RNA–Protein interactions for RNA: ENST00000372920.1

HNF4A-203, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best)

Gene HNF4A, Length 3,340 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-203ENST00000372920 MPNDQ8N594 471 aa21.8■■□□□ 1.08
HNF4A-203ENST00000372920 SSH3Q8TE77 659 aa21.8■■□□□ 1.08
HNF4A-203ENST00000372920 FAM69CQ0P6D2 419 aa21.8■■□□□ 1.08
HNF4A-203ENST00000372920 RAD50Q92878 1312 aa21.79■■□□□ 1.08
HNF4A-203ENST00000372920 FAM208AQ9UK61 1670 aaKnown RBP21.79■■□□□ 1.08
HNF4A-203ENST00000372920 USP25Q9UHP3 1055 aa21.79■■□□□ 1.08
HNF4A-203ENST00000372920 SNX14Q9Y5W7 946 aa21.79■■□□□ 1.08
HNF4A-203ENST00000372920 HTATSF1O43719 755 aaKnown RBP21.79■■□□□ 1.08
HNF4A-203ENST00000372920 SGSM2O43147 1006 aa21.78■■□□□ 1.08
HNF4A-203ENST00000372920 AMPHP49418 695 aa21.78■■□□□ 1.08
HNF4A-203ENST00000372920 PI4K2BQ8TCG2 481 aa21.78■■□□□ 1.08
HNF4A-203ENST00000372920 ZSCAN22P10073 491 aaPredicted RBP21.78■■□□□ 1.08
HNF4A-203ENST00000372920 TTC14Q96N46 770 aa21.78■■□□□ 1.08
HNF4A-203ENST00000372920 GNAT3A8MTJ3 354 aa21.78■■□□□ 1.08
HNF4A-203ENST00000372920 SURF6O75683 361 aaKnown RBP21.78■■□□□ 1.08
HNF4A-203ENST00000372920 TPRNQ4KMQ1 711 aa21.78■■□□□ 1.08
HNF4A-203ENST00000372920 ZNF830Q96NB3 372 aaPredicted RBP21.78■■□□□ 1.08
HNF4A-203ENST00000372920 LARP6Q9BRS8 491 aaKnown RBP21.77■■□□□ 1.08
HNF4A-203ENST00000372920 RAB11FIP3O75154 756 aa21.77■■□□□ 1.08
HNF4A-203ENST00000372920 AK2P54819 239 aa21.77■■□□□ 1.08
HNF4A-203ENST00000372920 PPP1R42Q7Z4L9 355 aa21.77■■□□□ 1.08
HNF4A-203ENST00000372920 ZBTB7CA1YPR0 619 aa21.77■■□□□ 1.07
HNF4A-203ENST00000372920 RASEFQ8IZ41 740 aa21.76■■□□□ 1.07
HNF4A-203ENST00000372920 LSG1Q9H089 658 aaKnown RBP21.76■■□□□ 1.07
HNF4A-203ENST00000372920 HCLS1P14317 486 aaPredicted RBP21.76■■□□□ 1.07
HNF4A-203ENST00000372920 RHPN1Q8TCX5 695 aa21.76■■□□□ 1.07
HNF4A-203ENST00000372920 FMN2Q9NZ56 1722 aa21.76■■□□□ 1.07
HNF4A-203ENST00000372920 ADAMTS13Q76LX8 1427 aa21.76■■□□□ 1.07
HNF4A-203ENST00000372920 TTC21AQ8NDW8 1320 aa21.76■■□□□ 1.07
HNF4A-203ENST00000372920 PXDNLA1KZ92 1463 aa21.75■■□□□ 1.07
HNF4A-203ENST00000372920 STX6O43752 255 aa21.75■■□□□ 1.07
HNF4A-203ENST00000372920 ADCY5O95622 1261 aa21.75■■□□□ 1.07
HNF4A-203ENST00000372920 SYT1P21579 422 aa21.75■■□□□ 1.07
HNF4A-203ENST00000372920 RUFY3Q7L099 469 aa21.75■■□□□ 1.07
HNF4A-203ENST00000372920 MTERF4Q7Z6M4 381 aaKnown RBP21.75■■□□□ 1.07
HNF4A-203ENST00000372920 TMEM2Q9UHN6 1383 aa21.75■■□□□ 1.07
HNF4A-203ENST00000372920 UBE2HP62256 183 aa21.75■■□□□ 1.07
HNF4A-203ENST00000372920 LRRC37A3O60309 1634 aa21.75■■□□□ 1.07
HNF4A-203ENST00000372920 POLA2Q14181 598 aa21.75■■□□□ 1.07
HNF4A-203ENST00000372920 DNTTIP2Q5QJE6 756 aaKnown RBP21.75■■□□□ 1.07
HNF4A-203ENST00000372920 IL17REQ8NFR9 667 aa21.75■■□□□ 1.07
HNF4A-203ENST00000372920 PIBF1Q8WXW3 757 aa21.75■■□□□ 1.07
HNF4A-203ENST00000372920 LIMCH1Q9UPQ0 1083 aa21.75■■□□□ 1.07
HNF4A-203ENST00000372920 LETM1O95202 739 aaPredicted RBP21.74■■□□□ 1.07
HNF4A-203ENST00000372920 PHAXQ9H814 394 aaKnown RBP21.74■■□□□ 1.07
HNF4A-203ENST00000372920 ESF1Q9H501 851 aaKnown RBP21.74■■□□□ 1.07
HNF4A-203ENST00000372920 TTC12Q9H892 705 aaPredicted RBP21.73■■□□□ 1.07
HNF4A-203ENST00000372920 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.73■■□□□ 1.07
HNF4A-203ENST00000372920 F13A1P00488 732 aa21.73■■□□□ 1.07
HNF4A-203ENST00000372920 CNTROBQ8N137 903 aa21.73■■□□□ 1.07
HNF4A-203ENST00000372920 NOLC1Q14978 699 aaKnown RBP eCLIP21.72■■□□□ 1.072e-6■■■■■ 30.6
HNF4A-203ENST00000372920 MYRIPQ8NFW9 859 aa21.72■■□□□ 1.07
HNF4A-203ENST00000372920 SMC3Q9UQE7 1217 aa21.72■■□□□ 1.07
HNF4A-203ENST00000372920 SRGAP3O43295 1099 aa21.72■■□□□ 1.07
HNF4A-203ENST00000372920 FIBPO43427 364 aa21.72■■□□□ 1.07
HNF4A-203ENST00000372920 TAF7Q15545 349 aaPredicted RBP21.72■■□□□ 1.07
HNF4A-203ENST00000372920 HDGFL1Q5TGJ6 251 aa21.72■■□□□ 1.07
HNF4A-203ENST00000372920 TCHHQ07283 1943 aa21.72■■□□□ 1.07
HNF4A-203ENST00000372920 CWC27Q6UX04 472 aaKnown RBP21.72■■□□□ 1.07
HNF4A-203ENST00000372920 KIF1BPQ96EK5 621 aa21.72■■□□□ 1.07
HNF4A-203ENST00000372920 ARID3AQ99856 593 aa21.72■■□□□ 1.07
HNF4A-203ENST00000372920 SPG7Q9UQ90 795 aa21.71■■□□□ 1.07
HNF4A-203ENST00000372920 CPA1P15085 419 aa21.71■■□□□ 1.07
HNF4A-203ENST00000372920 MAP3K5Q99683 1374 aa21.7■■□□□ 1.07
HNF4A-203ENST00000372920 TNRQ92752 1358 aa21.7■■□□□ 1.06
HNF4A-203ENST00000372920 C17orf53Q8N3J3 647 aaPredicted RBP21.7■■□□□ 1.06
HNF4A-203ENST00000372920 N4BP2Q86UW6 1770 aaPredicted RBP21.7■■□□□ 1.06
HNF4A-203ENST00000372920 KDM4AO75164 1064 aa21.7■■□□□ 1.06
HNF4A-203ENST00000372920 LARGE1O95461 756 aa21.7■■□□□ 1.06
HNF4A-203ENST00000372920 CYB5RLQ6IPT4 315 aa21.7■■□□□ 1.06
HNF4A-203ENST00000372920 ATP6V1DQ9Y5K8 247 aa21.7■■□□□ 1.06
HNF4A-203ENST00000372920 NBPF7P0C2Y1 421 aaPredicted RBP21.69■■□□□ 1.06
HNF4A-203ENST00000372920 CASTP20810 708 aaKnown RBP21.69■■□□□ 1.06
HNF4A-203ENST00000372920 NGDNQ8NEJ9 315 aaKnown RBP21.69■■□□□ 1.06
HNF4A-203ENST00000372920 GIMAP6Q6P9H5 292 aa21.68■■□□□ 1.06
HNF4A-203ENST00000372920 FUCA2Q9BTY2 467 aa21.68■■□□□ 1.06
HNF4A-203ENST00000372920 BABAM1Q9NWV8 329 aa21.68■■□□□ 1.06
HNF4A-203ENST00000372920 JARID2Q92833 1246 aaPredicted RBP21.68■■□□□ 1.06
HNF4A-203ENST00000372920 PRIMPOLQ96LW4 560 aa21.68■■□□□ 1.06
HNF4A-203ENST00000372920 HYPKQ9NX55 129 aa21.68■■□□□ 1.06
HNF4A-203ENST00000372920 TSPOAP1O95153 1857 aa21.67■■□□□ 1.06
HNF4A-203ENST00000372920 DTNBO60941 627 aa21.67■■□□□ 1.06
HNF4A-203ENST00000372920 CCDC83Q8IWF9 413 aa21.67■■□□□ 1.06
HNF4A-203ENST00000372920 PTPRUQ92729 1446 aa21.67■■□□□ 1.06
HNF4A-203ENST00000372920 GJB2P29033 226 aa21.67■■□□□ 1.06
HNF4A-203ENST00000372920 LTKP29376 864 aa21.67■■□□□ 1.06
HNF4A-203ENST00000372920 DNM1Q05193 864 aaKnown RBP21.67■■□□□ 1.06
HNF4A-203ENST00000372920 HOXC9P31274 260 aa21.66■■□□□ 1.06
HNF4A-203ENST00000372920 SPTLC3Q9NUV7 552 aa21.66■■□□□ 1.06
HNF4A-203ENST00000372920 MTMR6Q9Y217 621 aa21.66■■□□□ 1.06
HNF4A-203ENST00000372920 SLC26A8Q96RN1 970 aa21.65■■□□□ 1.06
HNF4A-203ENST00000372920 DIP2BQ9P265 1576 aa21.65■■□□□ 1.06
HNF4A-203ENST00000372920 CACNA1FO60840 1977 aa21.65■■□□□ 1.06
HNF4A-203ENST00000372920 EIF2S2P20042 333 aaKnown RBP21.65■■□□□ 1.06
HNF4A-203ENST00000372920 HMGN5P82970 282 aaKnown RBP21.65■■□□□ 1.06
HNF4A-203ENST00000372920 PLCB2Q00722 1185 aa21.65■■□□□ 1.06
HNF4A-203ENST00000372920 TSC1Q92574 1164 aa21.65■■□□□ 1.06
HNF4A-203ENST00000372920 DIAPH3Q9NSV4 1193 aa21.65■■□□□ 1.06
HNF4A-203ENST00000372920 NLRP6P59044 892 aa21.64■■□□□ 1.06
HNF4A-203ENST00000372920 PTH1RQ03431 593 aa21.64■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms