700 aaKnown RBP18.61■□□□□ 0.57
RCC1-201ENST00000373831 EIF2S2P20042 333 aaKnown RBP18.61■□□□□ 0.57
RCC1-201ENST00000373831 FKBP8Q14318 412 aa18.61■□□□□ 0.57
RCC1-201ENST00000373831 HDGFL1Q5TGJ6 251 aa18.61■□□□□ 0.57
RCC1-201ENST00000373831 CCDC30Q5VVM6 783 aa18.61■□□□□ 0.57
RCC1-201ENST00000373831 SNRPA1P09661 255 aaKnown RBP18.6■□□□□ 0.57
RCC1-201ENST00000373831 NUP188Q5SRE5 1749 aa18.6■□□□□ 0.57
RCC1-201ENST00000373831 CICQ96RK0 1608 aaPredicted RBP18.6■□□□□ 0.57
RCC1-201ENST00000373831 NEFLP07196 543 aa18.59■□□□□ 0.57
RCC1-201ENST00000373831 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.59■□□□□ 0.57
RCC1-201ENST00000373831 USP16Q9Y5T5 823 aa18.59■□□□□ 0.57
RCC1-201ENST00000373831 KIF16BQ96L93 1317 aa18.59■□□□□ 0.57
RCC1-201ENST00000373831 PLSCR1O15162 318 aa18.59■□□□□ 0.57
RCC1-201ENST00000373831 SLC4A2P04920 1241 aa18.59■□□□□ 0.57
RCC1-201ENST00000373831 G2E3Q7L622 706 aa18.59■□□□□ 0.57
RCC1-201ENST00000373831 SLC4A9Q96Q91 983 aa18.59■□□□□ 0.57
RCC1-201ENST00000373831 BCL11BQ9C0K0 894 aaPredicted RBP18.59■□□□□ 0.57
RCC1-201ENST00000373831 LY75O60449 1722 aa18.58■□□□□ 0.56
RCC1-201ENST00000373831 TRIM27P14373 513 aa18.58■□□□□ 0.56
RCC1-201ENST00000373831 ZNF831Q5JPB2 1677 aa18.58■□□□□ 0.56
RCC1-201ENST00000373831 ZKSCAN2Q63HK3 967 aa18.58■□□□□ 0.56
RCC1-201ENST00000373831 CHPF2Q9P2E5 772 aa18.58■□□□□ 0.56
RCC1-201ENST00000373831 RLBP1P12271 317 aa18.57■□□□□ 0.56
RCC1-201ENST00000373831 CANXP27824 592 aaKnown RBP18.57■□□□□ 0.56
RCC1-201ENST00000373831 STK31Q9BXU1 1019 aa18.57■□□□□ 0.56
RCC1-201ENST00000373831 PDIA6Q15084 440 aa18.56■□□□□ 0.56
RCC1-201ENST00000373831 PROSER3Q2NL68 480 aa18.56■□□□□ 0.56
RCC1-201ENST00000373831 ATF7IPQ6VMQ6 1270 aa18.56■□□□□ 0.56
RCC1-201ENST00000373831 PANK1Q8TE04 598 aa18.56■□□□□ 0.56
RCC1-201ENST00000373831 COL5A3P25940 1745 aaPredicted RBP18.56■□□□□ 0.56
RCC1-201ENST00000373831 PALLDQ8WX93 1383 aa18.56■□□□□ 0.56
RCC1-201ENST00000373831 N4BP2Q86UW6 1770 aaPredicted RBP18.56■□□□□ 0.56
RCC1-201ENST00000373831 ANXA1P04083 346 aa18.55■□□□□ 0.56
RCC1-201ENST00000373831 PDE3AQ14432 1141 aa18.55■□□□□ 0.56
RCC1-201ENST00000373831 VSIG10Q8N0Z9 540 aa18.55■□□□□ 0.56
RCC1-201ENST00000373831 ARHGAP45Q92619 1136 aa18.55■□□□□ 0.56
RCC1-201ENST00000373831 RBM42Q9BTD8 480 aaKnown RBP18.55■□□□□ 0.56
RCC1-201ENST00000373831 CLUAP1Q96AJ1 413 aa18.55■□□□□ 0.56
RCC1-201ENST00000373831 CRBNQ96SW2 442 aa18.55■□□□□ 0.56
RCC1-201ENST00000373831 PHAXQ9H814 394 aaKnown RBP18.55■□□□□ 0.56
RCC1-201ENST00000373831 SPON1Q9HCB6 807 aa18.55■□□□□ 0.56
RCC1-201ENST00000373831 ANO8Q9HCE9 1232 aaPredicted RBP18.55■□□□□ 0.56
RCC1-201ENST00000373831 IPO8O15397 1037 aaKnown RBP18.54■□□□□ 0.56
RCC1-201ENST00000373831 PROM2Q8N271 834 aa18.54■□□□□ 0.56
RCC1-201ENST00000373831 DBF4Q9UBU7 674 aaPredicted RBP18.54■□□□□ 0.56
RCC1-201ENST00000373831 MYH14Q7Z406 1995 aaKnown RBP18.54■□□□□ 0.56
RCC1-201ENST00000373831 DNAJC10Q8IXB1 793 aa18.53■□□□□ 0.56
RCC1-201ENST00000373831 EXOC6Q8TAG9 804 aa18.53■□□□□ 0.56
RCC1-201ENST00000373831 CHMP4AQ9BY43 222 aa18.53■□□□□ 0.56
RCC1-201ENST00000373831 DDX21Q9NR30 783 aaKnown RBP eCLIP18.53■□□□□ 0.56
RCC1-201ENST00000373831 TAF1LQ8IZX4 1826 aa18.53■□□□□ 0.56
RCC1-201ENST00000373831 PIP4K2AP48426 406 aaPredicted RBP18.52■□□□□ 0.56
RCC1-201ENST00000373831 FLIIQ13045 1269 aa18.52■□□□□ 0.56
RCC1-201ENST00000373831 LRP10Q7Z4F1 713 aa18.52■□□□□ 0.56
RCC1-201ENST00000373831 DZIP1LQ8IYY4 767 aaKnown RBP18.52■□□□□ 0.56
RCC1-201ENST00000373831 PPP1R1BQ9UD71 204 aaPredicted RBP18.52■□□□□ 0.56
RCC1-201ENST00000373831 PTPRCP08575 1304 aa18.52■□□□□ 0.55
RCC1-201ENST00000373831 NBPF26B4DH59 902 aa18.51■□□□□ 0.55
RCC1-201ENST00000373831 NBPF10Q6P3W6 841 aaKnown RBP18.51■□□□□ 0.55
RCC1-201ENST00000373831 NBPF15Q8N660 670 aa18.51■□□□□ 0.55
RCC1-201ENST00000373831 SMARCC1Q92922 1105 aaPredicted RBP18.51■□□□□ 0.55
RCC1-201ENST00000373831 ABCC4O15439 1325 aa18.51■□□□□ 0.55
RCC1-201ENST00000373831 LOC102724428A0A0B4J2F2 783 aa18.51■□□□□ 0.55
RCC1-201ENST00000373831 A1BGP04217 495 aa18.51■□□□□ 0.55
RCC1-201ENST00000373831 SIK1P57059 783 aa18.51■□□□□ 0.55
RCC1-201ENST00000373831 COG6Q9Y2V7 657 aa18.51■□□□□ 0.55
RCC1-201ENST00000373831 API5Q9BZZ5 524 aaKnown RBP18.5■□□□□ 0.55
RCC1-201ENST00000373831 ERBB4Q15303 1308 aa18.49■□□□□ 0.55
RCC1-201ENST00000373831 CYP19A1P11511 503 aaPredicted RBP18.49■□□□□ 0.55
RCC1-201ENST00000373831 ITPK1Q13572 414 aa18.49■□□□□ 0.55
RCC1-201ENST00000373831 TMEM57Q8N5G2 664 aa18.49■□□□□ 0.55
RCC1-201ENST00000373831 TEX13AQ9BXU3 409 aaPredicted RBP18.49■□□□□ 0.55
RCC1-201ENST00000373831 PDGFDQ9GZP0 370 aaPredicted RBP18.49■□□□□ 0.55
RCC1-201ENST00000373831 HYPKQ9NX55 129 aa18.49■□□□□ 0.55
RCC1-201ENST00000373831 RGPD3A6NKT7 1758 aaPredicted RBP18.49■□□□□ 0.55
RCC1-201ENST00000373831 RGPD4Q7Z3J3 1758 aa18.49■□□□□ 0.55
RCC1-201ENST00000373831 ARFGEF2Q9Y6D5 1785 aa18.49■□□□□ 0.55
RCC1-201ENST00000373831 MYL6BP14649 208 aa18.48■□□□□ 0.55
RCC1-201ENST00000373831 TXNRD1Q16881 649 aa18.48■□□□□ 0.55
RCC1-201ENST00000373831 FTSJ3Q8IY81 847 aaKnown RBP18.48■□□□□ 0.55
RCC1-201ENST00000373831 F6X3S4 739 aa18.47■□□□□ 0.55
RCC1-201ENST00000373831 MS4A1P11836 297 aa18.47■□□□□ 0.55
RCC1-201ENST00000373831 ATP6V1AP38606 617 aa18.47■□□□□ 0.55
RCC1-201ENST00000373831 FKBP5Q13451 457 aaPredicted RBP18.47■□□□□ 0.55
RCC1-201ENST00000373831 ERICH6BQ5W0A0 696 aa18.47■□□□□ 0.55
RCC1-201ENST00000373831 ADCY9O60503 1353 aa18.47■□□□□ 0.55
RCC1-201ENST00000373831 MVPQ14764 893 aaKnown RBP18.47■□□□□ 0.55
RCC1-201ENST00000373831 STARD3NLO95772 234 aa18.46■□□□□ 0.55
RCC1-201ENST00000373831 KCNQ4P56696 695 aa18.46■□□□□ 0.55
RCC1-201ENST00000373831 ZBTB7AO95365 584 aa18.45■□□□□ 0.54
RCC1-201ENST00000373831 XAGE3Q8WTP9 111 aa18.45■□□□□ 0.54
RCC1-201ENST00000373831 STK32BQ9NY57 414 aa18.45■□□□□ 0.54
RCC1-201ENST00000373831 INTS3Q68E01 1043 aaKnown RBP18.44■□□□□ 0.54
RCC1-201ENST00000373831 COPS6Q7L5N1 327 aa18.44■□□□□ 0.54
RCC1-201ENST00000373831 PXDNLA1KZ92 1463 aa18.44■□□□□ 0.54
RCC1-201ENST00000373831 PI4KAP2A4QPH2 592 aa18.43■□□□□ 0.54
RCC1-201ENST00000373831 AIMP1Q12904 312 aaKnown RBP18.43■□□□□ 0.54
RCC1-201ENST00000373831 SLC15A2Q16348 729 aa18.43■□□□□ 0.54
RCC1-201ENST00000373831 INTS5Q6P9B9 1019 aaKnown RBP18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms