RNA–Protein interactions for RNA: ENST00000372484.7

CTSA-204, Transcript of cathepsin A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSA, Length 2,149 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-204ENST00000372484 HSP90AB1P08238 724 aaKnown RBP22.12■■□□□ 1.13
CTSA-204ENST00000372484 NBPF7P0C2Y1 421 aaPredicted RBP22.12■■□□□ 1.13
CTSA-204ENST00000372484 MAP3K2Q9Y2U5 619 aa22.12■■□□□ 1.13
CTSA-204ENST00000372484 TOM1L2Q6ZVM7 507 aa22.11■■□□□ 1.13
CTSA-204ENST00000372484 IBTKQ9P2D0 1353 aaPredicted RBP22.11■■□□□ 1.13
CTSA-204ENST00000372484 KSR2Q6VAB6 950 aa22.1■■□□□ 1.13
CTSA-204ENST00000372484 DDX21Q9NR30 783 aaKnown RBP eCLIP22.1■■□□□ 1.13
CTSA-204ENST00000372484 SDSP20132 328 aa22.1■■□□□ 1.13
CTSA-204ENST00000372484 SSH3Q8TE77 659 aa22.1■■□□□ 1.13
CTSA-204ENST00000372484 C5P01031 1676 aa22.1■■□□□ 1.13
CTSA-204ENST00000372484 MRC1P22897 1456 aa22.09■■□□□ 1.13
CTSA-204ENST00000372484 EIF5BO60841 1220 aaKnown RBP22.09■■□□□ 1.13
CTSA-204ENST00000372484 PDE1AP54750 535 aa22.09■■□□□ 1.13
CTSA-204ENST00000372484 PPP1R42Q7Z4L9 355 aa22.09■■□□□ 1.13
CTSA-204ENST00000372484 OSBPL3Q9H4L5 887 aa22.09■■□□□ 1.13
CTSA-204ENST00000372484 ABCA3Q99758 1704 aa22.09■■□□□ 1.13
CTSA-204ENST00000372484 TTC5Q8N0Z6 440 aa22.09■■□□□ 1.13
CTSA-204ENST00000372484 PARP4Q9UKK3 1724 aaKnown RBP22.09■■□□□ 1.13
CTSA-204ENST00000372484 COL5A2P05997 1499 aaPredicted RBP22.08■■□□□ 1.12
CTSA-204ENST00000372484 DDX58O95786 925 aaKnown RBP22.07■■□□□ 1.12
CTSA-204ENST00000372484 NFKBIBQ15653 356 aa22.07■■□□□ 1.12
CTSA-204ENST00000372484 ZNF496Q96IT1 587 aaPredicted RBP22.07■■□□□ 1.12
CTSA-204ENST00000372484 SLKQ9H2G2 1235 aaPredicted RBP22.07■■□□□ 1.12
CTSA-204ENST00000372484 ALDH1L1O75891 902 aa22.07■■□□□ 1.12
CTSA-204ENST00000372484 PDIA6Q15084 440 aa22.07■■□□□ 1.12
CTSA-204ENST00000372484 SRGAP3O43295 1099 aa22.06■■□□□ 1.12
CTSA-204ENST00000372484 CABP4P57796 275 aa22.06■■□□□ 1.12
CTSA-204ENST00000372484 AIMP1Q12904 312 aaKnown RBP22.06■■□□□ 1.12
CTSA-204ENST00000372484 POLA2Q14181 598 aa22.06■■□□□ 1.12
CTSA-204ENST00000372484 CASC1Q6TDU7 716 aa22.06■■□□□ 1.12
CTSA-204ENST00000372484 C9orf78Q9NZ63 289 aaPredicted RBP22.06■■□□□ 1.12
CTSA-204ENST00000372484 NHSL1Q5SYE7 1610 aa22.06■■□□□ 1.12
CTSA-204ENST00000372484 SALL3Q9BXA9 1300 aa22.05■■□□□ 1.12
CTSA-204ENST00000372484 SURF6O75683 361 aaKnown RBP22.04■■□□□ 1.12
CTSA-204ENST00000372484 MX1P20591 662 aa22.04■■□□□ 1.12
CTSA-204ENST00000372484 HSCBQ8IWL3 235 aa22.04■■□□□ 1.12
CTSA-204ENST00000372484 ZCRB1Q8TBF4 217 aaKnown RBP22.04■■□□□ 1.12
CTSA-204ENST00000372484 PCDH11XQ9BZA7 1347 aa22.04■■□□□ 1.12
CTSA-204ENST00000372484 PCDH11YQ9BZA8 1340 aa22.04■■□□□ 1.12
CTSA-204ENST00000372484 SNRPA1P09661 255 aaKnown RBP22.04■■□□□ 1.12
CTSA-204ENST00000372484 CWF19L2Q2TBE0 894 aaKnown RBP22.04■■□□□ 1.12
CTSA-204ENST00000372484 FMNL2Q96PY5 1086 aa22.04■■□□□ 1.12
CTSA-204ENST00000372484 RAB11FIP3O75154 756 aa22.03■■□□□ 1.12
CTSA-204ENST00000372484 MYL6BP14649 208 aa22.03■■□□□ 1.12
CTSA-204ENST00000372484 LINS1Q8NG48 757 aa22.03■■□□□ 1.12
CTSA-204ENST00000372484 STRN4Q9NRL3 753 aa22.03■■□□□ 1.12
CTSA-204ENST00000372484 TSHZ3Q63HK5 1081 aa22.02■■□□□ 1.12
CTSA-204ENST00000372484 KIF2CQ99661 725 aa22.02■■□□□ 1.12
CTSA-204ENST00000372484 CARD10Q9BWT7 1032 aa22.02■■□□□ 1.12
CTSA-204ENST00000372484 ANTXR1Q9H6X2 564 aa22.02■■□□□ 1.12
CTSA-204ENST00000372484 HDAC5Q9UQL6 1122 aa22.02■■□□□ 1.12
CTSA-204ENST00000372484 EVA1CP58658 441 aa22.01■■□□□ 1.11
CTSA-204ENST00000372484 RIC3Q7Z5B4 369 aa22.01■■□□□ 1.11
CTSA-204ENST00000372484 IL2RBP14784 551 aa22.01■■□□□ 1.11
CTSA-204ENST00000372484 IL1RAPL2Q9NP60 686 aa22.01■■□□□ 1.11
CTSA-204ENST00000372484 USP16Q9Y5T5 823 aa22.01■■□□□ 1.11
CTSA-204ENST00000372484 SPRYD3Q8NCJ5 442 aa22■■□□□ 1.11
CTSA-204ENST00000372484 SNX21Q969T3 373 aa22■■□□□ 1.11
CTSA-204ENST00000372484 XAGE3Q8WTP9 111 aa22■■□□□ 1.11
CTSA-204ENST00000372484 STAP2Q9UGK3 403 aa22■■□□□ 1.11
CTSA-204ENST00000372484 TUBGCP6Q96RT7 1819 aa21.99■■□□□ 1.11
CTSA-204ENST00000372484 MTX1Q13505 466 aa21.99■■□□□ 1.11
CTSA-204ENST00000372484 LARP1Q6PKG0 1096 aaKnown RBP21.99■■□□□ 1.11
CTSA-204ENST00000372484 COPS6Q7L5N1 327 aa21.99■■□□□ 1.11
CTSA-204ENST00000372484 GRM8O00222 908 aa21.98■■□□□ 1.11
CTSA-204ENST00000372484 HSP90AB4PQ58FF6 505 aa21.98■■□□□ 1.11
CTSA-204ENST00000372484 RHPN1Q8TCX5 695 aa21.98■■□□□ 1.11
CTSA-204ENST00000372484 KIF1BPQ96EK5 621 aa21.98■■□□□ 1.11
CTSA-204ENST00000372484 NEXNQ0ZGT2 675 aa21.98■■□□□ 1.11
CTSA-204ENST00000372484 USP26Q9BXU7 913 aa21.97■■□□□ 1.11
CTSA-204ENST00000372484 ERVV-2B6SEH9 535 aa21.96■■□□□ 1.11
CTSA-204ENST00000372484 FRAT2O75474 233 aaPredicted RBP21.96■■□□□ 1.11
CTSA-204ENST00000372484 REC8O95072 547 aa21.96■■□□□ 1.11
CTSA-204ENST00000372484 DDX54Q8TDD1 881 aaKnown RBP21.96■■□□□ 1.11
CTSA-204ENST00000372484 UTYO14607 1347 aa21.96■■□□□ 1.11
CTSA-204ENST00000372484 AOX1Q06278 1338 aa21.96■■□□□ 1.11
CTSA-204ENST00000372484 TRIM6-TRIM34B2RNG4 842 aa21.95■■□□□ 1.11
CTSA-204ENST00000372484 IGKV5-2P06315 115 aa21.95■■□□□ 1.11
CTSA-204ENST00000372484 PIP4K2AP48426 406 aaPredicted RBP21.95■■□□□ 1.11
CTSA-204ENST00000372484 NUTM1Q86Y26 1132 aa21.95■■□□□ 1.11
CTSA-204ENST00000372484 LAMB4A4D0S4 1761 aa21.95■■□□□ 1.1
CTSA-204ENST00000372484 ERC2O15083 957 aa21.95■■□□□ 1.1
CTSA-204ENST00000372484 DEKP35659 375 aaKnown RBP21.95■■□□□ 1.1
CTSA-204ENST00000372484 OS9Q13438 667 aaPredicted RBP21.95■■□□□ 1.1
CTSA-204ENST00000372484 ANKRD13DQ6ZTN6 518 aa21.95■■□□□ 1.1
CTSA-204ENST00000372484 LRP10Q7Z4F1 713 aa21.95■■□□□ 1.1
CTSA-204ENST00000372484 NKX1-1Q15270 411 aaPredicted RBP21.94■■□□□ 1.1
CTSA-204ENST00000372484 RILPL2Q969X0 211 aa21.94■■□□□ 1.1
CTSA-204ENST00000372484 METTL22Q9BUU2 404 aaPredicted RBP21.94■■□□□ 1.1
CTSA-204ENST00000372484 SHANK3Q9BYB0 1731 aa21.94■■□□□ 1.1
CTSA-204ENST00000372484 SUCLG2Q96I99 432 aa21.94■■□□□ 1.1
CTSA-204ENST00000372484 RBM42Q9BTD8 480 aaKnown RBP21.94■■□□□ 1.1
CTSA-204ENST00000372484 GLI3P10071 1580 aa21.93■■□□□ 1.1
CTSA-204ENST00000372484 NEURL1BA8MQ27 555 aa21.93■■□□□ 1.1
CTSA-204ENST00000372484 MYD88Q99836 296 aa21.93■■□□□ 1.1
CTSA-204ENST00000372484 BICC1Q9H694 974 aaKnown RBP21.92■■□□□ 1.1
CTSA-204ENST00000372484 GCKRQ14397 625 aa21.91■■□□□ 1.1
CTSA-204ENST00000372484 KAZALD1Q96I82 304 aa21.91■■□□□ 1.1
CTSA-204ENST00000372484 UBR2Q8IWV8 1755 aa21.91■■□□□ 1.1
CTSA-204ENST00000372484 BTG4Q9NY30 223 aa21.91■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms