RNA–Protein interactions for RNA: ENST00000372826.6

PABPC1L-208, Transcript of poly(A) binding protein cytoplasmic 1 like, human

TSL 5

Gene PABPC1L, Length 854 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1L-208	ENST00000372826		E9PSI1	815 aa		13.57	□□□□□ -0.24
PABPC1L-208	ENST00000372826	CHL1	O00533	1208 aa		13.57	□□□□□ -0.24
PABPC1L-208	ENST00000372826	KCNQ2	O43526	872 aa		13.57	□□□□□ -0.24
PABPC1L-208	ENST00000372826	PIGB	Q92521	554 aa		13.57	□□□□□ -0.24
PABPC1L-208	ENST00000372826	SYTL4	Q96C24	671 aa	Predicted RBP	13.57	□□□□□ -0.24
PABPC1L-208	ENST00000372826	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.57	□□□□□ -0.24
PABPC1L-208	ENST00000372826	UTRN	P46939	3433 aa		13.57	□□□□□ -0.24
PABPC1L-208	ENST00000372826	BTBD11	A6QL63	1104 aa		13.56	□□□□□ -0.24
PABPC1L-208	ENST00000372826	SLFN5	Q08AF3	891 aa		13.56	□□□□□ -0.24
PABPC1L-208	ENST00000372826	CDCA7L	Q96GN5	454 aa		13.56	□□□□□ -0.24
PABPC1L-208	ENST00000372826	BCL11B	Q9C0K0	894 aa	Predicted RBP	13.56	□□□□□ -0.24
PABPC1L-208	ENST00000372826	MYH16	Q9H6N6	1097 aa		13.56	□□□□□ -0.24
PABPC1L-208	ENST00000372826	PTF1A	Q7RTS3	328 aa		13.55	□□□□□ -0.24
PABPC1L-208	ENST00000372826	TRMT2A	Q8IZ69	625 aa	Known RBP	13.55	□□□□□ -0.24
PABPC1L-208	ENST00000372826	MBIP	Q9NS73	344 aa		13.55	□□□□□ -0.24
PABPC1L-208	ENST00000372826	TSPYL4	Q9UJ04	414 aa		13.55	□□□□□ -0.24
PABPC1L-208	ENST00000372826	LAS1L	Q9Y4W2	734 aa	Known RBP	13.55	□□□□□ -0.24
PABPC1L-208	ENST00000372826	FANCI	Q9NVI1	1328 aa		13.55	□□□□□ -0.24
PABPC1L-208	ENST00000372826	KCP	Q6ZWJ8	1503 aa		13.54	□□□□□ -0.24
PABPC1L-208	ENST00000372826	UBR2	Q8IWV8	1755 aa		13.54	□□□□□ -0.24
PABPC1L-208	ENST00000372826	ZNF790	Q6PG37	636 aa		13.54	□□□□□ -0.24
PABPC1L-208	ENST00000372826	RNF39	Q9H2S5	420 aa		13.54	□□□□□ -0.24
PABPC1L-208	ENST00000372826	ATG3	Q9NT62	314 aa		13.54	□□□□□ -0.24
PABPC1L-208	ENST00000372826	MIS18A	Q9NYP9	233 aa		13.54	□□□□□ -0.24
PABPC1L-208	ENST00000372826	BTAF1	O14981	1849 aa		13.54	□□□□□ -0.24
PABPC1L-208	ENST00000372826	PLSCR1	O15162	318 aa		13.53	□□□□□ -0.24
PABPC1L-208	ENST00000372826	TSR2	Q969E8	191 aa	Known RBP	13.53	□□□□□ -0.24
PABPC1L-208	ENST00000372826	ASAP1	Q9ULH1	1129 aa		13.53	□□□□□ -0.24
PABPC1L-208	ENST00000372826	KCNQ3	O43525	872 aa		13.52	□□□□□ -0.25
PABPC1L-208	ENST00000372826	SLC39A6	Q13433	755 aa		13.52	□□□□□ -0.25
PABPC1L-208	ENST00000372826	DCAF8	Q5TAQ9	597 aa		13.52	□□□□□ -0.25
PABPC1L-208	ENST00000372826	DUSP27	Q5VZP5	1158 aa		13.52	□□□□□ -0.25
PABPC1L-208	ENST00000372826	TTC5	Q8N0Z6	440 aa		13.52	□□□□□ -0.25
PABPC1L-208	ENST00000372826	SMARCC1	Q92922	1105 aa	Predicted RBP	13.52	□□□□□ -0.25
PABPC1L-208	ENST00000372826	PALLD	Q8WX93	1383 aa		13.52	□□□□□ -0.25
PABPC1L-208	ENST00000372826	HEG1	Q9ULI3	1381 aa		13.51	□□□□□ -0.25
PABPC1L-208	ENST00000372826	EIF4A1	P60842	406 aa	Known RBP	13.51	□□□□□ -0.25
PABPC1L-208	ENST00000372826	CIC	Q96RK0	1608 aa	Predicted RBP	13.5	□□□□□ -0.25
PABPC1L-208	ENST00000372826	BRPF1	P55201	1214 aa	Predicted RBP	13.5	□□□□□ -0.25
PABPC1L-208	ENST00000372826	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	13.5	□□□□□ -0.25
PABPC1L-208	ENST00000372826	ZNF496	Q96IT1	587 aa	Predicted RBP	13.5	□□□□□ -0.25
PABPC1L-208	ENST00000372826	FMNL2	Q96PY5	1086 aa		13.5	□□□□□ -0.25
PABPC1L-208	ENST00000372826	ZNF831	Q5JPB2	1677 aa		13.49	□□□□□ -0.25
PABPC1L-208	ENST00000372826	RREB1	Q92766	1687 aa		13.49	□□□□□ -0.25
PABPC1L-208	ENST00000372826	RGPD3	A6NKT7	1758 aa	Predicted RBP	13.48	□□□□□ -0.25
PABPC1L-208	ENST00000372826	RGPD4	Q7Z3J3	1758 aa		13.48	□□□□□ -0.25
PABPC1L-208	ENST00000372826	LY75	O60449	1722 aa		13.48	□□□□□ -0.25
PABPC1L-208	ENST00000372826	SOS1	Q07889	1333 aa	Predicted RBP	13.48	□□□□□ -0.25
PABPC1L-208	ENST00000372826	NUBP1	P53384	320 aa		13.48	□□□□□ -0.25
PABPC1L-208	ENST00000372826	EXOSC9	Q06265	439 aa	Known RBP	13.48	□□□□□ -0.25
PABPC1L-208	ENST00000372826	KRT24	Q2M2I5	525 aa		13.48	□□□□□ -0.25
PABPC1L-208	ENST00000372826	PTCD1	O75127	700 aa	Known RBP	13.47	□□□□□ -0.25
PABPC1L-208	ENST00000372826	HOXB7	P09629	217 aa		13.47	□□□□□ -0.25
PABPC1L-208	ENST00000372826	C8orf58	Q8NAV2	365 aa		13.47	□□□□□ -0.25
PABPC1L-208	ENST00000372826	TJP1	Q07157	1748 aa		13.47	□□□□□ -0.25
PABPC1L-208	ENST00000372826	NUP188	Q5SRE5	1749 aa		13.47	□□□□□ -0.25
PABPC1L-208	ENST00000372826	C5	P01031	1676 aa		13.47	□□□□□ -0.25
PABPC1L-208	ENST00000372826	LAMB4	A4D0S4	1761 aa		13.46	□□□□□ -0.25
PABPC1L-208	ENST00000372826	LOC102724428	A0A0B4J2F2	783 aa		13.46	□□□□□ -0.25
PABPC1L-208	ENST00000372826	GIGYF1	O75420	1035 aa	Predicted RBP	13.46	□□□□□ -0.25
PABPC1L-208	ENST00000372826	SNRPA1	P09661	255 aa	Known RBP	13.46	□□□□□ -0.25
PABPC1L-208	ENST00000372826	SIK1	P57059	783 aa		13.46	□□□□□ -0.25
PABPC1L-208	ENST00000372826	TWISTNB	Q3B726	338 aa	Predicted RBP	13.46	□□□□□ -0.25
PABPC1L-208	ENST00000372826	SLC4A9	Q96Q91	983 aa		13.46	□□□□□ -0.25
PABPC1L-208	ENST00000372826	RBM42	Q9BTD8	480 aa	Known RBP	13.46	□□□□□ -0.25
PABPC1L-208	ENST00000372826	CT47B1	P0C2W7	299 aa	Predicted RBP	13.45	□□□□□ -0.26
PABPC1L-208	ENST00000372826	TSPYL6	Q8N831	410 aa		13.45	□□□□□ -0.26
PABPC1L-208	ENST00000372826	PRAMEF22	A3QJZ6	481 aa		13.44	□□□□□ -0.26
PABPC1L-208	ENST00000372826	STK24	Q9Y6E0	443 aa		13.44	□□□□□ -0.26
PABPC1L-208	ENST00000372826	KAT6B	Q8WYB5	2073 aa		13.43	□□□□□ -0.26
PABPC1L-208	ENST00000372826	ELL2	O00472	640 aa	Predicted RBP	13.43	□□□□□ -0.26
PABPC1L-208	ENST00000372826	VAMP4	O75379	141 aa		13.43	□□□□□ -0.26
PABPC1L-208	ENST00000372826	ATP6V1A	P38606	617 aa		13.43	□□□□□ -0.26
PABPC1L-208	ENST00000372826	ITPK1	Q13572	414 aa		13.43	□□□□□ -0.26
PABPC1L-208	ENST00000372826	SLC27A3	Q5K4L6	730 aa		13.43	□□□□□ -0.26
PABPC1L-208	ENST00000372826	DNAJC10	Q8IXB1	793 aa		13.43	□□□□□ -0.26
PABPC1L-208	ENST00000372826	TEX13A	Q9BXU3	409 aa	Predicted RBP	13.43	□□□□□ -0.26
PABPC1L-208	ENST00000372826	CCNL1	Q9UK58	526 aa	Predicted RBP	13.43	□□□□□ -0.26
PABPC1L-208	ENST00000372826	COL5A3	P25940	1745 aa	Predicted RBP	13.42	□□□□□ -0.26
PABPC1L-208	ENST00000372826	KCNV2	Q8TDN2	545 aa		13.42	□□□□□ -0.26
PABPC1L-208	ENST00000372826	ZNF428	Q96B54	188 aa		13.42	□□□□□ -0.26
PABPC1L-208	ENST00000372826	CYP19A1	P11511	503 aa	Predicted RBP	13.41	□□□□□ -0.26
PABPC1L-208	ENST00000372826	PTGER2	P43116	358 aa		13.41	□□□□□ -0.26
PABPC1L-208	ENST00000372826	TXNRD1	Q16881	649 aa		13.41	□□□□□ -0.26
PABPC1L-208	ENST00000372826	HDGFL1	Q5TGJ6	251 aa		13.41	□□□□□ -0.26
PABPC1L-208	ENST00000372826	ZNF784	Q8NCA9	323 aa	Predicted RBP	13.41	□□□□□ -0.26
PABPC1L-208	ENST00000372826	CHMP4A	Q9BY43	222 aa		13.41	□□□□□ -0.26
PABPC1L-208	ENST00000372826	ANO8	Q9HCE9	1232 aa	Predicted RBP	13.41	□□□□□ -0.26
PABPC1L-208	ENST00000372826	LRRC4B	Q9NT99	713 aa		13.41	□□□□□ -0.26
PABPC1L-208	ENST00000372826	USP16	Q9Y5T5	823 aa		13.41	□□□□□ -0.26
PABPC1L-208	ENST00000372826	ERBB4	Q15303	1308 aa		13.4	□□□□□ -0.26
PABPC1L-208	ENST00000372826	ZBTB7A	O95365	584 aa		13.4	□□□□□ -0.26
PABPC1L-208	ENST00000372826	STARD3NL	O95772	234 aa		13.4	□□□□□ -0.26
PABPC1L-208	ENST00000372826	KCNQ4	P56696	695 aa		13.4	□□□□□ -0.26
PABPC1L-208	ENST00000372826	LINC00116	Q8NCU8	138 aa		13.4	□□□□□ -0.26
PABPC1L-208	ENST00000372826	STK32B	Q9NY57	414 aa		13.4	□□□□□ -0.26
PABPC1L-208	ENST00000372826	CNTNAP4	Q9C0A0	1308 aa		13.39	□□□□□ -0.27
PABPC1L-208	ENST00000372826	EIF2S2	P20042	333 aa	Known RBP	13.39	□□□□□ -0.27
PABPC1L-208	ENST00000372826	C1QBP	Q07021	282 aa	Known RBP	13.39	□□□□□ -0.27
PABPC1L-208	ENST00000372826	SLC15A2	Q16348	729 aa		13.39	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms