RNA–Protein interactions for RNA: ENST00000371248.3

VPS37B-202, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 2,088 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-202ENST00000371248 PROM2Q8N271 834 aa22.64■■□□□ 1.21
VPS37B-202ENST00000371248 CHMP4AQ9BY43 222 aa22.64■■□□□ 1.21
VPS37B-202ENST00000371248 COL5A3P25940 1745 aaPredicted RBP22.63■■□□□ 1.21
VPS37B-202ENST00000371248 SSH1Q8WYL5 1049 aa22.63■■□□□ 1.21
VPS37B-202ENST00000371248 LRRC4BQ9NT99 713 aa22.63■■□□□ 1.21
VPS37B-202ENST00000371248 RGPD3A6NKT7 1758 aaPredicted RBP22.63■■□□□ 1.21
VPS37B-202ENST00000371248 RGPD4Q7Z3J3 1758 aa22.63■■□□□ 1.21
VPS37B-202ENST00000371248 CYP19A1P11511 503 aaPredicted RBP22.62■■□□□ 1.21
VPS37B-202ENST00000371248 EN1Q05925 392 aaPredicted RBP22.62■■□□□ 1.21
VPS37B-202ENST00000371248 SLC27A3Q5K4L6 730 aa22.62■■□□□ 1.21
VPS37B-202ENST00000371248 BCL2L13Q9BXK5 485 aa22.62■■□□□ 1.21
VPS37B-202ENST00000371248 CACNA1FO60840 1977 aa22.62■■□□□ 1.21
VPS37B-202ENST00000371248 BAG6P46379 1132 aa22.62■■□□□ 1.21
VPS37B-202ENST00000371248 A1BGP04217 495 aa22.61■■□□□ 1.21
VPS37B-202ENST00000371248 ALDH1L2Q3SY69 923 aa22.61■■□□□ 1.21
VPS37B-202ENST00000371248 LINC00116Q8NCU8 138 aa22.61■■□□□ 1.21
VPS37B-202ENST00000371248 STK31Q9BXU1 1019 aa22.61■■□□□ 1.21
VPS37B-202ENST00000371248 CHPF2Q9P2E5 772 aa22.61■■□□□ 1.21
VPS37B-202ENST00000371248 MYH14Q7Z406 1995 aaKnown RBP22.61■■□□□ 1.21
VPS37B-202ENST00000371248 SMC4Q9NTJ3 1288 aa22.61■■□□□ 1.21
VPS37B-202ENST00000371248 BCAR3O75815 825 aa22.6■■□□□ 1.21
VPS37B-202ENST00000371248 PIP4K2AP48426 406 aaPredicted RBP22.6■■□□□ 1.21
VPS37B-202ENST00000371248 DEFB132Q7Z7B7 95 aa22.6■■□□□ 1.21
VPS37B-202ENST00000371248 SLC4A2P04920 1241 aa22.59■■□□□ 1.21
VPS37B-202ENST00000371248 EZH2Q15910 746 aaKnown RBP22.59■■□□□ 1.21
VPS37B-202ENST00000371248 CAMKK2Q96RR4 588 aa22.59■■□□□ 1.21
VPS37B-202ENST00000371248 DBF4Q9UBU7 674 aaPredicted RBP22.59■■□□□ 1.21
VPS37B-202ENST00000371248 ANXA1P04083 346 aa22.59■■□□□ 1.21
VPS37B-202ENST00000371248 UPF1Q92900 1129 aaKnown RBP eCLIP22.59■■□□□ 1.21
VPS37B-202ENST00000371248 CRKLP46109 303 aaKnown RBP22.58■■□□□ 1.21
VPS37B-202ENST00000371248 PDIA6Q15084 440 aa22.58■■□□□ 1.21
VPS37B-202ENST00000371248 MYL6BP14649 208 aa22.58■■□□□ 1.2
VPS37B-202ENST00000371248 PROSER3Q2NL68 480 aa22.58■■□□□ 1.2
VPS37B-202ENST00000371248 MRPL50Q8N5N7 158 aaKnown RBP22.58■■□□□ 1.2
VPS37B-202ENST00000371248 DDX21Q9NR30 783 aaKnown RBP eCLIP22.58■■□□□ 1.2
VPS37B-202ENST00000371248 NBPF26B4DH59 902 aa22.57■■□□□ 1.2
VPS37B-202ENST00000371248 NBPF14Q5TI25 921 aa22.57■■□□□ 1.2
VPS37B-202ENST00000371248 NBPF10Q6P3W6 841 aaKnown RBP22.57■■□□□ 1.2
VPS37B-202ENST00000371248 NBPF15Q8N660 670 aa22.57■■□□□ 1.2
VPS37B-202ENST00000371248 CANXP27824 592 aaKnown RBP22.56■■□□□ 1.2
VPS37B-202ENST00000371248 ERBB4Q15303 1308 aa22.56■■□□□ 1.2
VPS37B-202ENST00000371248 INTS5Q6P9B9 1019 aaKnown RBP22.56■■□□□ 1.2
VPS37B-202ENST00000371248 CCDC87Q9NVE4 849 aa22.56■■□□□ 1.2
VPS37B-202ENST00000371248 ZBTB1Q9Y2K1 713 aa22.56■■□□□ 1.2
VPS37B-202ENST00000371248 C4BP0C0L5 1744 aa22.56■■□□□ 1.2
VPS37B-202ENST00000371248 RREB1Q92766 1687 aa22.54■■□□□ 1.2
VPS37B-202ENST00000371248 CNTNAP4Q9C0A0 1308 aa22.54■■□□□ 1.2
VPS37B-202ENST00000371248 G2E3Q7L622 706 aa22.54■■□□□ 1.2
VPS37B-202ENST00000371248 PHAXQ9H814 394 aaKnown RBP22.54■■□□□ 1.2
VPS37B-202ENST00000371248 HYPKQ9NX55 129 aa22.54■■□□□ 1.2
VPS37B-202ENST00000371248 HMGB2P26583 209 aaKnown RBP22.53■■□□□ 1.2
VPS37B-202ENST00000371248 RC3H1Q5TC82 1133 aaKnown RBP22.53■■□□□ 1.2
VPS37B-202ENST00000371248 ZNF330Q9Y3S2 320 aaPredicted RBP22.53■■□□□ 1.2
VPS37B-202ENST00000371248 BRPF1P55201 1214 aaPredicted RBP22.53■■□□□ 1.2
VPS37B-202ENST00000371248 FRAT1Q92837 279 aaPredicted RBP22.52■■□□□ 1.2
VPS37B-202ENST00000371248 LRP10Q7Z4F1 713 aa22.51■■□□□ 1.19
VPS37B-202ENST00000371248 NOB1Q9ULX3 412 aaKnown RBP22.51■■□□□ 1.19
VPS37B-202ENST00000371248 SUPT16HQ9Y5B9 1047 aaKnown RBP22.51■■□□□ 1.19
VPS37B-202ENST00000371248 PRKCSHP14314 528 aaPredicted RBP22.51■■□□□ 1.19
VPS37B-202ENST00000371248 IL6STP40189 918 aaPredicted RBP22.51■■□□□ 1.19
VPS37B-202ENST00000371248 AIMP1Q12904 312 aaKnown RBP22.51■■□□□ 1.19
VPS37B-202ENST00000371248 AK7Q96M32 723 aa22.51■■□□□ 1.19
VPS37B-202ENST00000371248 GNPATO15228 680 aa22.5■■□□□ 1.19
VPS37B-202ENST00000371248 FLIIQ13045 1269 aa22.5■■□□□ 1.19
VPS37B-202ENST00000371248 COPS6Q7L5N1 327 aa22.5■■□□□ 1.19
VPS37B-202ENST00000371248 KIF16BQ96L93 1317 aa22.49■■□□□ 1.19
VPS37B-202ENST00000371248 NUP188Q5SRE5 1749 aa22.49■■□□□ 1.19
VPS37B-202ENST00000371248 NPM2Q86SE8 214 aaKnown RBP22.49■■□□□ 1.19
VPS37B-202ENST00000371248 XAGE3Q8WTP9 111 aa22.49■■□□□ 1.19
VPS37B-202ENST00000371248 RPS6KA4O75676 772 aa22.48■■□□□ 1.19
VPS37B-202ENST00000371248 EIF5P55010 431 aaKnown RBP22.48■■□□□ 1.19
VPS37B-202ENST00000371248 UBR3Q6ZT12 1888 aa22.48■■□□□ 1.19
VPS37B-202ENST00000371248 PLIN1O60240 522 aa22.48■■□□□ 1.19
VPS37B-202ENST00000371248 ARXQ96QS3 562 aa22.48■■□□□ 1.19
VPS37B-202ENST00000371248 RTCBQ9Y3I0 505 aaKnown RBP22.48■■□□□ 1.19
VPS37B-202ENST00000371248 FKBP5Q13451 457 aaPredicted RBP22.47■■□□□ 1.19
VPS37B-202ENST00000371248 SMIM5Q71RC9 77 aa22.47■■□□□ 1.19
VPS37B-202ENST00000371248 IPO8O15397 1037 aaKnown RBP22.46■■□□□ 1.19
VPS37B-202ENST00000371248 ZNF827Q17R98 1081 aa22.46■■□□□ 1.19
VPS37B-202ENST00000371248 TTLL7Q6ZT98 887 aa22.46■■□□□ 1.19
VPS37B-202ENST00000371248 AMIGO3Q86WK7 504 aa22.46■■□□□ 1.19
VPS37B-202ENST00000371248 AKT1S1Q96B36 256 aa22.46■■□□□ 1.19
VPS37B-202ENST00000371248 PTPRCP08575 1304 aa22.46■■□□□ 1.19
VPS37B-202ENST00000371248 ZKSCAN2Q63HK3 967 aa22.45■■□□□ 1.18
VPS37B-202ENST00000371248 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.45■■□□□ 1.18
VPS37B-202ENST00000371248 COL15A1P39059 1388 aa22.45■■□□□ 1.18
VPS37B-202ENST00000371248 RRP1P56182 461 aaKnown RBP22.45■■□□□ 1.18
VPS37B-202ENST00000371248 PHF14O94880 888 aa22.44■■□□□ 1.18
VPS37B-202ENST00000371248 ARHGAP45Q92619 1136 aa22.44■■□□□ 1.18
VPS37B-202ENST00000371248 TFCP2L1Q9NZI6 479 aa22.44■■□□□ 1.18
VPS37B-202ENST00000371248 TBC1D2BQ9UPU7 963 aa22.44■■□□□ 1.18
VPS37B-202ENST00000371248 DDX58O95786 925 aaKnown RBP22.43■■□□□ 1.18
VPS37B-202ENST00000371248 ATF7IPQ6VMQ6 1270 aa22.43■■□□□ 1.18
VPS37B-202ENST00000371248 ANKRD13DQ6ZTN6 518 aa22.43■■□□□ 1.18
VPS37B-202ENST00000371248 TUBGCP6Q96RT7 1819 aa22.43■■□□□ 1.18
VPS37B-202ENST00000371248 DZIP3Q86Y13 1208 aaKnown RBP22.43■■□□□ 1.18
VPS37B-202ENST00000371248 ANO8Q9HCE9 1232 aaPredicted RBP22.43■■□□□ 1.18
VPS37B-202ENST00000371248 TNNQ9UQP3 1299 aa22.43■■□□□ 1.18
VPS37B-202ENST00000371248 PI4KAP2A4QPH2 592 aa22.42■■□□□ 1.18
VPS37B-202ENST00000371248 TRIM27P14373 513 aa22.42■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms