RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 UBAP1LF5GYI3 381 aa19.65■□□□□ 0.74
HDAC8-209ENST00000373589 ADAMTS2O95450 1211 aa19.65■□□□□ 0.74
HDAC8-209ENST00000373589 ANKRD45Q5TZF3 282 aa19.65■□□□□ 0.74
HDAC8-209ENST00000373589 LNPKQ9C0E8 428 aa19.65■□□□□ 0.74
HDAC8-209ENST00000373589 KSR2Q6VAB6 950 aa19.64■□□□□ 0.73
HDAC8-209ENST00000373589 USP16Q9Y5T5 823 aa19.64■□□□□ 0.73
HDAC8-209ENST00000373589 PAPPAQ13219 1627 aa19.64■□□□□ 0.73
HDAC8-209ENST00000373589 NRAPQ86VF7 1730 aa19.63■□□□□ 0.73
HDAC8-209ENST00000373589 UBR2Q8IWV8 1755 aa19.63■□□□□ 0.73
HDAC8-209ENST00000373589 LRP10Q7Z4F1 713 aa19.62■□□□□ 0.73
HDAC8-209ENST00000373589 TOGARAM1Q9Y4F4 1720 aa19.62■□□□□ 0.73
HDAC8-209ENST00000373589 TNS2Q63HR2 1409 aa19.62■□□□□ 0.73
HDAC8-209ENST00000373589 HMMRO75330 724 aa19.62■□□□□ 0.73
HDAC8-209ENST00000373589 MAP3K2Q9Y2U5 619 aa19.62■□□□□ 0.73
HDAC8-209ENST00000373589 KCPQ6ZWJ8 1503 aa19.61■□□□□ 0.73
HDAC8-209ENST00000373589 DDX58O95786 925 aaKnown RBP19.6■□□□□ 0.73
HDAC8-209ENST00000373589 UBTFL1P0CB47 393 aaPredicted RBP19.6■□□□□ 0.73
HDAC8-209ENST00000373589 SPATA31A1Q5TZJ5 1347 aa19.6■□□□□ 0.73
HDAC8-209ENST00000373589 WNK3Q9BYP7 1800 aa19.6■□□□□ 0.73
HDAC8-209ENST00000373589 LAMB4A4D0S4 1761 aa19.6■□□□□ 0.73
HDAC8-209ENST00000373589 SLIT2O94813 1529 aa19.6■□□□□ 0.73
HDAC8-209ENST00000373589 NUTM2BA6NNL0 878 aaPredicted RBP19.59■□□□□ 0.73
HDAC8-209ENST00000373589 NUTM2EB1AL46 878 aaPredicted RBP19.59■□□□□ 0.73
HDAC8-209ENST00000373589 ALDH1L1O75891 902 aa19.59■□□□□ 0.73
HDAC8-209ENST00000373589 ATP8B2P98198 1209 aa19.59■□□□□ 0.73
HDAC8-209ENST00000373589 NUTM2AQ8IVF1 878 aaPredicted RBP19.59■□□□□ 0.73
HDAC8-209ENST00000373589 THRAP3Q9Y2W1 955 aaKnown RBP19.59■□□□□ 0.73
HDAC8-209ENST00000373589 LRRFIP2Q9Y608 721 aaKnown RBP19.59■□□□□ 0.73
HDAC8-209ENST00000373589 ANP32AP39687 249 aaKnown RBP19.59■□□□□ 0.73
HDAC8-209ENST00000373589 CDCA7Q9BWT1 371 aaPredicted RBP19.59■□□□□ 0.73
HDAC8-209ENST00000373589 ERBB4Q15303 1308 aa19.58■□□□□ 0.73
HDAC8-209ENST00000373589 EXOC5O00471 708 aa19.58■□□□□ 0.72
HDAC8-209ENST00000373589 MYL6BP14649 208 aa19.58■□□□□ 0.72
HDAC8-209ENST00000373589 TMOD3Q9NYL9 352 aa19.58■□□□□ 0.72
HDAC8-209ENST00000373589 NWD2Q9ULI1 1742 aa19.57■□□□□ 0.72
HDAC8-209ENST00000373589 IBTKQ9P2D0 1353 aaPredicted RBP19.57■□□□□ 0.72
HDAC8-209ENST00000373589 LRP6O75581 1613 aa19.57■□□□□ 0.72
HDAC8-209ENST00000373589 AIMP1Q12904 312 aaKnown RBP19.57■□□□□ 0.72
HDAC8-209ENST00000373589 XAGE3Q8WTP9 111 aa19.57■□□□□ 0.72
HDAC8-209ENST00000373589 PNMA6EA0A0J9YXQ4 647 aa19.56■□□□□ 0.72
HDAC8-209ENST00000373589 NBPF7P0C2Y1 421 aaPredicted RBP19.56■□□□□ 0.72
HDAC8-209ENST00000373589 COPS6Q7L5N1 327 aa19.56■□□□□ 0.72
HDAC8-209ENST00000373589 LINS1Q8NG48 757 aa19.56■□□□□ 0.72
HDAC8-209ENST00000373589 SPATA31A5Q5VU36 1347 aa19.56■□□□□ 0.72
HDAC8-209ENST00000373589 SPATA31A7Q8IWB4 1347 aa19.56■□□□□ 0.72
HDAC8-209ENST00000373589 PIGBQ92521 554 aa19.56■□□□□ 0.72
HDAC8-209ENST00000373589 JCADQ9P266 1359 aa19.55■□□□□ 0.72
HDAC8-209ENST00000373589 PTCD1O75127 700 aaKnown RBP19.54■□□□□ 0.72
HDAC8-209ENST00000373589 BMP2KLQ5H9B9 411 aa19.54■□□□□ 0.72
HDAC8-209ENST00000373589 RIC3Q7Z5B4 369 aa19.54■□□□□ 0.72
HDAC8-209ENST00000373589 NPM2Q86SE8 214 aaKnown RBP19.54■□□□□ 0.72
HDAC8-209ENST00000373589 SSH3Q8TE77 659 aa19.54■□□□□ 0.72
HDAC8-209ENST00000373589 UTYO14607 1347 aa19.53■□□□□ 0.72
HDAC8-209ENST00000373589 BCL9O00512 1426 aa19.53■□□□□ 0.72
HDAC8-209ENST00000373589 NBPF26B4DH59 902 aa19.53■□□□□ 0.72
HDAC8-209ENST00000373589 MSH5O43196 834 aa19.53■□□□□ 0.72
HDAC8-209ENST00000373589 SEC24BO95487 1268 aa19.53■□□□□ 0.72
HDAC8-209ENST00000373589 PIP4K2AP48426 406 aaPredicted RBP19.53■□□□□ 0.72
HDAC8-209ENST00000373589 CWF19L2Q2TBE0 894 aaKnown RBP19.53■□□□□ 0.72
HDAC8-209ENST00000373589 NBPF14Q5TI25 921 aa19.53■□□□□ 0.72
HDAC8-209ENST00000373589 NBPF10Q6P3W6 841 aaKnown RBP19.53■□□□□ 0.72
HDAC8-209ENST00000373589 ANKRD13DQ6ZTN6 518 aa19.53■□□□□ 0.72
HDAC8-209ENST00000373589 NBPF15Q8N660 670 aa19.53■□□□□ 0.72
HDAC8-209ENST00000373589 IGKV5-2P06315 115 aa19.52■□□□□ 0.72
HDAC8-209ENST00000373589 POLA2Q14181 598 aa19.52■□□□□ 0.72
HDAC8-209ENST00000373589 BARGINQ6ZT62 677 aa19.52■□□□□ 0.72
HDAC8-209ENST00000373589 PLEKHM2Q8IWE5 1019 aa19.52■□□□□ 0.72
HDAC8-209ENST00000373589 IPO9Q96P70 1041 aaKnown RBP19.52■□□□□ 0.72
HDAC8-209ENST00000373589 METTL22Q9BUU2 404 aaPredicted RBP19.52■□□□□ 0.72
HDAC8-209ENST00000373589 ATG3Q9NT62 314 aa19.52■□□□□ 0.72
HDAC8-209ENST00000373589 ITGB4P16144 1822 aa19.51■□□□□ 0.71
HDAC8-209ENST00000373589 VSIG10Q8N0Z9 540 aa19.51■□□□□ 0.71
HDAC8-209ENST00000373589 ZBTB47Q9UFB7 747 aaPredicted RBP19.51■□□□□ 0.71
HDAC8-209ENST00000373589 ASAP1Q9ULH1 1129 aa19.51■□□□□ 0.71
HDAC8-209ENST00000373589 PPP1R42Q7Z4L9 355 aa19.51■□□□□ 0.71
HDAC8-209ENST00000373589 CERKQ8TCT0 537 aa19.51■□□□□ 0.71
HDAC8-209ENST00000373589 C9orf78Q9NZ63 289 aaPredicted RBP19.51■□□□□ 0.71
HDAC8-209ENST00000373589 GRM8O00222 908 aa19.5■□□□□ 0.71
HDAC8-209ENST00000373589 SMARCA5O60264 1052 aaPredicted RBP19.5■□□□□ 0.71
HDAC8-209ENST00000373589 NEXNQ0ZGT2 675 aa19.5■□□□□ 0.71
HDAC8-209ENST00000373589 MTX1Q13505 466 aa19.5■□□□□ 0.71
HDAC8-209ENST00000373589 DDB1Q16531 1140 aa19.5■□□□□ 0.71
HDAC8-209ENST00000373589 UNC5CLQ8IV45 518 aa19.5■□□□□ 0.71
HDAC8-209ENST00000373589 C16orf71Q8IYS4 520 aaPredicted RBP19.5■□□□□ 0.71
HDAC8-209ENST00000373589 HDAC5Q9UQL6 1122 aa19.5■□□□□ 0.71
HDAC8-209ENST00000373589 EXOC6BQ9Y2D4 811 aa19.5■□□□□ 0.71
HDAC8-209ENST00000373589 NEURL1BA8MQ27 555 aa19.49■□□□□ 0.71
HDAC8-209ENST00000373589 A1BGP04217 495 aa19.48■□□□□ 0.71
HDAC8-209ENST00000373589 PLBD2Q8NHP8 589 aa19.48■□□□□ 0.71
HDAC8-209ENST00000373589 BCL9LQ86UU0 1499 aa19.48■□□□□ 0.71
HDAC8-209ENST00000373589 APBB1O00213 710 aa19.48■□□□□ 0.71
HDAC8-209ENST00000373589 MYD88Q99836 296 aa19.48■□□□□ 0.71
HDAC8-209ENST00000373589 TEX13AQ9BXU3 409 aaPredicted RBP19.48■□□□□ 0.71
HDAC8-209ENST00000373589 SRGAP3O43295 1099 aa19.47■□□□□ 0.71
HDAC8-209ENST00000373589 GCKRQ14397 625 aa19.47■□□□□ 0.71
HDAC8-209ENST00000373589 OTUD7AQ8TE49 926 aaPredicted RBP19.47■□□□□ 0.71
HDAC8-209ENST00000373589 SPATA31A6Q5VVP1 1343 aa19.47■□□□□ 0.71
HDAC8-209ENST00000373589 FNBP4Q8N3X1 1017 aaPredicted RBP19.46■□□□□ 0.71
HDAC8-209ENST00000373589 LRRCC1Q9C099 1032 aa19.46■□□□□ 0.71
HDAC8-209ENST00000373589 ARFGEF2Q9Y6D5 1785 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms