RNA–Protein interactions for RNA: ENST00000373327.4

TRAF3IP1-201, Transcript of TRAF3 interacting protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRAF3IP1, Length 4,279 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-201ENST00000373327 TSPY26PQ9H489 355 aa21.18■□□□□ 0.98
TRAF3IP1-201ENST00000373327 NDUFB9Q9Y6M9 179 aa21.18■□□□□ 0.98
TRAF3IP1-201ENST00000373327 WDR33Q9C0J8 1336 aaKnown RBP21.18■□□□□ 0.98
TRAF3IP1-201ENST00000373327 CLASP1Q7Z460 1538 aa21.18■□□□□ 0.98
TRAF3IP1-201ENST00000373327 RRAGDQ9NQL2 400 aaPredicted RBP21.17■□□□□ 0.98
TRAF3IP1-201ENST00000373327 RAB11FIP3O75154 756 aa21.17■□□□□ 0.98
TRAF3IP1-201ENST00000373327 BLOC1S2Q6QNY1 142 aa21.17■□□□□ 0.98
TRAF3IP1-201ENST00000373327 NFATC2IPQ8NCF5 419 aa21.17■□□□□ 0.98
TRAF3IP1-201ENST00000373327 GCP02774 474 aa21.17■□□□□ 0.98
TRAF3IP1-201ENST00000373327 CHAF1AQ13111 956 aaPredicted RBP21.17■□□□□ 0.98
TRAF3IP1-201ENST00000373327 LRRC2Q9BYS8 371 aa21.16■□□□□ 0.98
TRAF3IP1-201ENST00000373327 COPS6Q7L5N1 327 aa21.16■□□□□ 0.98
TRAF3IP1-201ENST00000373327 ADGRB3O60242 1522 aa21.16■□□□□ 0.98
TRAF3IP1-201ENST00000373327 RTL1A6NKG5 1358 aa21.16■□□□□ 0.98
TRAF3IP1-201ENST00000373327 CHMLP26374 656 aa21.16■□□□□ 0.98
TRAF3IP1-201ENST00000373327 TFIP11Q9UBB9 837 aaKnown RBP21.16■□□□□ 0.98
TRAF3IP1-201ENST00000373327 ERC1Q8IUD2 1116 aa21.15■□□□□ 0.98
TRAF3IP1-201ENST00000373327 A0A087WZG4 1122 aa21.15■□□□□ 0.98
TRAF3IP1-201ENST00000373327 ZNF853P0CG23 659 aa21.15■□□□□ 0.98
TRAF3IP1-201ENST00000373327 CCDC173Q0VFZ6 552 aa21.15■□□□□ 0.98
TRAF3IP1-201ENST00000373327 XAGE3Q8WTP9 111 aa21.15■□□□□ 0.98
TRAF3IP1-201ENST00000373327 PALD1Q9ULE6 856 aa21.15■□□□□ 0.98
TRAF3IP1-201ENST00000373327 SNRKQ9NRH2 765 aa21.15■□□□□ 0.98
TRAF3IP1-201ENST00000373327 ECHDC1Q9NTX5 307 aa21.15■□□□□ 0.98
TRAF3IP1-201ENST00000373327 PLEKHG3A1L390 1219 aa21.14■□□□□ 0.98
TRAF3IP1-201ENST00000373327 ZSCAN23Q3MJ62 389 aa21.14■□□□□ 0.98
TRAF3IP1-201ENST00000373327 UNC5CLQ8IV45 518 aa21.14■□□□□ 0.98
TRAF3IP1-201ENST00000373327 GTF2E1P29083 439 aaPredicted RBP21.14■□□□□ 0.97
TRAF3IP1-201ENST00000373327 MAP3K5Q99683 1374 aa21.13■□□□□ 0.97
TRAF3IP1-201ENST00000373327 CPLX1O14810 134 aa21.13■□□□□ 0.97
TRAF3IP1-201ENST00000373327 IQGAP1P46940 1657 aa21.13■□□□□ 0.97
TRAF3IP1-201ENST00000373327 KIDINS220Q9ULH0 1771 aa21.13■□□□□ 0.97
TRAF3IP1-201ENST00000373327 GUCY1B3Q02153 619 aa21.13■□□□□ 0.97
TRAF3IP1-201ENST00000373327 TBX22Q9Y458 520 aa21.13■□□□□ 0.97
TRAF3IP1-201ENST00000373327 PRIM1P49642 420 aaKnown RBP21.13■□□□□ 0.97
TRAF3IP1-201ENST00000373327 ZNF592Q92610 1267 aa21.13■□□□□ 0.97
TRAF3IP1-201ENST00000373327 ABCA9Q8IUA7 1624 aa21.13■□□□□ 0.97
TRAF3IP1-201ENST00000373327 TULP1O00294 542 aaPredicted RBP21.12■□□□□ 0.97
TRAF3IP1-201ENST00000373327 USP44Q9H0E7 712 aa21.12■□□□□ 0.97
TRAF3IP1-201ENST00000373327 PRAMEF22A3QJZ6 481 aa21.12■□□□□ 0.97
TRAF3IP1-201ENST00000373327 RAB11FIP4Q86YS3 637 aa21.12■□□□□ 0.97
TRAF3IP1-201ENST00000373327 BECN2A8MW95 431 aa21.12■□□□□ 0.97
TRAF3IP1-201ENST00000373327 PSMA5P28066 241 aa21.12■□□□□ 0.97
TRAF3IP1-201ENST00000373327 KLHL40Q2TBA0 621 aa21.12■□□□□ 0.97
TRAF3IP1-201ENST00000373327 DDX46Q7L014 1031 aaKnown RBP21.12■□□□□ 0.97
TRAF3IP1-201ENST00000373327 HTATSF1O43719 755 aaKnown RBP21.11■□□□□ 0.97
TRAF3IP1-201ENST00000373327 CREBRFQ8IUR6 639 aa21.11■□□□□ 0.97
TRAF3IP1-201ENST00000373327 FAM135BQ49AJ0 1406 aa21.11■□□□□ 0.97
TRAF3IP1-201ENST00000373327 AMOTQ4VCS5 1084 aa21.11■□□□□ 0.97
TRAF3IP1-201ENST00000373327 CHMP4CQ96CF2 233 aa21.11■□□□□ 0.97
TRAF3IP1-201ENST00000373327 FMNL2Q96PY5 1086 aa21.11■□□□□ 0.97
TRAF3IP1-201ENST00000373327 INO80Q9ULG1 1556 aaPredicted RBP21.11■□□□□ 0.97
TRAF3IP1-201ENST00000373327 GAS2L3Q86XJ1 694 aa21.11■□□□□ 0.97
TRAF3IP1-201ENST00000373327 ARAP3Q8WWN8 1544 aa21.11■□□□□ 0.97
TRAF3IP1-201ENST00000373327 LARP1Q6PKG0 1096 aaKnown RBP21.1■□□□□ 0.97
TRAF3IP1-201ENST00000373327 CNPY2Q9Y2B0 182 aa21.1■□□□□ 0.97
TRAF3IP1-201ENST00000373327 LAMC1P11047 1609 aa21.1■□□□□ 0.97
TRAF3IP1-201ENST00000373327 SBNO1A3KN83 1393 aa21.1■□□□□ 0.97
TRAF3IP1-201ENST00000373327 GOLGA6L19H0YKK7 550 aa21.09■□□□□ 0.97
TRAF3IP1-201ENST00000373327 ATP2B1P20020 1258 aa21.09■□□□□ 0.97
TRAF3IP1-201ENST00000373327 USP25Q9UHP3 1055 aa21.09■□□□□ 0.97
TRAF3IP1-201ENST00000373327 LIMCH1Q9UPQ0 1083 aa21.09■□□□□ 0.97
TRAF3IP1-201ENST00000373327 SOS1Q07889 1333 aaPredicted RBP21.09■□□□□ 0.97
TRAF3IP1-201ENST00000373327 GJB2P29033 226 aa21.09■□□□□ 0.97
TRAF3IP1-201ENST00000373327 EDC3Q96F86 508 aaKnown RBP21.08■□□□□ 0.97
TRAF3IP1-201ENST00000373327 GPTP24298 496 aa21.08■□□□□ 0.97
TRAF3IP1-201ENST00000373327 CKAP2LQ8IYA6 745 aa21.08■□□□□ 0.97
TRAF3IP1-201ENST00000373327 ZNF830Q96NB3 372 aaPredicted RBP21.08■□□□□ 0.96
TRAF3IP1-201ENST00000373327 VSIG10Q8N0Z9 540 aa21.07■□□□□ 0.96
TRAF3IP1-201ENST00000373327 IP6K1Q92551 441 aa21.07■□□□□ 0.96
TRAF3IP1-201ENST00000373327 ISY1Q9ULR0 285 aaKnown RBP21.07■□□□□ 0.96
TRAF3IP1-201ENST00000373327 HSPA2P54652 639 aa21.07■□□□□ 0.96
TRAF3IP1-201ENST00000373327 GRM8O00222 908 aa21.07■□□□□ 0.96
TRAF3IP1-201ENST00000373327 CCT2P78371 535 aaKnown RBP21.07■□□□□ 0.96
TRAF3IP1-201ENST00000373327 PROSER3Q2NL68 480 aa21.07■□□□□ 0.96
TRAF3IP1-201ENST00000373327 FAM173BQ6P4H8 233 aa21.07■□□□□ 0.96
TRAF3IP1-201ENST00000373327 AK2P54819 239 aa21.07■□□□□ 0.96
TRAF3IP1-201ENST00000373327 HYPKQ9NX55 129 aa21.07■□□□□ 0.96
TRAF3IP1-201ENST00000373327 AKAP4Q5JQC9 854 aa21.06■□□□□ 0.96
TRAF3IP1-201ENST00000373327 BICC1Q9H694 974 aaKnown RBP21.06■□□□□ 0.96
TRAF3IP1-201ENST00000373327 SASS6Q6UVJ0 657 aa21.06■□□□□ 0.96
TRAF3IP1-201ENST00000373327 MROH2AA6NES4 1674 aa21.06■□□□□ 0.96
TRAF3IP1-201ENST00000373327 LRRC7Q96NW7 1537 aa21.06■□□□□ 0.96
TRAF3IP1-201ENST00000373327 GOLIM4O00461 696 aa21.06■□□□□ 0.96
TRAF3IP1-201ENST00000373327 ANKRD13DQ6ZTN6 518 aa21.06■□□□□ 0.96
TRAF3IP1-201ENST00000373327 RALYLQ86SE5 291 aaKnown RBP21.06■□□□□ 0.96
TRAF3IP1-201ENST00000373327 A2ML1A8K2U0 1454 aa21.06■□□□□ 0.96
TRAF3IP1-201ENST00000373327 STX6O43752 255 aa21.05■□□□□ 0.96
TRAF3IP1-201ENST00000373327 NCBP3Q53F19 620 aaKnown RBP21.05■□□□□ 0.96
TRAF3IP1-201ENST00000373327 KSR2Q6VAB6 950 aa21.05■□□□□ 0.96
TRAF3IP1-201ENST00000373327 NFXL1Q6ZNB6 911 aa21.05■□□□□ 0.96
TRAF3IP1-201ENST00000373327 ALKQ9UM73 1620 aa21.05■□□□□ 0.96
TRAF3IP1-201ENST00000373327 RRP12Q5JTH9 1297 aaKnown RBP21.05■□□□□ 0.96
TRAF3IP1-201ENST00000373327 GIMAP6Q6P9H5 292 aa21.05■□□□□ 0.96
TRAF3IP1-201ENST00000373327 USP48Q86UV5 1035 aa21.05■□□□□ 0.96
TRAF3IP1-201ENST00000373327 HCLS1P14317 486 aaPredicted RBP21.05■□□□□ 0.96
TRAF3IP1-201ENST00000373327 HAND2P61296 217 aa21.05■□□□□ 0.96
TRAF3IP1-201ENST00000373327 TRIM5Q9C035 493 aa21.04■□□□□ 0.96
TRAF3IP1-201ENST00000373327 RBM8AQ9Y5S9 174 aaKnown RBP21.04■□□□□ 0.96
TRAF3IP1-201ENST00000373327 RNMTO43148 476 aaKnown RBP21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms