RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 CHL1O00533 1208 aa26.41■■□□□ 1.82
SYNC-201ENST00000373484 AK7Q96M32 723 aa26.41■■□□□ 1.82
SYNC-201ENST00000373484 TFCP2L1Q9NZI6 479 aa26.41■■□□□ 1.82
SYNC-201ENST00000373484 RC3H1Q5TC82 1133 aaKnown RBP26.4■■□□□ 1.82
SYNC-201ENST00000373484 CFAP44Q96MT7 982 aa26.4■■□□□ 1.82
SYNC-201ENST00000373484 EIF4A1P60842 406 aaKnown RBP26.39■■□□□ 1.82
SYNC-201ENST00000373484 TEX13AQ9BXU3 409 aaPredicted RBP26.39■■□□□ 1.81
SYNC-201ENST00000373484 SALL2Q9Y467 1007 aaPredicted RBP26.39■■□□□ 1.81
SYNC-201ENST00000373484 LAS1LQ9Y4W2 734 aaKnown RBP26.39■■□□□ 1.81
SYNC-201ENST00000373484 ZNF853P0CG23 659 aa26.38■■□□□ 1.81
SYNC-201ENST00000373484 CYP19A1P11511 503 aaPredicted RBP26.38■■□□□ 1.81
SYNC-201ENST00000373484 CRKLP46109 303 aaKnown RBP26.38■■□□□ 1.81
SYNC-201ENST00000373484 IFT57Q9NWB7 429 aa26.38■■□□□ 1.81
SYNC-201ENST00000373484 NOP58Q9Y2X3 529 aaKnown RBP26.38■■□□□ 1.81
SYNC-201ENST00000373484 PNPLA7Q6ZV29 1317 aa26.38■■□□□ 1.81
SYNC-201ENST00000373484 SNRPA1P09661 255 aaKnown RBP26.37■■□□□ 1.81
SYNC-201ENST00000373484 GNPATO15228 680 aa26.36■■□□□ 1.81
SYNC-201ENST00000373484 GNAI1P63096 354 aa26.36■■□□□ 1.81
SYNC-201ENST00000373484 AMIGO3Q86WK7 504 aa26.36■■□□□ 1.81
SYNC-201ENST00000373484 CCDC136Q96JN2 1154 aa26.36■■□□□ 1.81
SYNC-201ENST00000373484 PDGFDQ9GZP0 370 aaPredicted RBP26.35■■□□□ 1.81
SYNC-201ENST00000373484 C4AP0C0L4 1744 aa26.35■■□□□ 1.81
SYNC-201ENST00000373484 PRAMEF22A3QJZ6 481 aa26.35■■□□□ 1.81
SYNC-201ENST00000373484 STARD3NLO95772 234 aa26.35■■□□□ 1.81
SYNC-201ENST00000373484 INTS5Q6P9B9 1019 aaKnown RBP26.35■■□□□ 1.81
SYNC-201ENST00000373484 IL16Q14005 1332 aa26.34■■□□□ 1.81
SYNC-201ENST00000373484 SSFA2P28290 1259 aa26.34■■□□□ 1.81
SYNC-201ENST00000373484 MBIPQ9NS73 344 aa26.34■■□□□ 1.81
SYNC-201ENST00000373484 CCDC87Q9NVE4 849 aa26.34■■□□□ 1.81
SYNC-201ENST00000373484 GIGYF1O75420 1035 aaPredicted RBP26.33■■□□□ 1.81
SYNC-201ENST00000373484 WDR63Q8IWG1 891 aa26.33■■□□□ 1.81
SYNC-201ENST00000373484 USP16Q9Y5T5 823 aa26.33■■□□□ 1.81
SYNC-201ENST00000373484 RPS6KA4O75676 772 aa26.32■■□□□ 1.8
SYNC-201ENST00000373484 FLAD1Q8NFF5 587 aa26.32■■□□□ 1.8
SYNC-201ENST00000373484 RTCBQ9Y3I0 505 aaKnown RBP26.32■■□□□ 1.8
SYNC-201ENST00000373484 SMIM5Q71RC9 77 aa26.31■■□□□ 1.8
SYNC-201ENST00000373484 COL23A1Q86Y22 540 aaPredicted RBP26.31■■□□□ 1.8
SYNC-201ENST00000373484 ZBTB1Q9Y2K1 713 aa26.31■■□□□ 1.8
SYNC-201ENST00000373484 ZNF521Q96K83 1311 aa26.31■■□□□ 1.8
SYNC-201ENST00000373484 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.3■■□□□ 1.8
SYNC-201ENST00000373484 COL24A1Q17RW2 1714 aa26.3■■□□□ 1.8
SYNC-201ENST00000373484 PHF14O94880 888 aa26.3■■□□□ 1.8
SYNC-201ENST00000373484 ADRA2BP18089 450 aa26.28■■□□□ 1.8
SYNC-201ENST00000373484 ANP32AP39687 249 aaKnown RBP26.28■■□□□ 1.8
SYNC-201ENST00000373484 SOS1Q07889 1333 aaPredicted RBP26.28■■□□□ 1.8
SYNC-201ENST00000373484 A1BGP04217 495 aa26.27■■□□□ 1.8
SYNC-201ENST00000373484 KRT24Q2M2I5 525 aa26.27■■□□□ 1.8
SYNC-201ENST00000373484 SLC16A10Q8TF71 515 aa26.27■■□□□ 1.8
SYNC-201ENST00000373484 TRAPPC3LQ5T215 181 aa26.26■■□□□ 1.79
SYNC-201ENST00000373484 CANXP27824 592 aaKnown RBP26.25■■□□□ 1.79
SYNC-201ENST00000373484 IPO9Q96P70 1041 aaKnown RBP26.25■■□□□ 1.79
SYNC-201ENST00000373484 LRP5O75197 1615 aa26.25■■□□□ 1.79
SYNC-201ENST00000373484 ARHGEF1Q92888 912 aaKnown RBP26.25■■□□□ 1.79
SYNC-201ENST00000373484 TSR2Q969E8 191 aaKnown RBP26.25■■□□□ 1.79
SYNC-201ENST00000373484 COL15A1P39059 1388 aa26.24■■□□□ 1.79
SYNC-201ENST00000373484 ZBTB7AO95365 584 aa26.23■■□□□ 1.79
SYNC-201ENST00000373484 EIF5P55010 431 aaKnown RBP26.23■■□□□ 1.79
SYNC-201ENST00000373484 MTFR1LQ9H019 292 aa26.23■■□□□ 1.79
SYNC-201ENST00000373484 HOXB7P09629 217 aa26.23■■□□□ 1.79
SYNC-201ENST00000373484 IL6STP40189 918 aaPredicted RBP26.23■■□□□ 1.79
SYNC-201ENST00000373484 SPINK5Q9NQ38 1064 aaPredicted RBP26.23■■□□□ 1.79
SYNC-201ENST00000373484 NBPF26B4DH59 902 aa26.21■■□□□ 1.79
SYNC-201ENST00000373484 PIP4K2AP48426 406 aaPredicted RBP26.21■■□□□ 1.79
SYNC-201ENST00000373484 DUSP27Q5VZP5 1158 aa26.21■■□□□ 1.79
SYNC-201ENST00000373484 NBPF10Q6P3W6 841 aaKnown RBP26.21■■□□□ 1.79
SYNC-201ENST00000373484 NBPF15Q8N660 670 aa26.21■■□□□ 1.79
SYNC-201ENST00000373484 RFC4P35249 363 aa26.2■■□□□ 1.78
SYNC-201ENST00000373484 TCERG1O14776 1098 aaKnown RBP26.19■■□□□ 1.78
SYNC-201ENST00000373484 SPON1Q9HCB6 807 aa26.19■■□□□ 1.78
SYNC-201ENST00000373484 ERBB4Q15303 1308 aa26.19■■□□□ 1.78
SYNC-201ENST00000373484 SCN7AQ01118 1682 aa26.19■■□□□ 1.78
SYNC-201ENST00000373484 BCORQ6W2J9 1755 aa26.19■■□□□ 1.78
SYNC-201ENST00000373484 EIF2S2P20042 333 aaKnown RBP26.18■■□□□ 1.78
SYNC-201ENST00000373484 RRP1P56182 461 aaKnown RBP26.18■■□□□ 1.78
SYNC-201ENST00000373484 C8orf58Q8NAV2 365 aa26.18■■□□□ 1.78
SYNC-201ENST00000373484 ATF5Q9Y2D1 282 aaPredicted RBP26.18■■□□□ 1.78
SYNC-201ENST00000373484 GOLGA2Q08379 1002 aa26.18■■□□□ 1.78
SYNC-201ENST00000373484 MYH16Q9H6N6 1097 aa26.18■■□□□ 1.78
SYNC-201ENST00000373484 USP42Q9H9J4 1324 aaKnown RBP26.17■■□□□ 1.78
SYNC-201ENST00000373484 ZNF330Q9Y3S2 320 aaPredicted RBP26.16■■□□□ 1.78
SYNC-201ENST00000373484 SRCAPQ6ZRS2 3230 aa26.16■■□□□ 1.78
SYNC-201ENST00000373484 A0A087WZG4 1122 aa26.16■■□□□ 1.78
SYNC-201ENST00000373484 MS4A1P11836 297 aa26.16■■□□□ 1.78
SYNC-201ENST00000373484 ELL2O00472 640 aaPredicted RBP26.15■■□□□ 1.78
SYNC-201ENST00000373484 DEKP35659 375 aaKnown RBP26.15■■□□□ 1.78
SYNC-201ENST00000373484 PTGER2P43116 358 aa26.15■■□□□ 1.78
SYNC-201ENST00000373484 HDGFL1Q5TGJ6 251 aa26.15■■□□□ 1.78
SYNC-201ENST00000373484 TSPYL6Q8N831 410 aa26.15■■□□□ 1.78
SYNC-201ENST00000373484 SGIP1Q9BQI5 828 aa26.15■■□□□ 1.78
SYNC-201ENST00000373484 SRP68Q9UHB9 627 aaKnown RBP26.15■■□□□ 1.78
SYNC-201ENST00000373484 NARFQ9UHQ1 456 aa26.15■■□□□ 1.78
SYNC-201ENST00000373484 GYS1P13807 737 aa26.14■■□□□ 1.78
SYNC-201ENST00000373484 MSL1Q68DK7 614 aa26.14■■□□□ 1.78
SYNC-201ENST00000373484 NPM2Q86SE8 214 aaKnown RBP26.14■■□□□ 1.78
SYNC-201ENST00000373484 NECTIN2Q92692 538 aa26.14■■□□□ 1.78
SYNC-201ENST00000373484 E9PSI1 815 aa26.14■■□□□ 1.77
SYNC-201ENST00000373484 PDIA6Q15084 440 aa26.14■■□□□ 1.77
SYNC-201ENST00000373484 ZPR1O75312 459 aa26.13■■□□□ 1.77
SYNC-201ENST00000373484 SLFN5Q08AF3 891 aa26.12■■□□□ 1.77
SYNC-201ENST00000373484 MYL6BP14649 208 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms